Query gi|254780454|ref|YP_003064867.1| DNA polymerase III subunit beta [Candidatus Liberibacter asiaticus str. psy62] Match_columns 385 No_of_seqs 121 out of 2231 Neff 8.0 Searched_HMMs 13730 Date Wed Jun 1 06:01:32 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780454.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1vpka3 d.131.1.1 (A:244-366) 100.0 3.7E-31 2.7E-35 205.3 16.4 122 250-385 1-122 (123) 2 d1ok7a3 d.131.1.1 (A:245-366) 100.0 6.5E-31 4.7E-35 203.8 15.3 122 250-385 1-122 (122) 3 d1vpka2 d.131.1.1 (A:121-243) 100.0 2.4E-31 1.7E-35 206.4 8.6 121 125-249 2-123 (123) 4 d1ok7a1 d.131.1.1 (A:1-122) DN 100.0 1.3E-29 9.5E-34 195.9 17.0 121 1-124 1-122 (122) 5 d1ok7a2 d.131.1.1 (A:123-244) 100.0 1.5E-31 1.1E-35 207.6 7.0 121 126-249 2-122 (122) 6 d1vpka1 d.131.1.1 (A:1-120) DN 100.0 1.6E-27 1.1E-31 183.3 14.3 118 1-122 1-119 (120) 7 d1vpka2 d.131.1.1 (A:121-243) 99.3 7.5E-11 5.5E-15 82.1 15.7 115 2-120 6-122 (123) 8 d1vpka1 d.131.1.1 (A:1-120) DN 99.3 3.1E-12 2.3E-16 90.5 7.9 116 129-249 2-118 (120) 9 d1ok7a1 d.131.1.1 (A:1-122) DN 99.1 8.9E-11 6.5E-15 81.6 8.7 118 129-250 2-120 (122) 10 d1ok7a2 d.131.1.1 (A:123-244) 99.1 3.8E-09 2.7E-13 71.8 16.7 116 2-121 5-122 (122) 11 d1vpka3 d.131.1.1 (A:244-366) 98.2 4.8E-05 3.5E-09 46.8 13.6 106 2-114 11-119 (123) 12 d1ok7a3 d.131.1.1 (A:245-366) 98.0 0.00015 1.1E-08 43.8 13.9 95 2-103 11-107 (122) 13 d1rwza2 d.131.1.2 (A:123-244) 98.0 0.00026 1.9E-08 42.3 14.4 111 256-382 4-118 (122) 14 d1plqa2 d.131.1.2 (A:127-258) 98.0 0.00039 2.9E-08 41.3 15.0 101 253-363 2-115 (132) 15 d1iz5a2 d.131.1.2 (A:126-246) 97.9 0.00026 1.9E-08 42.4 13.7 110 256-382 4-120 (121) 16 d1u7ba2 d.131.1.2 (A:127-255) 97.9 0.00025 1.8E-08 42.5 13.5 113 253-382 2-127 (129) 17 d1ud9a2 d.131.1.2 (A:127-245) 97.6 0.0019 1.4E-07 37.1 14.8 109 256-382 1-116 (119) 18 d1rwza1 d.131.1.2 (A:1-122) Pr 97.5 0.0028 2E-07 36.2 14.5 110 2-122 3-120 (122) 19 d1iz5a1 d.131.1.2 (A:2-120) Pr 95.9 0.042 3.1E-06 29.0 11.5 86 31-116 24-118 (119) 20 d1ud9a1 d.131.1.2 (A:1-119) Pr 94.7 0.11 7.8E-06 26.5 11.9 81 264-352 7-93 (119) 21 d1plqa1 d.131.1.2 (A:1-126) Pr 94.7 0.11 7.8E-06 26.5 11.9 79 6-93 8-94 (126) 22 d1u7ba1 d.131.1.2 (A:1-126) Pr 92.3 0.28 2E-05 24.0 12.5 79 6-93 8-94 (126) 23 d2fa8a1 c.47.1.23 (A:4-89) Hyp 52.3 2 0.00015 18.8 0.8 49 205-253 23-72 (86) 24 d2qdya1 d.149.1.1 (A:10-206) I 22.9 16 0.0012 13.3 1.5 10 199-208 130-139 (197) No 1 >d1vpka3 d.131.1.1 (A:244-366) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]} Probab=99.97 E-value=3.7e-31 Score=205.28 Aligned_cols=122 Identities=24% Similarity=0.467 Sum_probs=116.2 Q ss_pred CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEEEECCCCEEEEECHHHH Q ss_conf 10135556617998489988889887410123555302565176599998078732689999989628843999638899 Q gi|254780454|r 250 QNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYL 329 (385) Q Consensus 250 ~~vip~~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~~~~G~~~~i~fN~~yl 329 (385) ++|||++++++++++|.+|++||+|+++++++++++|+|+|+++++++++.++|.|++.|+++++|+|++++|+||++|| T Consensus 1 ~~viP~~~~~~v~v~r~~l~~al~Rv~~~s~~~~~~V~l~~~~~~l~l~s~~~e~g~~~e~i~~~~~Ge~~~i~fN~~yL 80 (123) T d1vpka3 1 KRVIPETFKTKVVVSRKELRESLKRVMVIASKGSESVKFEIEENVMRLVSKSPDYGEVVDEVEVQKEGEDLVIAFNPKFI 80 (123) T ss_dssp GGGSCSCCSEEEEEEHHHHHHHHHHHHHHHTTTTCCEEEEECSSEEEEEEEETTTEEEEEEEECEEEECCEEEEECHHHH T ss_pred CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEEECHHHH T ss_conf 95069999879999999999999999988437776358996388148886266520004110100257776999889999 Q ss_pred HHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEC Q ss_conf 88987357533466338999658987589943776544455566763799832129 Q gi|254780454|r 330 LEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385 (385) Q Consensus 330 ~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMPvri 385 (385) +|+|+++++ ++|.|+|.++.+|++|++.++ .+|+|||||||| T Consensus 81 ~d~L~~~~~-----~~V~l~~~~~~~p~~i~~~~~---------~~~~~liMP~ri 122 (123) T d1vpka3 81 EDVLKHIET-----EEIEMNFVDSTSPCQINPLDI---------SGYLYIVMPIRL 122 (123) T ss_dssp HHHHHHCCS-----SEEEEEESCTTSCEEEEETTC---------CSEEEEECCBCC T ss_pred HHHHHHCCC-----CEEEEEECCCCCCEEEECCCC---------CCEEEEEEEEEC T ss_conf 999954789-----879999868999889963899---------953899984881 No 2 >d1ok7a3 d.131.1.1 (A:245-366) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Probab=99.97 E-value=6.5e-31 Score=203.82 Aligned_cols=122 Identities=35% Similarity=0.602 Sum_probs=116.2 Q ss_pred CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEEEECCCCEEEEECHHHH Q ss_conf 10135556617998489988889887410123555302565176599998078732689999989628843999638899 Q gi|254780454|r 250 QNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYL 329 (385) Q Consensus 250 ~~vip~~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~~~~G~~~~i~fN~~yl 329 (385) ++|||+++++++.++|++|+++++|++++++++++.|+|+|+++++++++.+++.|++.|+++++|+|++++|+||++|| T Consensus 1 rrvIP~~~~~~i~v~r~el~~al~R~s~~~~~~~~~v~l~~~~~~l~lss~~~e~g~~~e~i~~~~~G~~~~I~fN~~yL 80 (122) T d1ok7a3 1 RRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYV 80 (122) T ss_dssp GGTSCSCCCEEEEEEHHHHHHHHHHHHTTSCTTSCEEEEEEETTEEEEEEECTTCCEEEEEEECBCCSCCEEEEEEHHHH T ss_pred CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECHHHH T ss_conf 96108999889999899999999999988517885599998377039997575543044787313588448999999999 Q ss_pred HHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEC Q ss_conf 88987357533466338999658987589943776544455566763799832129 Q gi|254780454|r 330 LEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385 (385) Q Consensus 330 ~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMPvri 385 (385) +|+|+++++ ++|+|.