BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780454|ref|YP_003064867.1| DNA polymerase III subunit
beta [Candidatus Liberibacter asiaticus str. psy62]
         (385 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|85711020|ref|ZP_01042081.1| DNA polymerase sliding clamp subunit [Idiomarina baltica OS145]
 gi|85695424|gb|EAQ33361.1| DNA polymerase sliding clamp subunit [Idiomarina baltica OS145]
          Length = 367

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 135/386 (34%), Positives = 215/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TV R   L+ L      +ER++T+P+  ++LL+     L +  +  E+E+  ++   
Sbjct: 1   MKFTVSRDAFLKPLQIVSGAVERRHTLPILSNLLLKVEGDTLRLTGTDLEVELISSVKVE 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G +TV A  L DIVR L D + I    ++E    V +  G S F L S    +FP
Sbjct: 61  SSGGDGMVTVPAKKLLDIVRSLPDESPIELVGDDEG---VRVRSGRSKFKLSSLSADDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++     +F  +   LK L+E+THF+MA +++RYYLNG+ F  +     L +VATDGH
Sbjct: 118 NIEDWSSEVNFITSQDTLKRLMEKTHFSMANQDVRYYLNGMLFETDANM--LRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I         +IVPRK V E+LR+L+  DS V V++  + I +    +  + 
Sbjct: 176 RLAMSNCHIEQPGLSQRQVIVPRKGVVELLRLLNEDDSEVAVAIGNNHIRVETADIVFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK++  +   LRQA  R SI+S+ + + V+L++++ +LC+T 
Sbjct: 236 KLVDGRFPDYRRVVPQGGDKQIFADRDLLRQAFGRASILSNEKFRGVRLNITAGELCITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+  +A E + V Y    ++I FN  YLL++++NI +     +EV F L  +NSS  I
Sbjct: 296 TNPEQEQAEEVIEVNYEGEAIEIGFNVSYLLDVLNNIEA-----EEVCFVLSDANSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
             KD DS           YV+MPMR+
Sbjct: 351 EPKDDDSCC---------YVVMPMRL 367


>gi|254780454|ref|YP_003064867.1| DNA polymerase III subunit beta [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040131|gb|ACT56927.1| DNA polymerase III subunit beta [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 385

 Score =  301 bits (771), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 385/385 (100%), Positives = 385/385 (100%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS
Sbjct: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS
Sbjct: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
           TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR
Sbjct: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR
Sbjct: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD
Sbjct: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR
Sbjct: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
           GKDKDSKNNKDNKVNAFYVLMPMRI
Sbjct: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385


>gi|56459114|ref|YP_154395.1| DNA polymerase sliding clamp subunit [Idiomarina loihiensis L2TR]
 gi|56178124|gb|AAV80846.1| DNA polymerase sliding clamp subunit [Idiomarina loihiensis L2TR]
          Length = 367

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 135/386 (34%), Positives = 217/386 (56%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R   L+ L      +ER++T+P+  ++LLQ ++G L++  +  E+E+  A+P  
Sbjct: 1   MKFSINRDAFLKPLQVVSGAVERRHTLPILSNLLLQVDNGQLKLTGTDLEVELVSAVPLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             D+  ++TV A  L DIVR L +G+ I F  + +      +  G S F L +    +FP
Sbjct: 61  SADMDAAVTVPAKKLLDIVRSLPEGSTIEFTSQEDS---ATVKSGRSKFKLSTLSSDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +         +VLK+L+ +THF+MA +++RYYLNG+ F  +     L +VATDGH
Sbjct: 118 NIDDWKSDIHLVTEQAVLKDLMLKTHFSMANQDVRYYLNGMLFETDNGM--LRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I         +IVPRK V E+LR+L   D  V VS+  + I +    L  + 
Sbjct: 176 RLAMSTCAIDQPGLAQRQVIVPRKGVVELLRLLGDDDQEVSVSIGNNHIRVETPELVFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   LRQ+  R SI+S+ + + V+L+LSS +LC+T 
Sbjct: 236 KLVDGRFPDYRRVLPSGGDKVIVAHRDALRQSFGRASILSNEKFRGVRLNLSSGELCITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+  +A E + V Y    ++I FN  YLL++++NI      D++V F L  SNSS  I
Sbjct: 296 TNPEQEQAEEVIEVDYQGDDLEIGFNVSYLLDVLNNID-----DEQVSFTLSDSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
             +  +S           YV+MPMR+
Sbjct: 351 EPQHDESCC---------YVIMPMRL 367


>gi|254515868|ref|ZP_05127928.1| DNA polymerase III, beta subunit [gamma proteobacterium NOR5-3]
 gi|219675590|gb|EED31956.1| DNA polymerase III, beta subunit [gamma proteobacterium NOR5-3]
          Length = 367

