BLAST/PSIBLAST alignment of GI: 254780454 and GI: 116250102 at iteration 1
>gi|116250102|ref|YP_765940.1| DNA polymerase III subunit beta [Rhizobium leguminosarum bv. viciae 3841] Length = 372
>gi|115254750|emb|CAK05824.1| putative DNA polymerase III, beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 372
 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 187/387 (48%), Positives = 260/387 (67%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQKLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++     ++ G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQPGATTVPAHLLYDIVRKLSDGSEVLLATSSD-GGSMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH  E +  LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGQLKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + +  V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEVMVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT+  QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTSFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372