|+++.+|++|++.++ .+|+|||||||| T Consensus 81 ~d~L~~~~~-----~~i~i~~~~~~~p~~i~~~~d---------~~~~~liMP~rl 122 (122) T d1ok7a3 81 LDVLNALKC-----ENVRMMLTDSVSSVQIEDAAS---------QSAAYVVMPMRL 122 (122) T ss_dssp HHHHHHHCS-----SEEEEEECCTTSCEEEEETTE---------EEEEEEECCCCC T ss_pred HHHHHCCCC-----CEEEEEECCCCCCEEEECCCC---------CCEEEEEEEEEC T ss_conf 999960799-----879999838999789857999---------956899980469 No 3 >d1vpka2 d.131.1.1 (A:121-243) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]} Probab=99.97 E-value=2.4e-31 Score=206.43 Aligned_cols=121 Identities=32% Similarity=0.587 Sum_probs=110.8 Q ss_pred CCCEEEECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCH Q ss_conf 24304505611355420220230024556521011667761787348999853415766664357875331000001000 Q gi|254780454|r 125 EYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKA 204 (385) Q Consensus 125 ~~~~~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~ 204 (385) +++.+|+|+++.|+++|++|.||+|+|++||+|+||+|++.++ ++++|||||||||+++.+++.+ .+.++|||+|+ T Consensus 2 e~~~~f~i~~~~L~~~I~~v~fA~s~d~~r~~L~Gv~~~~~~~--~l~~vATDg~RLa~~~~~~~~~--~~~~~iiP~k~ 77 (123) T d1vpka2 2 ESGITFEVDTSLLEEMVEKVIFAAAKDEFMRNLNGVFWELHKN--LLRLVASDGFRLALAEEQIENE--EEASFLLSLKS 77 (123) T ss_dssp CSSEEEEEEHHHHHHHHHHHGGGSCCCTTCTTTSEEEEEEETT--EEEEEEECSSEEEEEEEECCCC--SCEEEEEEHHH T ss_pred CCCEEEEECHHHHHHHHHHEEEEECCCCCCCEEEEEEEEEECC--CEEEEEEEEEEEEEEEHHCCCC--CCCCEEEEECH T ss_conf 9865999989999999845649952678621287689998468--3489998512532230120247--76527986213 Q ss_pred HHHHHHHCCCC-CCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCC Q ss_conf 12222102776-4643313345530100250699985126655322 Q gi|254780454|r 205 VGEILRILSSK-DSSVKVSLSESRIHLNIESLSMSVRLIDGEFPNY 249 (385) Q Consensus 205 l~el~k~l~~~-~~~v~i~~~~~~i~~~~~~~~~~srLi~g~yPdy 249 (385) +.++.|++.+. +++|+++++++++.|.+++.++.||||+|+|||| T Consensus 78 l~el~k~l~~~~~~~v~i~~~~~~i~~~~~~~~~~srlieG~fPdY 123 (123) T d1vpka2 78 MKEVQNVLDNTTEPTITVRYDGRRVSLSTNDVETVMRVVDAEFPDY 123 (123) T ss_dssp HHHHHHHHHTCCCSEEEEEECSSEEEEECSSEEEEEECCSSCCCCG T ss_pred HHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEEEEEECCCCCCC T ss_conf 5677765200356269999789899999899999997647538797 No 4 >d1ok7a1 d.131.1.1 (A:1-122) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Probab=99.97 E-value=1.3e-29 Score=195.89 Aligned_cols=121 Identities=31% Similarity=0.517 Sum_probs=114.5 Q ss_pred CEEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEE-EEECCCCEEEEEHHHHHHHHH Q ss_conf 9589859999999998750203788861013389999899799999678289999997-775268079994998778874 Q gi|254780454|r 1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-ASVDVCGSITVSAHLLYDIVR 79 (385) Q Consensus 1 Mk~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~-~~i~~~G~~~v~a~~l~~iik 79 (385) |||+|+|++|.++|+++++++++|++.|||+|+||++++++|+++|||++++++++++ ++++++|+++||||.|.+++| T Consensus 1 Mkf~i~k~~L~~aL~~v~~~v~~k~~~PiL~~vli~~~~~~l~l~aTDle~~i~~~i~~~~v~~~G~~~vpak~l~divr 80 (122) T d1ok7a1 1 MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICR 80 (122) T ss_dssp CEEEEEHHHHHHHHHHHHCSCCSCCSSGGGGEEEEEEETTEEEEEEECSSEEEEEEEECCSCCBCEEEEEEHHHHHHHHH T ss_pred CEEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCEEEEEEECCCEEEEEEEEECCCCCCCEEEEEEHHHHHHHH T ss_conf 98999899999999999736078987046535899998999999995477389999975155778779971188899997 Q ss_pred CCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCC Q ss_conf 077777304777336750899986782024303662114321233 Q gi|254780454|r 80 KLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTKEE 124 (385) Q Consensus 80 ~L~~~~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~~~~~ 124 (385) +||++..+.+..++ +++.|++|+++|+|+++|+++||.+|++ T Consensus 81 ~lp~~~~i~~~~~~---~~l~i~~~~~~f~l~~~~~~~fP~ipef 122 (122) T d1ok7a1 81 GLPEGAEIAVQLEG---ERMLVRSGRSRFSLSTLPAADFPNLDDW 122 (122) T ss_dssp HSCTTCEEEEEEET---TEEEEEETTEEEEEECBCGGGSCCCCCC T ss_pred HCCCCCCEEEEECC---CEEEEEECCEEEEECCCCHHHCCCCCCC T ss_conf 49999818999659---9899998965999726797888899999 No 5 >d1ok7a2 d.131.1.1 (A:123-244) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Probab=99.97 E-value=1.5e-31 Score=207.63 Aligned_cols=121 Identities=40% Similarity=0.737 Sum_probs=110.6 Q ss_pred CCEEEECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCHH Q ss_conf 43045056113554202202300245565210116677617873489998534157666643578753310000010001 Q gi|254780454|r 126 YVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAV 205 (385) Q Consensus 126 ~~~~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~l 205 (385) ....++|+++.|+++|++|.||+|+|++||+|+||+|+++++ ++.+|||||||||+++.+++... ...+++||+|.