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 209/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V R  +L+ L     ++ER+ T+PV  +VLL  +   L I  +  E+E+ G +   
Sbjct: 1   MKFRVSRDALLKPLNLVAGVVERRQTLPVLSNVLLNLDGDRLSITGTDLEVELVGRVNLE 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G IT+ A  L DI + L DGA +          +  +  G S F L + P  EFP
Sbjct: 61  SEGDAGEITLPARKLADICKSLPDGADLEISV---SDGKATVRSGRSRFTLATLPAREFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++    + F L    L+ L+ERT FAMA +++RYYLNG+++ +     +L AVATDGH
Sbjct: 118 NIEDSIGTHQFTLKQGQLRRLIERTGFAMAQQDVRYYLNGMYWELRAG--RLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+       +  +   +I+PRK V E+ R++ + D  V + L  + +       + + 
Sbjct: 176 RLAICTFPGTLKDLEDTQVILPRKGVLELSRLMQNDDEDVTIILGSNHLRATTTEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P + DK ++ + T LRQA  R +I+S+ + + V+L LS+  L +  
Sbjct: 236 KLVDGKFPDYERVLPRAADKIVQSSRTELRQAFTRTAILSNEKYRGVRLKLSNGSLEIVA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E++ V Y+   ++I FN  YLL+++  +S      DE+ F L   NSS  +
Sbjct: 296 NNPEQEQAEENLPVNYSGDSLEIGFNVGYLLDVLGVLSG-----DEIRFSLSDPNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D           ++ YV+MPMR+
Sbjct: 351 EETD---------GGDSLYVVMPMRL 367


>gi|154250460|ref|YP_001411284.1| DNA polymerase III subunit beta [Parvibaculum lavamentivorans DS-1]
 gi|154154410|gb|ABS61627.1| DNA polymerase III, beta subunit [Parvibaculum lavamentivorans
           DS-1]
          Length = 372

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 156/387 (40%), Positives = 229/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKIT+ER  +L+ L H   ++ER+NTIP+  +VL++A DG L + A+  +IE+  AI A 
Sbjct: 1   MKITIERGALLKSLNHVQSVVERRNTIPILSNVLIKAEDGQLSLTATDLDIEVVEAIDAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ T SAH LYDIVRKL +GAQ+      + G  + ++ G S F LQS P+ +FP 
Sbjct: 61  VAQPGATTASAHTLYDIVRKLPEGAQVELSTGADEG-RLQLTAGRSRFALQSLPQEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLK--LCAVATDG 178
                  + FEL +  ++ L+++T FA++ EE RYYLNGI+FH  +   +  L AVATDG
Sbjct: 120 MAAGSLPHRFELPAEAMRRLIDKTRFAISMEETRYYLNGIYFHAVDGPKQKSLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+    A MP +IVPRK V E+ ++L     ++ V +SE++I      + ++
Sbjct: 180 HRLAQVDHDLPEGAAGMPGVIVPRKTVLELQKLLEGNSGALSVGVSETKIRFEFGGIVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L+V+     +AVDRVS +S+ + +AVKL++   KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPVGNDKMLQVDGKRFAEAVDRVSTISTEKSRAVKLNIEEGKLTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E ++V Y+   ++I FN +YLL+I   +        E  F    S S   
Sbjct: 300 VTNPDSGSATEELSVSYSSPAIEIGFNARYLLDITGQLDGA-----EASFAFADSGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R  +            A YVLMPMR+
Sbjct: 355 VRDSEDSM---------AVYVLMPMRV 372


>gi|88705399|ref|ZP_01103110.1| DNA polymerase III, beta chain [Congregibacter litoralis KT71]
 gi|88700489|gb|EAQ97597.1| DNA polymerase III, beta chain [Congregibacter litoralis KT71]
          Length = 367