+ T Consensus 2 ~~~~~~i~~~~l~~~i~~t~~A~s~de~r~~L~Gv~~~~~~~--~l~~vATDg~RLa~~~~~~~~~~-~~~~~iip~k~l 78 (122) T d1ok7a2 2 SEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGHRLAVCSMPIGQSL-PSHSVIVPRKGV 78 (122) T ss_dssp EEEEEEEEHHHHHHHHHHHGGGSCSSCSSGGGSEEEEEEEEE--EEEEEEECSSEEEEEEEEEEEEE-EEEEEEEEHHHH T ss_pred CCEEEEECHHHHHHHHHHEEEEEECCCCCCEEEEEEEEEECC--CEEEEECCCCEEEEEEEECCCCC-CCCCCCCCHHHH T ss_conf 855999989999999844758971577731047689998088--04899816848788886147775-533321341678 Q ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCC Q ss_conf 22221027764643313345530100250699985126655322 Q gi|254780454|r 206 GEILRILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDGEFPNY 249 (385) Q Consensus 206 ~el~k~l~~~~~~v~i~~~~~~i~~~~~~~~~~srLi~g~yPdy 249 (385) .++.+++.+.++.|++.++++++.|.+++.+++||||+|+|||| T Consensus 79 ~el~~~l~~~~~~v~i~~~~~~i~f~~~~~~~~srlIeG~fPdY 122 (122) T d1ok7a2 79 IELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDY 122 (122) T ss_dssp HHHHHTCCCCSSEEEEEEESSEEEEEETTEEEEEECCCSCCCCG T ss_pred HHHHHHHCCCCCEEEEEECCCEEEEEECCEEEEEEEECCCCCCC T ss_conf 88877641676248897468708999899999998846338698 No 6 >d1vpka1 d.131.1.1 (A:1-120) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]} Probab=99.95 E-value=1.6e-27 Score=183.27 Aligned_cols=118 Identities=24% Similarity=0.405 Sum_probs=110.8 Q ss_pred CEEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEE-EEECCCCEEEEEHHHHHHHHH Q ss_conf 9589859999999998750203788861013389999899799999678289999997-775268079994998778874 Q gi|254780454|r 1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-ASVDVCGSITVSAHLLYDIVR 79 (385) Q Consensus 1 Mk~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~-~~i~~~G~~~v~a~~l~~iik 79 (385) |||+|++++|.++|+++++++++|++.|||+|+||++++++|+++|||++++++++++ ++++++|+++|||+.|.+++| T Consensus 1 Mk~~i~~~~L~~al~~v~~~i~~~~~~piL~~ili~~~~~~l~l~aTD~e~~i~~~i~~~~i~~~G~~~vpak~l~~iir 80 (120) T d1vpka1 1 MKVTVTTLELKDKITIASKALAKKSVKPILAGFLFEVKDGNFYICATDLETGVKATVNAAEISGEARFVVPGDVIQKMVK 80 (120) T ss_dssp EEEEEEHHHHHHHHHHHGGGCCCSSSCGGGGEEEEEEETTEEEEEEECSSEEEEEECCCSEEEECEEEEEEC-CHHHHHT T ss_pred CEEEEEHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCEEEEEEEECEEEEEEEECCCCEEECCCCHHHHHHHHHHHH T ss_conf 98999899999999999877268986267657699998999999995030357898046410001101034567999984 Q ss_pred CCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCC Q ss_conf 0777773047773367508999867820243036621143212 Q gi|254780454|r 80 KLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTK 122 (385) Q Consensus 80 ~L~~~~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~~~ 122 (385) +||++ .+.+..+ ++++.|++++++|+++++|+++||.+| T Consensus 81 ~lp~~-~v~l~~~---~~~l~I~~~~~~~~l~~~~~~~fP~ip 119 (120) T d1vpka1 81 VLPDE-ITELSLE---GDALVISSGSTVFRITTMPADEFPEIT 119 (120) T ss_dssp TCCSS-EEEEEEE---TTEEEEEETTEEEEEECBCCTTSCCCC T ss_pred HCCCC-CEEEEEE---CCEEEEEECCEEEEECCCCHHHCCCCC T ss_conf 39998-5899970---999999989849997488977877987 No 7 >d1vpka2 d.131.1.1 (A:121-243) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]} Probab=99.32 E-value=7.5e-11 Score=82.08 Aligned_cols=115 Identities=17% Similarity=0.177 Sum_probs=97.6 Q ss_pred EEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEEEEECCCCEEEEEHHHHHHHHHCC Q ss_conf 58985999999999875020378886101338999989979999967828999999777526807999499877887407 Q gi|254780454|r 2 KITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVDVCGSITVSAHLLYDIVRKL 81 (385) Q Consensus 2 k~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~~~i~~~G~~~v~a~~l~~iik~L 81 (385) +|+|+.+.|.++|+.+.-+++...+.|+|.|++++..++++.+.|||+-.-.....+.+..++++++||+|.+.++.|-+ T Consensus 6 ~f~i~~~~L~~~I~~v~fA~s~d~~r~~L~Gv~~~~~~~~l~~vATDg~RLa~~~~~~~~~~~~~~iiP~k~l~el~k~l 85 (123) T d1vpka2 6 TFEVDTSLLEEMVEKVIFAAAKDEFMRNLNGVFWELHKNLLRLVASDGFRLALAEEQIENEEEASFLLSLKSMKEVQNVL 85 (123) T ss_dssp EEEEEHHHHHHHHHHHGGGSCCCTTCTTTSEEEEEEETTEEEEEEECSSEEEEEEEECCCCSCEEEEEEHHHHHHHHHHH T ss_pred EEEECHHHHHHHHHHEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEEEEEEEEEHHCCCCCCCCEEEEECHHHHHHHHH T ss_conf 99998999999984564995267862128768999846834899985125322301202477652798621356777652 Q ss_pred CCCC--CEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCC Q ss_conf 7777--30477733675089998678202430366211432 Q gi|254780454|r 82 QDGA--QISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120 (385) Q Consensus 82 ~~~~--~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~ 120 (385) ++.. .+.+..+ ++++.+++++..+.....+. .||. T Consensus 86 ~~~~~~~v~i~~~---~~~i~~~~~~~~~~srlieG-~fPd 122 (123) T d1vpka2 86 DNTTEPTITVRYD---GRRVSLSTNDVETVMRVVDA-EFPD 122 (123) T ss_dssp HTCCCSEEEEEEC---SSEEEEECSSEEEEEECCSS-CCCC T ss_pred CCCCCCEEEEEEC---CCEEEEEECCEEEEEEEECC-CCCC T ss_conf 0035626999978---98999998999999976475-3879 No 8 >d1vpka1 d.131.1.1 (A:1-120) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]} Probab=99.31 E-value=3.1e-12 Score=90.47 Aligned_cols=116 Identities=20% Similarity=0.352 Sum_probs=97.1 Q ss_pred EEECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCHHHHH Q ss_conf 45056113554202202300245565210116677617873489998534157666643578753310000010001222 Q gi|254780454|r 129 SFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEI 208 (385) Q Consensus 129 ~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~l~el 208 (385) .|.++...|.++|+++..++++..++|+|+||+|+.+++ .+++.|||+-+-...+++. ....++..++||+|.+.++ T Consensus 2 k~~i~~~~L~~al~~v~~~i~~~~~~piL~~ili~~~~~--~l~l~aTD~e~~i~~~i~~-~~i~~~G~~~vpak~l~~i 78 (120) T d1vpka1 2 KVTVTTLELKDKITIASKALAKKSVKPILAGFLFEVKDG--NFYICATDLETGVKATVNA-AEISGEARFVVPGDVIQKM 78 (120) T ss_dssp EEEEEHHHHHHHHHHHGGGCCCSSSCGGGGEEEEEEETT--EEEEEEECSSEEEEEECCC-SEEEECEEEEEEC-CHHHH T ss_pred EEEEEHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECC--EEEEEEEECEEEEEEEECC-CCEEECCCCHHHHHHHHHH T ss_conf 899989999999999987726898626765769999899--9999995030357898046-4100011010345679999 Q ss_pred HHHCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCC-CCCCC Q ss_conf 210277646433133455301002506999851266-55322 Q gi|254780454|r 209 LRILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDG-EFPNY 249 (385) Q Consensus 209 ~k~l~~~~~~v~i~~~~~~i~~~~~~~~~~srLi~g-~yPdy 249 (385) .|-+++ +.|++...++++.+++++..|..+++++ .||+. T Consensus 79 ir~lp~--~~v~l~~~~~~l~I~~~~~~~~l~~~~~~~fP~i 118 (120) T d1vpka1 79 VKVLPD--EITELSLEGDALVISSGSTVFRITTMPADEFPEI 118 (120) T ss_dssp HTTCCS--SEEEEEEETTEEEEEETTEEEEEECBCCTTSCCC T ss_pred HHHCCC--CCEEEEEECCEEEEEECCEEEEECCCCHHHCCCC T ss_conf 843999--8589997099999998984999748897787798 No 9 >d1ok7a1 d.131.1.1 (A:1-122) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Probab=99.15 E-value=8.9e-11 Score=81.62 Aligned_cols=118 Identities=19% Similarity=0.262 Sum_probs=98.0 Q ss_pred EEECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCHHHHH Q ss_conf 45056113554202202300245565210116677617873489998534157666643578753310000010001222 Q gi|254780454|r 129 SFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEI 208 (385) Q Consensus 129 ~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~l~el 208 (385) .|.++.+.|.+++..+..++++..+.|+|.||+++.+++ .+.+.|||+.+-...+++.. ...++..++||+|.+.++ T Consensus 2 kf~i~k~~L~~aL~~v~~~v~~k~~~PiL~~vli~~~~~--~l~l~aTDle~~i~~~i~~~-~v~~~G~~~vpak~l~di 78 (122) T d1ok7a1 2 KFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADG--TLSLTGTDLEMEMVARVALV-QPHEPGATTVPARKFFDI 78 (122) T ss_dssp EEEEEHHHHHHHHHHHHCSCCSCCSSGGGGEEEEEEETT--EEEEEEECSSEEEEEEEECC-SCCBCEEEEEEHHHHHHH T ss_pred EEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEECC--EEEEEEECCCEEEEEEEEEC-CCCCCCEEEEEEHHHHHH T ss_conf 899989999999999973607898704653589999899--99999954773899999751-557787799711888999 Q ss_pred HHHCCCCCCCCCCCCCCCCEEEECCEEEEEEEECC-CCCCCCC Q ss_conf 21027764643313345530100250699985126-6553221 Q gi|254780454|r 209 LRILSSKDSSVKVSLSESRIHLNIESLSMSVRLID-GEFPNYQ 250 (385) Q Consensus 209 ~k~l~~~~~~v~i~~~~~~i~~~~~~~~~~srLi~-g~yPdy~ 250 (385) .|-++++ ..+.+..+++++.++.++..|....++ ..||... T Consensus 79 vr~lp~~-~~i~~~~~~~~l~i~~~~~~f~l~~~~~~~fP~ip 120 (122) T d1ok7a1 79 CRGLPEG-AEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLD 120 (122) T ss_dssp HHHSCTT-CEEEEEEETTEEEEEETTEEEEEECBCGGGSCCCC T ss_pred HHHCCCC-CCEEEEECCCEEEEEECCEEEEECCCCHHHCCCCC T ss_conf 9749999-81899965998999989659997267978888999 No 10 >d1ok7a2 d.131.1.1 (A:123-244) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Probab=99.14 E-value=3.8e-09 Score=71.75 Aligned_cols=116 Identities=14% Similarity=0.164 Sum_probs=96.4 Q ss_pred EEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEEEE-ECCCCEEEEEHHHHHHHHHC Q ss_conf 58985999999999875020378886101338999989979999967828999999777-52680799949987788740 Q gi|254780454|r 2 KITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS-VDVCGSITVSAHLLYDIVRK 80 (385) Q Consensus 2 k~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~~~-i~~~G~~~v~a~~l~~iik~ 80 (385) .|+|+.++|.++|..+.-+++...+.|+|.|++++..++++.+.|||+-.-.....+.+ ..+...++||++.+.++.|. T Consensus 5 ~~~i~~~~l~~~i~~t~~A~s~de~r~~L~Gv~~~~~~~~l~~vATDg~RLa~~~~~~~~~~~~~~~iip~k~l~el~~~ 84 (122) T d1ok7a2 5 EFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRM 84 (122) T ss_dssp EEEEEHHHHHHHHHHHGGGSCSSCSSGGGSEEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEEEEEEEHHHHHHHHHT T ss_pred EEEECHHHHHHHHHHEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH T ss_conf 99998999999984475897157773104768999808804899816848788886147775533321341678888776 Q ss_pred CCCC-CCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCC Q ss_conf 7777-7304777336750899986782024303662114321 Q gi|254780454|r 81 LQDG-AQISFFKENELGTEVNISHGDSNFYLQSFPESEFPST 121 (385) Q Consensus 81 L~~~-~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~~ 121 (385) ++++ ..+.+...+ +++.+++++..+.-..++. .||.. T Consensus 85 l~~~~~~v~i~~~~---~~i~f~~~~~~~~srlIeG-~fPdY 122 (122) T d1ok7a2 85 LDGGDNPLRVQIGS---NNIRAHVGDFIFTSKLVDG-RFPDY 122 (122) T ss_dssp CCCCSSEEEEEEES---SEEEEEETTEEEEEECCCS-CCCCG T ss_pred HCCCCCEEEEEECC---CEEEEEECCEEEEEEEECC-CCCCC T ss_conf 41676248897468---7089998999999988463-38698 No 11 >d1vpka3 d.131.1.1 (A:244-366) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]} Probab=98.17 E-value=4.8e-05 Score=46.83 Aligned_cols=106 Identities=14% Similarity=0.294 Sum_probs=76.3 Q ss_pred EEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEE-EEEEEEEEEEC-CCCEEEEEHHHHHHHHH Q ss_conf 58985999999999875020378886101338999989979999967828-99999977752-68079994998778874 Q gi|254780454|r 2 KITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEI-EITGAIPASVD-VCGSITVSAHLLYDIVR 79 (385) Q Consensus 2 k~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~-~i~~~i~~~i~-~~G~~~v~a~~l~~iik 79 (385) ++.+++.+|.++|+.++-+...++. ++.+..+++.+++++.+.+. .....++++.+ ++-++.++++.|.+.