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 207/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V R  +L+ L     ++ER+ T+PV  +VLL  +   L I  +  E+E+ G +   
Sbjct: 1   MKFRVSRDALLKPLNLVAGVVERRQTLPVLSNVLLNLDGDRLSITGTDLEVELVGRVNLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L DGA +          +  +  G S F L + P  EFP
Sbjct: 61  TAGEAGEITVPARKLADICKSLPDGADLEIAV---ADGKATVRSGRSRFTLATLPAREFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++    + F L    L+ L+ERT FAMA +++RYYLNG+++ +     +L AVATDGH
Sbjct: 118 NIEDSIGTHQFTLKQGQLRRLIERTGFAMAQQDVRYYLNGMYWELRAG--RLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+       +  +   +I+PRK V E+ R++ S D  V + L  + +       + + 
Sbjct: 176 RLAICTFPGTLKDLEDTQVILPRKGVLELSRLMQSDDEDVTIILGSNHLRATTAEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P + DK ++ + T LRQA  R +I+S+ + + V+L LS   L +  
Sbjct: 236 KLVDGKFPDYERVLPRAADKIVQSSRTELRQAFTRTAILSNEKYRGVRLKLSEGSLEIVA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A ES+ V Y+   ++I FN  YLL+++  +S      +++ F L   NSS  +
Sbjct: 296 NNPEQEQAEESLPVDYSGDALEIGFNVGYLLDVLGVLSG-----EKIRFSLSDPNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D           ++ YV+MPMR+
Sbjct: 351 EETD---------GGDSLYVVMPMRL 367


>gi|119475237|ref|ZP_01615590.1| DNA polymerase III subunit beta [marine gamma proteobacterium
           HTCC2143]
 gi|119451440|gb|EAW32673.1| DNA polymerase III subunit beta [marine gamma proteobacterium
           HTCC2143]
          Length = 368

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 210/387 (54%), Gaps = 21/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  + R  +L+ L     ++ER+ T+P+  +VLL+     L I  +  E+E+ G +   
Sbjct: 1   MKFVISREALLKPLNLVAGVVERRQTLPILSNVLLELEGNQLSITGTDLEVELVGRVVLD 60

Query: 61  V--DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
              +  G ITV A  L DI + L DG++I F ++++    V I  G S F L +   S+F
Sbjct: 61  QAPETGGEITVPARKLADICKSLPDGSEIEFTQDDQ---RVIIRSGRSRFTLSTLAASDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ +E      F +    LK L++RT FAMA +++RYYLNG+ + +     +L  VATDG
Sbjct: 118 PNVEESPGSQDFTVKQGDLKRLIDRTSFAMAQQDVRYYLNGMLWEVQSG--QLRVVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+  +    +  +   +I+PRK V E+ R++  +   V++ +  + I    +  + +
Sbjct: 176 HRLALCTLATSIETTENLQVILPRKGVVELARLMMKESDDVRLVIGSNHIRATTDEYTFT 235

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +L+DG+FP+Y  V+P ++ K +  +   LRQA  R +I+S+ + + V+L LS+D L + 
Sbjct: 236 SKLVDGKFPDYDRVLPKASTKTIFGSRDELRQAFSRTAILSNEKYRGVRLLLSNDTLQIV 295

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    ++I FN  YLL+++  +       + +   L  +NSS  
Sbjct: 296 ANNPEQEEAEEIVSVDYQGESLEIGFNVSYLLDVLGVLKG-----ETIKLSLADANSSAL 350

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +   ++          ++ YV+MPMR+
Sbjct: 351 LEESEEG---------DSMYVVMPMRL 368


>gi|116250102|ref|YP_765940.1| DNA polymerase III subunit beta [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254750|emb|CAK05824.1| putative DNA polymerase III, beta chain [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 372

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 259/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQKLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++     ++ G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQPGATTVPAHLLYDIVRKLSDGSEVLLATSSDGG-SMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   +   LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGQLKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + +  V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEVMVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT+  QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTSFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|209551896|ref|YP_002283813.1| DNA polymerase III subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537652|gb|ACI57587.1| DNA polymerase III, beta subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 372

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 261/387 (67%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQNLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++     ++ G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQSGATTVPAHLLYDIVRKLPDGSEVLLATSSDGG-SMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   ++ +LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESKGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + + +V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEVTVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT   QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTTFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|241207273|ref|YP_002978369.1| DNA polymerase III subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861163|gb|ACS58830.1| DNA polymerase III, beta subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 372

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 258/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQKLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      + G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQPGATTVPAHLLYDIVRKLSDGSEVLLATSPDGGA-MTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   +   LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKAADLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGQLKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + +  V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEVMVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT+  QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTSFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|114704370|ref|ZP_01437278.1| DNA polymerase III subunit beta [Fulvimarina pelagi HTCC2506]
 gi|114539155|gb|EAU42275.1| DNA polymerase III subunit beta [Fulvimarina pelagi HTCC2506]
          Length = 374