++ T Consensus 11 ~v~v~r~~l~~al~Rv~~~s~~~~~-----~V~l~~~~~~l~l~s~~~e~g~~~e~i~~~~~Ge~~~i~fN~~yL~d~L~ 85 (123) T d1vpka3 11 KVVVSRKELRESLKRVMVIASKGSE-----SVKFEIEENVMRLVSKSPDYGEVVDEVEVQKEGEDLVIAFNPKFIEDVLK 85 (123) T ss_dssp EEEEEHHHHHHHHHHHHHHHTTTTC-----CEEEEECSSEEEEEEEETTTEEEEEEEECEEEECCEEEEECHHHHHHHHH T ss_pred EEEEEHHHHHHHHHHHHHHHCCCCC-----CEEEEECCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEEECHHHHHHHHH T ss_conf 9999999999999999988437776-----35899638814888626652000411010025777699988999999995 Q ss_pred CCCCCCCEEEEEECCCCEEEEEEE-CCCEEEEECCC Q ss_conf 077777304777336750899986-78202430366 Q gi|254780454|r 80 KLQDGAQISFFKENELGTEVNISH-GDSNFYLQSFP 114 (385) Q Consensus 80 ~L~~~~~i~~~~~~~~~~~i~i~~-~~~~~~l~~~~ 114 (385) .+.+ ..+.+...+..++ +.|+. +...|..-.|| T Consensus 86 ~~~~-~~V~l~~~~~~~p-~~i~~~~~~~~~~liMP 119 (123) T d1vpka3 86 HIET-EEIEMNFVDSTSP-CQINPLDISGYLYIVMP 119 (123) T ss_dssp HCCS-SEEEEEESCTTSC-EEEEETTCCSEEEEECC T ss_pred HCCC-CEEEEEECCCCCC-EEEECCCCCCEEEEEEE T ss_conf 4789-8799998689998-89963899953899984 No 12 >d1ok7a3 d.131.1.1 (A:245-366) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Probab=98.03 E-value=0.00015 Score=43.79 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=71.8 Q ss_pred EEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEE-EEEEEEEEC-CCCEEEEEHHHHHHHHH Q ss_conf 5898599999999987502037888610133899998997999996782899-999977752-68079994998778874 Q gi|254780454|r 2 KITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEI-TGAIPASVD-VCGSITVSAHLLYDIVR 79 (385) Q Consensus 2 k~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i-~~~i~~~i~-~~G~~~v~a~~l~~iik 79 (385) ++.+++++|.++|+.++-+...++ .++.+..++++|++++.+.+.+- ...++++.+ ++-++.++++.|.|+++ T Consensus 11 ~i~v~r~el~~al~R~s~~~~~~~-----~~v~l~~~~~~l~lss~~~e~g~~~e~i~~~~~G~~~~I~fN~~yL~d~L~ 85 (122) T d1ok7a3 11 HLEAGCDLLKQAFARAAILSNEKF-----RGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLN 85 (122) T ss_dssp EEEEEHHHHHHHHHHHHTTSCTTS-----CEEEEEEETTEEEEEEECTTCCEEEEEEECBCCSCCEEEEEEHHHHHHHHH T ss_pred EEEEEHHHHHHHHHHHHHHHCCCC-----CEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECHHHHHHHHH T ss_conf 999989999999999998851788-----559999837703999757554304478731358844899999999999996 Q ss_pred CCCCCCCEEEEEECCCCEEEEEEE Q ss_conf 077777304777336750899986 Q gi|254780454|r 80 KLQDGAQISFFKENELGTEVNISH 103 (385) Q Consensus 80 ~L~~~~~i~~~~~~~~~~~i~i~~ 103 (385) .+++ ..+.+...+..++ +.|+. T Consensus 86 ~~~~-~~i~i~~~~~~~p-~~i~~ 107 (122) T d1ok7a3 86 ALKC-ENVRMMLTDSVSS-VQIED 107 (122) T ss_dssp HHCS-SEEEEEECCTTSC-EEEEE T ss_pred CCCC-CEEEEEECCCCCC-EEEEC T ss_conf 0799-8799998389997-89857 No 13 >d1rwza2 d.131.1.2 (A:123-244) Proliferating cell nuclear antigen (PCNA) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=97.99 E-value=0.00026 Score=42.35 Aligned_cols=111 Identities=16% Similarity=0.248 Sum_probs=85.1 Q ss_pred CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEE----EEECCCCEEEEECHHHHHH Q ss_conf 566179984899888898874101235553025651765999980787326899999----8962884399963889988 Q gi|254780454|r 256 SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMN----VYYNECPMDICFNYKYLLE 331 (385) Q Consensus 256 ~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~----~~~~G~~~~i~fN~~yl~d 331 (385) +++..+.+.-.+|.++++.+..+++ .|.+..+++.+.+++.+ |.|++.-.+. ..+..++.+-.|..+||.. T Consensus 4 e~~~~i~m~s~~f~~~~~dl~~~~d----~v~i~~~~~~i~f~~~g-d~g~~~~~~~~~~~~~~~~~~~~~~fsl~YL~~ 78 (122) T d1rwza2 4 ELPAKIVMDAGEFKKAIAAADKISD----QVIFRSDKEGFRIEAKG-DVDSIVFHMTETELIEFNGGEARSMFSVDYLKE 78 (122) T ss_dssp CCSEEEEEEHHHHHHHHHHHHTTCS----EEEEEEETTEEEEEEEC-SSCEEEEEECGGGSSEECCCCEEEEEEHHHHHH T ss_pred CCEEEEEEEHHHHHHHHHHHHHCCC----EEEEEECCCEEEEEEEC-CCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHH T ss_conf 8408999998999999999984299----79999839999999974-575799997687641112552068996899998 Q ss_pred HHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE Q ss_conf 987357533466338999658987589943776544455566763799832 Q gi|254780454|r 332 IIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385) Q Consensus 332 ~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385) +.|+.... +.|++++. ...|+.+.-.=. ++...-.|.|-| T Consensus 79 ~~K~~~ls----~~v~i~~~-~~~Pl~l~y~i~------~~~g~i~fylAP 118 (122) T d1rwza2 79 FCKVAGSG----DLLTIHLG-TNYPVRLVFELV------GGRAKVEYILAP 118 (122) T ss_dssp HGGGCCTT----CEEEEEEC-SSSCEEEEEEET------TTTEEEEEEECC T ss_pred HHHHCCCC----CEEEEEEC-CCCCEEEEEEEC------CCCEEEEEEECC T ss_conf 76041589----87999981-898899999976------896899999763 No 14 >d1plqa2 d.131.1.2 (A:127-258) Proliferating cell nuclear antigen (PCNA) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=97.97 E-value=0.00039 Score=41.31 Aligned_cols=101 Identities=24% Similarity=0.390 Sum_probs=82.3 Q ss_pred CCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEE-----------EE-ECCCC Q ss_conf 355-566179984899888898874101235553025651765999980787326899999-----------89-62884 Q gi|254780454|r 253 IPC-SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMN-----------VY-YNECP 319 (385) Q Consensus 253 ip~-~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~-----------~~-~~G~~ 319 (385) ||. +++..+++.-.+|.++++.+..+.+. |.+..+++++.+++.+ +.|++.-.+. .. -.