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 174/389 (44%), Positives = 240/389 (61%), Gaps = 19/389 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I +ERS++L+ L H  R++ER+NTIP+  +VLL+A    L +KA+  +IEIT  + A 
Sbjct: 1   MRIIIERSNLLKSLAHVHRVVERRNTIPILSNVLLRAKAETLGLKATDLDIEITEEVAAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
            +  G+ TV AHLLYDIVRKL DGA++     +E GT++ +S G SNF LQ  PE++FP 
Sbjct: 61  GEQEGATTVPAHLLYDIVRKLPDGAEVKLVLNSE-GTQMTVSAGRSNFRLQCLPETDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  + F + +  L  L+ERT FA++TEE RYYLNGI+ H    +  L L AVATDG
Sbjct: 120 ITAGELSHGFTMEAGALARLIERTQFAISTEETRYYLNGIYLHTIDADGTLMLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRIL--SSKDSSVKVSLSESRIHLNIESLS 236
           HRLA AE+   +    MP IIVPRK VGEI ++L     D  + V LSES+I   I  + 
Sbjct: 180 HRLARAEMTAPSGSEGMPGIIVPRKTVGEIQKLLADCEDDDEIAVDLSESKIRFKIGRVV 239

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           M+ +LIDG FP+YQ VIP +NDKEL ++  +   AVDRVS +SS R +AVKL+L+  +L 
Sbjct: 240 MTSKLIDGTFPDYQRVIPQNNDKELTLDRASFSSAVDRVSTISSERGRAVKLTLADSQLT 299

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           +TV++PD G A E + V Y    ++I FN +YLL++   +S      +E +F L    S 
Sbjct: 300 LTVNSPDAGTATEELAVGYESEDLEIGFNARYLLDVTSQLSG-----EEAMFVLADPGSP 354

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             I+     S           YVLMPMR+
Sbjct: 355 TLIKDGGDTST---------LYVLMPMRV 374


>gi|254502919|ref|ZP_05115070.1| DNA polymerase III, beta subunit [Labrenzia alexandrii DFL-11]
 gi|222438990|gb|EEE45669.1| DNA polymerase III, beta subunit [Labrenzia alexandrii DFL-11]
          Length = 375

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 164/387 (42%), Positives = 248/387 (64%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ER+D+L+ L H  R++ER+NTIP+  +VLL+A+ G L +KA+  ++EI   +PA 
Sbjct: 4   MKATLERTDLLKSLTHVHRVVERRNTIPILSNVLLRADGGALNLKATDLDLEIVETVPAM 63

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +++ G+ TV AH+ +DIVRKL +G+Q+      +    + I  G S F LQ  PE++FP 
Sbjct: 64  IEMPGATTVPAHMFFDIVRKLPEGSQVVLETTGDDT-TLEIRAGRSKFTLQMLPETDFPD 122

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               ++ + F L++S ++ L++ T FA++TEE RYYLNGI+ H        +  AVATDG
Sbjct: 123 LTAGDFSHGFTLSASDIRKLIDTTQFAISTEETRYYLNGIYLHTVDAANGQQFRAVATDG 182

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AEV   +  + MP IIVPRK VGEI ++L + ++ V++ LS+++I +  +++ ++
Sbjct: 183 HRLAQAEVSAPSGSSGMPGIIVPRKTVGEIQKLLENPEADVQIELSDTKIRITTDTVVLT 242

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDKE+RV+    ++AVDRVS +SS R +AVKL+L   +L +T
Sbjct: 243 SKLIDGTFPDYGRVIPQGNDKEMRVDRDEFKEAVDRVSTISSERGRAVKLALGDGRLVLT 302

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y   P++I FN +YLL+I + +SS     D  +FRL  S S   
Sbjct: 303 VNNPDSGSATEELAVEYESDPLEIGFNSRYLLDIANQLSS-----DTALFRLADSGSPTL 357

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+    D         +  +VLMPMR+
Sbjct: 358 IQDNTVD---------DCLFVLMPMRV 375


>gi|323135990|ref|ZP_08071073.1| DNA polymerase III, beta subunit [Methylocystis sp. ATCC 49242]
 gi|322399081|gb|EFY01600.1| DNA polymerase III, beta subunit [Methylocystis sp. ATCC 49242]
          Length = 372

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 165/387 (42%), Positives = 236/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L  LGH  R++ER+ TIP+  +VL+ A D  L +KA+  ++EIT   PA 
Sbjct: 1   MKVTIERAALLRALGHVHRVVERRTTIPILANVLIDARDDALTLKATDLDLEITEKAPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ T+ AH LYDIVRKL +GAQ+S     E G ++ +  G S F L + PES+FP 
Sbjct: 61  VGQPGATTLPAHTLYDIVRKLPEGAQVSLDASGEAG-QLTLRSGRSRFNLSTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               ++ + F+LA + LK L+E+T FA+++EE RYYLNGI+ H    +  L L AVATDG
Sbjct: 120 VTSGDFSHRFQLAPADLKRLIEKTQFAISSEETRYYLNGIYIHAMDVDGQLMLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+   A  A MP +I+PRKAV E+ R++      V V LS +++  +     ++
Sbjct: 180 HRLARLELPAPAGCADMPGVILPRKAVTEVQRLIEDAQGDVSVELSTNKMRFSFGDALLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L V      +AVDRVS +SS R +AVK++L+  KL ++
Sbjct: 240 TKLIDGTFPDYSRVIPAGNDKRLTVERDVFAKAVDRVSTISSERGRAVKMALTEGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A+E +   Y+  P+D+ FN +YLL+I   + S     D  +F+L    S   
Sbjct: 300 VTNPDQGSAVEELEADYDGAPLDVGFNARYLLDITQQLDS-----DTALFKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D           +A YVLMPMR+
Sbjct: 355 IQDRD---------GASALYVLMPMRV 372