+++ T Consensus 2 IP~~ey~~~i~m~S~~f~~~~kdl~~~gd~----i~i~~~~~~i~f~~~g-d~g~~~i~i~~~~~~~~~~~~~~~~~~~~ 76 (132) T d1plqa2 2 IEELQYDSTLSLPSSEFSKIVRDLSQLSDS----INIMITKETIKFVADG-DIGSGSVIIKPFVDMEHPETSIKLEMDQP 76 (132) T ss_dssp CCCSCCSEEEEEEHHHHHHHHHHHHTTCSE----EEEEEETTEEEEEEEC-SSCEEEEEECCBCCTTCGGGCBEEEESSC T ss_pred CCCCCCCEEEEEEHHHHHHHHHHHHHCCCE----EEEEECCCEEEEEEEC-CCCEEEEEEECCCCCCCCCCCEEEECCCC T ss_conf 898665579998999999999999864994----9999859968999972-55359999922577666542125511642 Q ss_pred EEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCC Q ss_conf 39996388998898735753346633899965898758994377 Q gi|254780454|r 320 MDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKD 363 (385) Q Consensus 320 ~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~ 363 (385) ++-.|..+||..+.++..- .+.|++++.. ..|+.+.-.- T Consensus 77 ~~~~ysl~yL~~~~K~~~l----s~~V~i~~~~-~~Pl~~~y~i 115 (132) T d1plqa2 77 VDLTFGAKYLLDIIKGSSL----SDRVGIRLSS-EAPALFQFDL 115 (132) T ss_dssp EEEEEEHHHHHHHGGGGGT----CSEEEEEECS-SSCEEEEEEE T ss_pred EEEEEEHHHHHHHHCCCCC----CCEEEEEEEC-CCCEEEEEEE T ss_conf 0439888999987672468----9989999948-9889999996 No 15 >d1iz5a2 d.131.1.2 (A:126-246) Proliferating cell nuclear antigen (PCNA) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=97.95 E-value=0.00026 Score=42.44 Aligned_cols=110 Identities=15% Similarity=0.250 Sum_probs=85.4 Q ss_pred CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEE------EE-CCCCEEEEECHHH Q ss_conf 5661799848998888988741012355530256517659999807873268999998------96-2884399963889 Q gi|254780454|r 256 SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNV------YY-NECPMDICFNYKY 328 (385) Q Consensus 256 ~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~------~~-~G~~~~i~fN~~y 328 (385) +++..+.++-.+|.++++.+..+++. |.++.+++.+.+++.+ |.|++...+.. .+ .+++++..|..+| T Consensus 4 ~~~~~i~~~s~~f~~ii~~l~~~~d~----i~i~~~~~~i~f~~~g-d~g~~~v~~~~~~~~~~~~~~~~~~~~~ysl~y 78 (121) T d1iz5a2 4 PFTAKVVVLGEVLKAAVKAASLVSDS----IKFIARENEFIMKAEG-ETQEVEIKLTLEDEGLLDIEVQEETKSAYGVSY 78 (121) T ss_dssp CCCEEEEEEHHHHHHHHHHHTTTCSE----EEEEEETTEEEEEEEC-SSCEEEEEEETTTTSSSEEEESSCEEEEEEHHH T ss_pred CCEEEEEEEHHHHHHHHHHHHHCCCE----EEEEECCCEEEEEEEC-CCCEEEEEECCCCCCCEEEECCCCEEEEEEHHH T ss_conf 84089999999999999998731896----9999829999999984-476799999479874279972885689998899 Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE Q ss_conf 988987357533466338999658987589943776544455566763799832 Q gi|254780454|r 329 LLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385) Q Consensus 329 l~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385) |..+.++..- .+.|++++. ...|+.+.-.-.+ .....|.|-| T Consensus 79 L~~~~K~~~l----s~~V~i~~~-~~~Pl~l~y~~~~-------~g~i~f~LAP 120 (121) T d1iz5a2 79 LSDMVKGLGK----ADEVTIKFG-NEMPMQMEYYIRD-------EGRLTFLLAP 120 (121) T ss_dssp HHHHHTTSCT----TCEEEEEEC-TTCCEEEEEEETT-------TEEEEEEECC T ss_pred HHHHHHHCCC----CCEEEEEEC-CCCCEEEEEEECC-------CCEEEEEECC T ss_conf 8987612258----998999986-9988999999689-------9489999826 No 16 >d1u7ba2 d.131.1.2 (A:127-255) Proliferating cell nuclear antigen (PCNA) {Human (Homo sapiens) [TaxId: 9606]} Probab=97.93 E-value=0.00025 Score=42.47 Aligned_cols=113 Identities=17% Similarity=0.253 Sum_probs=86.0 Q ss_pred CCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEE-----------E-ECCCC Q ss_conf 355-5661799848998888988741012355530256517659999807873268999998-----------9-62884 Q gi|254780454|r 253 IPC-SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNV-----------Y-YNECP 319 (385) Q Consensus 253 ip~-~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~-----------~-~~G~~ 319 (385) ||+ +++..+.+.-.+|.+.++-+..+.+ .+.+..+++.+.+++.+ |.|+++..+.- . -.+++ T Consensus 2 IP~~ey~~~i~~~s~~f~~~~kdl~~~gd----~v~i~~~~~~i~~~~~g-d~g~~~~~i~~~~~~~~~~~~~~i~~~~~ 76 (129) T d1u7ba2 2 IPEQEYSCVVKMPSGEFARICRDLSHIGD----AVVISCAKDGVKFSASG-ELGNGNIKLSQTSNVDKEEEAVTIEMNEP 76 (129) T ss_dssp CCCCCCSEEEEEEHHHHHHHHHHHHTTCS----EEEEEEETTEEEEEEEE-TTEEEEEEECCCC----CCSCCEEEESSC T ss_pred CCCCCCCEEEEEEHHHHHHHHHHHHHHCC----HHEEEECCCEEEEEEEC-CCCEEEEEEECCCCCCCCCCEEEEECCCC T ss_conf 79977768999998999999999987170----54178658727999862-66427788703566667542057613754 Q ss_pred EEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE Q ss_conf 399963889988987357533466338999658987589943776544455566763799832 Q gi|254780454|r 320 MDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385) Q Consensus 320 ~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385) ++..|..+||..+.+...- .+.|.+++ +...|+.++-.-.+ .-...+.|-| T Consensus 77 ~~~~fsl~YL~~~~K~~~l----s~~v~i~~-~~~~Pl~i~y~~~~-------~g~l~fyLAP 127 (129) T d1u7ba2 77 VQLTFALRYLNFFTKATPL----SSTVTLSM-SADVPLVVEYKIAD-------MGHLKYYLAP 127 (129) T ss_dssp EEEEEEHHHHHHHGGGGGG----CSEEEEEE-CTTSCEEEEEEETT-------TEEEEEEECC T ss_pred CEEEEEHHHHHHHHCHHCC----CCEEEEEE-CCCCCEEEEEEECC-------CCEEEEEECC T ss_conf 2169878999987465347----88399998-59988999998189-------9589999843 No 17 >d1ud9a2 d.131.1.2 (A:127-245) Proliferating cell nuclear antigen (PCNA) {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Probab=97.59 E-value=0.0019 Score=37.09 Aligned_cols=109 Identities=15% Similarity=0.215 Sum_probs=81.7 Q ss_pred CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEE------EEE-CCCCEEEEECHHH Q ss_conf 566179984899888898874101235553025651765999980787326899999------896-2884399963889 Q gi|254780454|r 256 SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMN------VYY-NECPMDICFNYKY 328 (385) Q Consensus 256 ~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~------~~~-~G~~~~i~fN~~y 328 (385) +++..+++.-.+|.+.++.+..+++ .|.+..+++.+.+++.+. |.+...+. ..+ .+++.+..|..+| T Consensus 1 Ey~~~i~m~s~~f~~ii~dl~~~~d----~v~i~~~~~~i~f~~~gd--~~~~~~~~~~~~~~~~~~~~~~~~~~ysl~y 74 (119) T d1ud9a2 1 EFDIKATINASGLKNAIGEIAEVAD----TLLISGNEEKVVVKGEGE--NKVEVEFSKDTGSLADIEFNKESSSAYDVEY 74 (119) T ss_dssp CCSEEEEEEHHHHHHHHHHHHHHCS----EEEEEECSSEEEEEESSS--SCCCEEEEGGGTCEEEEEESSCEEEEEEHHH T ss_pred CCCEEEEEEHHHHHHHHHHHHHCCC----EEEEEECCCEEEEEEECC--CCEEEEEECCCCCEEEEECCCCEEEEEEHHH T ss_conf 9887999999999999999984099----899999189999999738--8379999448985179862876689998899 Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE Q ss_conf 988987357533466338999658987589943776544455566763799832 Q gi|254780454|r 329 LLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385) Q Consensus 329 l~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385) |..+.++..- .+.|.+++ +...|+.++-.-. +.....|.|.| T Consensus 75 L~~~~K~~~l----s~~v~i~~-~~d~Pl~l~y~l~-------~~g~i~f~lAP 116 (119) T d1ud9a2 75 LNDIISLTKL----SDYVKVAF-ADQKPMQLEFNME-------GGGKVTYLLAP 116 (119) T ss_dssp HHHTGGGGGG----CSEEEEEE-CTTSCEEEEEECG-------GGCEEEEEECC T ss_pred HHHHHHHCCC----CCEEEEEE-CCCCCEEEEEEEC-------CCEEEEEEEEE T ss_conf 8998755068----98799998-7996899999958-------98099999920 No 18 >d1rwza1 d.131.1.2 (A:1-122) Proliferating cell nuclear antigen (PCNA) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=97.47 E-value=0.0028 Score=36.16 Aligned_cols=110 Identities=12% Similarity=0.226 Sum_probs=84.6 Q ss_pred EEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCE--EEEEEEEEE------EECCCCEEEEEHHH Q ss_conf 5898599999999987502037888610133899998997999996782--899999977------75268079994998 Q gi|254780454|r 2 KITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPE--IEITGAIPA------SVDVCGSITVSAHL 73 (385) Q Consensus 2 k~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~--~~i~~~i~~------~i~~~G~~~v~a~~ 73 (385) +++++.+.|...++.++.++ ..+-++...+++.++|.|.. .-+...+++ +++++-.+.|+-.. T Consensus 3 ~~~~~a~~~k~i~~~l~~l~---------~e~~~~~~~~Gi~iq~mD~s~v~Lv~l~L~~~~F~~Y~~~~~~~iGv~~~~ 73 (122) T d1rwza1 3 DVIMTGELLKTVTRAIVALV---------SEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDR 73 (122) T ss_dssp EEEEEHHHHHHHHHHHHTTC---------SEEEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEHHH T ss_pred EEEECHHHHHHHHHHHHHHH---------CEEEEEECCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCEEEEEEHHH T ss_conf 69962899999999999874---------538999906837999967872899999977246718960898799999999 Q ss_pred HHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCC Q ss_conf 7788740777773047773367508999867820243036621143212 Q gi|254780454|r 74 LYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTK 122 (385) Q Consensus 74 l~~iik~L~~~~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~~~ 122 (385) |..++|.+..+..+.+..++ ++.+.+..++.+|+++.+|++.-|.-| T Consensus 74 l~kilk~~~~~d~l~l~~~~--~~~l~i~~~~~~f~l~LlD~~s~~~eP 120 (122) T d1rwza1 74 IFDISKSISTKDLVELIVED--ESTLKVKFGSVEYKVALIDPSAIRKEP 120 (122) T ss_dssp HHHHHTTSCTTSEEEEEESS--SSEEEEEETTEEEEEECBCGGGSCCCC T ss_pred HHHHHHHCCCCCEEEEEECC--CCEEEEEEECCEEEEECCCCCCCCCCC T ss_conf 99999618899779999769--998999990508999670654456998 No 19 >d1iz5a1 d.131.1.2 (A:2-120) Proliferating cell nuclear antigen (PCNA) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=95.92 E-value=0.042 Score=28.97 Aligned_cols=86 Identities=16% Similarity=0.181 Sum_probs=36.9 Q ss_pred CEEEEEEECCEEEEEEECCE--EEEEEEEEE------EECCCCEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEE Q ss_conf 33899998997999996782--899999977------7526807999499877887407777730477733675089998 Q gi|254780454|r 31 CHVLLQANDGLLEIKASGPE--IEITGAIPA------SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNIS 102 (385) Q Consensus 31 ~~ilie~~~~~l~l~atd~~--~~i~~~i~~------~i~~~G~~~v~a~~l~~iik~L~~~~~i~~~~~~~~~~~i~i~ 102 (385) ..+-+...++++.+.+.|.. .-+...+++ +++++-.+.|+-..|..++|.+..+..+.+..+++....+.+. T Consensus 24 ~e~~l~~~~~Gi~iq~mD~shv~lv~l~L~~~~F~~Y~~~~~~~iGi~~~~L~kilk~~~~~d~l~l~~~~~~~l~i~~~ 103 (119) T d1iz5a1 24 DEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNLDHLKKILKRGKAKDTLILKKGEENFLEITIQ 103 (119) T ss_dssp SEEEEEECSSEEEEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEHHHHHHHHTTCCTTCEEEEEECSSSEEEEEEE T ss_pred CEEEEEEECCEEEEEEECCCCEEEEEEEECHHHCEEECCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEE T ss_conf 62899990683899996789589999999878885771377779879999999999617799889999768988999996 Q ss_pred EC-CCEEEEECCCCC Q ss_conf 67-820243036621 Q gi|254780454|r 103 HG-DSNFYLQSFPES 116 (385) Q Consensus 103 ~~-~~~~~l~~~~~~ 116 (385) .. ..+|+++.+|.+ T Consensus 104 ~~~~~~f~l~Lidid 118 (119) T d1iz5a1 104 GTATRTFRVPLIDVE 118 (119) T ss_dssp SSSEEEEEEECBCCC T ss_pred CCCEEEEEEEEECCC T ss_conf 891579997605578 No 20 >d1ud9a1 d.131.1.2 (A:1-119) Proliferating cell nuclear antigen (PCNA) {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Probab=94.70 E-value=0.11 Score=26.54 Aligned_cols=81 Identities=10% Similarity=0.230 Sum_probs=35.5 Q ss_pred EHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEE-EEEEEEE----EEC-CCCEEEEECHHHHHHHHHHCC Q ss_conf 4899888898874101235553025651765999980787326-8999998----962-884399963889988987357 Q gi|254780454|r 264 NCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGK-AIESMNV----YYN-ECPMDICFNYKYLLEIIDNIS 337 (385) Q Consensus 264 ~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~-~~e~i~~----~~~-G~~~~i~fN~~yl~d~L~~~~ 337 (385) +.+.|...