>gi|158422637|ref|YP_001523929.1| DNA polymerase III subunit beta [Azorhizobium caulinodans ORS 571]
 gi|158329526|dbj|BAF87011.1| DNA polymerase III beta chain [Azorhizobium caulinodans ORS 571]
          Length = 372

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 164/387 (42%), Positives = 240/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+++L+ L H  R++ER+NTIP+  +VL++     L +KA+  ++E+   +PA 
Sbjct: 1   MKVTVERAELLKSLSHVHRVVERRNTIPILANVLIRTGTNGLSLKATDLDLEVVETVPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH+LYDIVRKL DG+Q+      E G  + +  G + F LQ+ PE++FP 
Sbjct: 61  VGQDGATTVPAHVLYDIVRKLPDGSQVQLEAGGERGN-LTVRAGRARFTLQTLPEADFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               ++ +SF++  +  + LV++T FA++TEE RYYLNGI+ H+ +     KL AVATDG
Sbjct: 120 LAAGDFSHSFKVKGAEFRRLVDKTQFAISTEETRYYLNGIYLHVADAAGTAKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE+D     A +P +IVPRK V EI ++L  KD+ V VSLS ++I + + ++ ++
Sbjct: 180 HRLAQAELDAPEGSAGLPGVIVPRKTVAEIQKLLEDKDAEVTVSLSTTKIRVAVGAIVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L V+ ++   AVDRVS +SS R +AVKLS+   KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPAGNDKILLVDKSDFAAAVDRVSTVSSERGRAVKLSIQDGKLTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   +       D    +L    S   
Sbjct: 300 VTNPDSGSATEELEVDYAAEPLDIGFNSRYLLDITSQLEG-----DTAELKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R            K ++ YVLMPMR+
Sbjct: 355 VRDS---------TKTDSLYVLMPMRV 372


>gi|299133398|ref|ZP_07026593.1| DNA polymerase III, beta subunit [Afipia sp. 1NLS2]
 gi|298593535|gb|EFI53735.1| DNA polymerase III, beta subunit [Afipia sp. 1NLS2]
          Length = 372

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 244/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A++  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLIRADNARLSLKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   GS TV AH+ YDIVRKL DG+QI    + E    + I  G S F LQ+ PES+FP 
Sbjct: 61  IATGGSTTVPAHMFYDIVRKLPDGSQIVLESDGERAV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF L+++ +K L++RT FA++TEE RYYLNGI+ H   + ++  L AVATDG
Sbjct: 120 LAAGEMTHSFTLSAADMKRLIDRTQFAISTEETRYYLNGIYLHAAGSGKEQTLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ +      MP +IVPRK VGE+ R++   ++ + + LS+ +I   + ++ ++
Sbjct: 180 HRLAQFDLPLPKSAVGMPGVIVPRKTVGEVQRLIEDNEAEISIELSQGKIRFTLANVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +N+KEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNEKELIVDKRDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       D  V +L    S   
Sbjct: 300 VVNPDSGSATEELEVEYASDPLDIGFNSRYLLDIAAQIQG-----DAAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           ++ K            +A YVLMPMR+
Sbjct: 355 VQDK---------ANRDALYVLMPMRV 372


>gi|86355975|ref|YP_467867.1| DNA polymerase III subunit beta [Rhizobium etli CFN 42]
 gi|86280077|gb|ABC89140.1| DNA polymerase III, beta chain protein [Rhizobium etli CFN 42]
          Length = 372

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 185/387 (47%), Positives = 259/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PA+
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQNLDMKATDLDLEITEATPAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      E G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLSDGAEVLLATSTEGG-SMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   +  +LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + ++ V V +S+++I + I S+ ++
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEAIVTVEVSDAKIRMTIGSIVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT   QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTTFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDSMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|90420503|ref|ZP_01228410.1| DNA polymerase III, beta subunit [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335231|gb|EAS48984.1| DNA polymerase III, beta subunit [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 374

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 171/389 (43%), Positives = 246/389 (63%), Gaps = 19/389 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I +ERS++L+ L H  R++ER+NTIP+  +VLL+     L +KA+  ++EIT + PA+
Sbjct: 1   MRIIIERSNLLKSLAHVHRVVERRNTIPILSNVLLKTEGEGLRLKATDLDLEITESAPAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
            +  G+ TV AHLLYDIVRKL DGA++S     E GT++ +S G SNF LQ  PES+FP 
Sbjct: 61  GEQEGATTVPAHLLYDIVRKLPDGAEVSLATNAE-GTQMTVSSGRSNFRLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                  ++F+L ++ L  L+ERT FA++TEE RYYLNGI+ H    + DL+L AVATDG
Sbjct: 120 ITAGTLSHAFKLKAAELGRLIERTQFAISTEETRYYLNGIYLHTIEADGDLQLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLS--ESRIHLNIESLS 236
           HRLA A+    A    MP II+PRK VGE+ ++L   +   ++S+   +++I   I ++ 
Sbjct: 180 HRLARADQKAPAGSEGMPGIIIPRKTVGELQKLLGDSNDEAEISVELSDAKIRFTIGAVV 239

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           M+ +LIDG FP+YQ VIP +NDK L ++      AVDRVS +SS R +AVKL+++  +L 
Sbjct: 240 MTSKLIDGTFPDYQRVIPQNNDKALTLDRQTFSAAVDRVSTISSERGRAVKLAVADSQLV 299

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           +TV++PD G A E + V Y+   ++I FN KYLL+I + +S      DE VF L    S 
Sbjct: 300 LTVNSPDSGTATEELAVGYDSDEIEIGFNAKYLLDITNQLSG-----DETVFMLADPGSP 354

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             I+    D+           YVLMPMR+
Sbjct: 355 TLIKDGGDDAT---------LYVLMPMRV 374


>gi|190889986|ref|YP_001976528.1| DNA polymerase III, beta chain protein [Rhizobium etli CIAT 652]
 gi|190695265|gb|ACE89350.1| DNA polymerase III, beta chain protein [Rhizobium etli CIAT 652]
          Length = 372

 Score =  291 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 184/387 (47%), Positives = 261/387 (67%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQNLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      + G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLSDGSEVLLATSTDGG-SMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   ++ +LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESKGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + ++ V V +S+++I + I S+ ++
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEAIVTVEVSDAKIRMTIGSIVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT+  QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTSFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|327192029|gb|EGE59010.1| DNA polymerase III subunit beta [Rhizobium etli CNPAF512]
          Length = 372

 Score =  291 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 184/387 (47%), Positives = 259/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQNLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      + G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLSDGSEVLLATSTDGG-SMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   +  +LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + ++ V V +S+++I + I S+ ++
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEAIVTVEVSDAKIRMTIGSIVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT   QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTTFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|218509914|ref|ZP_03507792.1| DNA polymerase III subunit beta [Rhizobium etli Brasil 5]
          Length = 372

 Score =  291 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 184/387 (47%), Positives = 260/387 (67%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PAS
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQNLDMKATDLDLEITEATPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      + G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLSDGSEVLLATSTDGG-SMTVQSGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   ++ +LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESKGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + ++ V V +S+++I + I S+ ++
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEAIVTVEVSDAKIRMTIGSIVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+CT   QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTTFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|304392440|ref|ZP_07374381.1| DNA polymerase III, beta subunit [Ahrensia sp. R2A130]
 gi|303295544|gb|EFL89903.1| DNA polymerase III, beta subunit [Ahrensia sp. R2A130]
          Length = 371

 Score =  291 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 170/387 (43%), Positives = 243/387 (62%), Gaps = 18/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ER+++L+ L H  R++ER+NTIP+  +VLL+A DG L +KA+  ++E+T    A 
Sbjct: 1   MRLTLERANLLKSLNHVQRVVERRNTIPILSNVLLKAEDGGLMLKATDLDLEVTEKTTAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSAH LYDIVRKL DG+Q+    +   G  + +  G S F LQ  PES+FP 
Sbjct: 61  VEQSGATTVSAHTLYDIVRKLPDGSQVLLAVDESNG--LLVRAGRSQFRLQMLPESDFPD 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               E+ ++F +  +  K L++RT FA++TEE RYYLNGI+ H    +    L AVATDG
Sbjct: 119 LTAAEFTHTFRMGCADFKALIDRTQFAISTEETRYYLNGIYLHAVEADGKEMLRAVATDG 178