++-+.-+.++ +.|.++++++.+.+-++..-. ..-.++. .|+ .++..+|+|...|..+|+... T Consensus 7 da~~fk~i~~~lk~l~~e----~~~~~~~~Gi~iq~mD~s~v~lv~l~L~~~~F~~Y~~~~~~~igv~~~~l~kilk~~~ 82 (119) T d1ud9a1 7 DVRDLKAIIQALLKLVDE----ALFDIKPEGIQLVAIDKAHISLIKIELPKEMFKEYDVPEEFKFGFNTQYMSKLLKAAK 82 (119) T ss_dssp CHHHHHHHHHHHHHHCSE----EEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEEECSSCEEEEEEHHHHHHHHTTCC T ss_pred CHHHHHHHHHHHHHHHCE----EEEEECCCEEEEEEECCCCEEEEEEEECHHHCCCCCCCCCEEEEEEHHHHHHHHHHCC T ss_conf 789999999999987544----9999916827999967887899999967787864056877899999999999996188 Q ss_pred CCCCCCCEEEEEECC Q ss_conf 533466338999658 Q gi|254780454|r 338 SDEVVDDEVVFRLDS 352 (385) Q Consensus 338 ~~~~~~e~i~l~~~~ 352 (385) .+ +.++|..++ T Consensus 83 ~~----d~l~l~~~~ 93 (119) T d1ud9a1 83 RK----EEIIIDADS 93 (119) T ss_dssp SC----CCEEEEEEE T ss_pred CC----CEEEEEECC T ss_conf 99----889999679 No 21 >d1plqa1 d.131.1.2 (A:1-126) Proliferating cell nuclear antigen (PCNA) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=94.69 E-value=0.11 Score=26.53 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=40.0 Q ss_pred EHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCE--EEEEEEEEEE------ECCCCEEEEEHHHHHHH Q ss_conf 599999999987502037888610133899998997999996782--8999999777------52680799949987788 Q gi|254780454|r 6 ERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPE--IEITGAIPAS------VDVCGSITVSAHLLYDI 77 (385) Q Consensus 6 ~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~--~~i~~~i~~~------i~~~G~~~v~a~~l~~i 77 (385) +-..|...++.++.++ ..+-++..++++.+.+.|.. .-+...++++ ++++-.+.|+-..|..| T Consensus 8 ~a~~fk~i~~~lk~l~---------~~~~~~~~~~Gi~iq~mD~shv~lv~l~L~~~~F~~Y~~~~~~~iGi~~~~l~kI 78 (126) T d1plqa1 8 EASLFKRIIDGFKDCV---------QLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEYRCDHPVTLGMDLTSLSKI 78 (126) T ss_dssp SHHHHHHHHHHHTTTC---------SEEEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEECCSSCEEEEEEHHHHHHH T ss_pred CHHHHHHHHHHHHHHH---------CEEEEEECCCEEEEEEECCCCEEEEEEEECHHHCCEEEECCCEEEEEEHHHHHHH T ss_conf 6689999999998874---------5399999778699999688858999999887879604325678999998998999 Q ss_pred HHCCCCCCCEEEEEEC Q ss_conf 7407777730477733 Q gi|254780454|r 78 VRKLQDGAQISFFKEN 93 (385) Q Consensus 78 ik~L~~~~~i~~~~~~ 93 (385) +|....+..+.+..++ T Consensus 79 lk~~~~~d~l~l~~~~ 94 (126) T d1plqa1 79 LRCGNNTDTLTLIADN 94 (126) T ss_dssp TTCSTTTSEEEEEECS T ss_pred HHHCCCCCEEEEEEEC T ss_conf 8536899889999908 No 22 >d1u7ba1 d.131.1.2 (A:1-126) Proliferating cell nuclear antigen (PCNA) {Human (Homo sapiens) [TaxId: 9606]} Probab=92.30 E-value=0.28 Score=24.04 Aligned_cols=79 Identities=10% Similarity=0.087 Sum_probs=39.6 Q ss_pred EHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCE--EEEEEEEEE------EECCCCEEEEEHHHHHHH Q ss_conf 599999999987502037888610133899998997999996782--899999977------752680799949987788 Q gi|254780454|r 6 ERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPE--IEITGAIPA------SVDVCGSITVSAHLLYDI 77 (385) Q Consensus 6 ~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~--~~i~~~i~~------~i~~~G~~~v~a~~l~~i 77 (385) +...|...++.++.++ ..+-+...++++.+.|.|.. .-+...++. +++++-.+.|+...|..+ T Consensus 8 ~a~~fk~i~~~lk~l~---------~e~~~~~~~~Gi~iq~mD~shv~Lv~l~L~~~~F~~Y~~~~~~~iGv~~~~l~kI 78 (126) T d1u7ba1 8 QGSILKKVLEALKDLI---------NEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKI 78 (126) T ss_dssp CTHHHHHHHHHHHTTC---------SEEEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEHHHHHHH T ss_pred CHHHHHHHHHHHHHHH---------CEEEEEECCCEEEEEEECCCCEEEEEEEECHHHCCEEEECCCEEEEEEHHHHHHH T ss_conf 5799999999998875---------4289999079689999788858999999997988336875777998989999999 Q ss_pred HHCCCCCCCEEEEEEC Q ss_conf 7407777730477733 Q gi|254780454|r 78 VRKLQDGAQISFFKEN 93 (385) Q Consensus 78 ik~L~~~~~i~~~~~~ 93 (385) +|.+.++..+.+..++ T Consensus 79 lk~~~~~d~l~l~~~~ 94 (126) T d1u7ba1 79 LKCAGNEDIITLRAED 94 (126) T ss_dssp HTTSCTTCEEEEEECT T ss_pred HHHCCCCCEEEEEEEC T ss_conf 9516899789999947 No 23 >d2fa8a1 c.47.1.23 (A:4-89) Hypothetical protein Atu0228 {Agrobacterium tumefaciens [TaxId: 358]} Probab=52.27 E-value=2 Score=18.76 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=33.3 Q ss_pred HHHHHHHCCCCCCCCCCCCC-CCCEEEECCEEEEEEEECCCCCCCCCCCC Q ss_conf 12222102776464331334-55301002506999851266553221013 Q gi|254780454|r 205 VGEILRILSSKDSSVKVSLS-ESRIHLNIESLSMSVRLIDGEFPNYQNVI 253 (385) Q Consensus 205 l~el~k~l~~~~~~v~i~~~-~~~i~~~~~~~~~~srLi~g~yPdy~~vi 253 (385) .+||+..+.+.-.+|++.-+ +..+.+..+...+++|+-+|.|||.+.+. T Consensus 23 aqeLl~tF~~~i~evsL~P~~~G~FeV~v~g~li~srk~~ggFPd~kelk 72 (86) T d2fa8a1 23 AQEILQTFASDIGEVSLIPSTGGLFEITVDGTIIWERKRDGGFPGPKELK 72 (86) T ss_dssp HHHHHHHHGGGCSEEEEEEECTTCEEEEETTEEEEEHHHHTSCCCHHHHH T ss_pred HHHHHHHCCCCCCEEEEEECCCEEEEEEECCEEEEEECCCCCCCCHHHHH T ss_conf 99999867766761999988991799998999999963579899889999 No 24 >d2qdya1 d.149.1.1 (A:10-206) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]} Probab=22.94 E-value=16 Score=13.32 Aligned_cols=10 Identities=40% Similarity=0.654 Sum_probs=4.7 Q ss_pred CCCCCHHHHH Q ss_conf 0010001222 Q gi|254780454|r 199 IVPRKAVGEI 208 (385) Q Consensus 199 iiP~k~l~el 208 (385) .=|++.|.|+ T Consensus 130 ~ePR~VL~Ef 139 (197) T d2qdya1 130 REPRKVLSEM 139 (197) T ss_dssp TCHHHHHHHH T ss_pred HHHHHHHHHC T ss_conf 6679999982 Done!