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+ +     + MP IIVPRK VGEI ++L   D+ V V LS+S+I   +  + ++
Sbjct: 179 HRLAQAQTEAPDGASGMPGIIVPRKTVGEIQKLLEDPDAFVTVELSDSKIRFTVGEVVLT 238

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  N KEL ++      AVDRVS ++S R +AVKLS+S  +L ++
Sbjct: 239 SKLIDGTFPDYNRVIPSGNTKELLLDRATFSSAVDRVSTIASDRGRAVKLSISDGQLTLS 298

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y++  MDI FN +YLL+I + +S+     +E  F L  + S   
Sbjct: 299 VNNPDSGSAEEELAVGYSDDDMDIGFNSRYLLDITNQLSA-----EETTFMLADAGSPTL 353

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR K +D          A YVLMPMR+
Sbjct: 354 IREKGQD---------GALYVLMPMRV 371


>gi|146337177|ref|YP_001202225.1| DNA polymerase III subunit beta [Bradyrhizobium sp. ORS278]
 gi|146189983|emb|CAL73975.1| DNA polymerase III, beta-subunit [Bradyrhizobium sp. ORS278]
          Length = 372

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 168/387 (43%), Positives = 240/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L ++A+  ++E+T  + A 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENARLSLRATDLDLEVTETLAAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + E    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLESDGERAV-LAIRAGRSKFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  ++F + +  +K+L++RT FA++TEE RYYLNGI+ H     +   L AVATDG
Sbjct: 120 LAAGEMTHAFGVPAKDIKSLIDRTQFAISTEETRYYLNGIYLHAGGTAKQPTLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++   +  A+MP +IVPRK VGE+ R++   DS +K+ LS+ +I   +  + ++
Sbjct: 180 HRLAQVDLPQPSGAAEMPGVIVPRKTVGEVQRLIEDNDSEIKIELSQGKIRFTLGQVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKADFAAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V RL    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EVAVLRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D           NA YVLMPMR+
Sbjct: 355 IQDRDN---------RNALYVLMPMRV 372


>gi|39933082|ref|NP_945358.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris CGA009]
 gi|39652707|emb|CAE25446.1| DNA polymerase III beta subunit [Rhodopseudomonas palustris CGA009]
          Length = 372

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 240/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ L H  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLSHVHRVVERRNTIPILGNVLVRAENAQLALKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + +    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLESDGDRSV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  ++F L +S +K L++RT FA++TEE RYYLNGI+ H   + +   L AVATDG
Sbjct: 120 LAAGEMSHAFRLPASDVKRLIDRTQFAISTEETRYYLNGIYLHTAGSPKASSLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ + +    MP +IVPRK VGE+ R++   ++ + + LS  +I   + ++ ++
Sbjct: 180 HRLAQLDLTLPSGADGMPGVIVPRKTVGEVQRLIEDTEAEIGIELSTGKIRFTLGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELLVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDPLDIGFNSRYLLDIAAQIEG-----EVAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D  S         A YVLMPMR+
Sbjct: 355 IQDRDSKS---------ALYVLMPMRV 372


>gi|316931398|ref|YP_004106380.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris DX-1]
 gi|315599112|gb|ADU41647.1| DNA polymerase III, beta subunit [Rhodopseudomonas palustris DX-1]
          Length = 372

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 239/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ L H  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLSHVHRVVERRNTIPILGNVLVRAENAQLALKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + +    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLESDGDRSV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  ++F L +S +K L++RT FA++TEE RYYLNGI+ H   +     L AVATDG
Sbjct: 120 LAAGEMSHAFRLPASDVKRLIDRTQFAISTEETRYYLNGIYLHTAGSSGAASLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ + +    MP +IVPRK VGE+ R++   ++ + + LS  +I   + ++ ++
Sbjct: 180 HRLAQLDLTLPSGADGMPGVIVPRKTVGEVQRLIEDTEAEIGIELSTGKIRFTLGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELLVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       +  V RL    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDPLDIGFNSRYLLDIAAQIEG-----EVAVLRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D  S         A YVLMPMR+
Sbjct: 355 IQDRDSKS---------ALYVLMPMRV 372


>gi|86747129|ref|YP_483625.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris HaA2]
 gi|86570157|gb|ABD04714.1| DNA polymerase III, beta subunit [Rhodopseudomonas palustris HaA2]
          Length = 372

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 176/387 (45%), Positives = 244/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENAQLSLKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + +    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLESDGDRSV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF L +S +K L++RT FA++TEE RYYLNGI+ H   + +D KL AVATDG
Sbjct: 120 LAAGEMSHSFSLTASDVKRLIDRTQFAISTEETRYYLNGIYLHTAGSAKDAKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++   A  A MP +IVPRK VGE+ R++   D+ + + LS  +I   I ++ ++
Sbjct: 180 HRLAQVDLTQPAGAAGMPGVIVPRKTVGEVQRLIEDNDAEIGLELSVGKIRFTIGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       +  V RL    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDPLDIGFNSRYLLDIAAQIEG-----EVAVLRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D         K NA YVLMPMR+
Sbjct: 355 IQDRD---------KKNALYVLMPMRV 372


>gi|192288435|ref|YP_001989040.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris TIE-1]
 gi|192282184|gb|ACE98564.1| DNA polymerase III, beta subunit [Rhodopseudomonas palustris TIE-1]
          Length = 372

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 241/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ L H  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLSHVHRVVERRNTIPILGNVLVRAENAQLALKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + +    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLESDGDRSV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  ++F L +S +K L++RT FA++TEE RYYLNGI+ H   + +   L AVATDG
Sbjct: 120 LAAGEMSHAFRLPASDVKRLIDRTQFAISTEETRYYLNGIYLHTAGSPKASSLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ + +    MP +IVPRK VGE+ R++   ++ + + LS  +I   + ++ ++
Sbjct: 180 HRLAQLDLTLPSGADGMPGLIVPRKTVGEVQRLIEDTEAEIGIELSTGKIRFTLGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKELRV+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELRVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDPLDIGFNSRYLLDIAAQIEG-----EVAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D  S         A YVLMPMR+
Sbjct: 355 IQDRDSKS---------ALYVLMPMRV 372


>gi|154243960|ref|YP_001414918.1| DNA polymerase III subunit beta [Xanthobacter autotrophicus Py2]
 gi|154158045|gb|ABS65261.1| DNA polymerase III, beta subunit [Xanthobacter autotrophicus Py2]
          Length = 373

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 164/388 (42%), Positives = 239/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+++L+ L H  R++ER+NTIP+  +VL++A    LE+KA+  ++E+  ++PA 
Sbjct: 1   MKVTVERAELLKSLSHVHRVVERRNTIPILANVLIKAGKNGLELKATDLDLEVVESVPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G+ TV AH+LYDIVRKL +GAQ+      E G  + +    + F LQ+ PE++FP 
Sbjct: 61  TGQAGATTVPAHVLYDIVRKLPEGAQVQLEAGGERG-TLTVKASRARFSLQTLPEADFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEE---DLKLCAVATD 177
               E+ ++F++  +  + LV++T FA++TEE RYYLNGI+ H+ E       L AVATD
Sbjct: 120 LAAGEFSHTFKVKGADFRRLVDKTQFAISTEETRYYLNGIYLHVTEGAGGKSMLRAVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA AE++  A  A +P +IVPRK V EI ++L  K++   VSLS ++I + + S+ +
Sbjct: 180 GHRLAQAELEAPAGAAGLPGVIVPRKTVAEIQKLLEDKEAEATVSLSTTKIRVQVGSIVL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP+Y  VIP  NDK L V+      AVDRVS +SS R +AVKLSL+  K+ +
Sbjct: 240 TSKLIDGTFPDYGRVIPQGNDKTLIVDKDEFAAAVDRVSTVSSERGRAVKLSLAEGKMTL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V NPD G A E + V Y   P+DI FN +YLL+I   +       D    +L    S  
Sbjct: 300 SVTNPDSGSATEELEVDYTAEPLDIGFNSRYLLDITSQLEG-----DTAELKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R            K +A YVLMPMR+
Sbjct: 355 LVRDS---------TKTDALYVLMPMRV 373


>gi|90019651|ref|YP_525478.1| DNA polymerase III subunit beta [Saccharophagus degradans 2-40]
 gi|89949251|gb|ABD79266.1| DNA polymerase III, beta subunit [Saccharophagus degradans 2-40]
          Length = 367

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 204/386 (52%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V R  IL+ L     ++ER+ T+PV  +VL+      L +  +  E+EI G +   
Sbjct: 1   MKFIVSRETILKPLQLVAGVVERRQTLPVLANVLIVLEGEQLSLTGTDLEVEIVGRVTVD 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A    DI R L DG+ I F  +++   +V +  G S F L S   +EFP
Sbjct: 61  QAISEGEITVPAKKFLDICRALPDGSVIEFTLDDQ---KVTVKSGRSRFTLSSLSANEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++     +F      +K L++RT FAMA +++RYYLNG+ + +      L  V+TDGH
Sbjct: 118 AVEQGSNDINFSCEQKEVKRLIDRTAFAMAQQDVRYYLNGMLWEVRAG--ALRVVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+    I   +A+    I+PRK V E+ R+L+  + +V++++  + I       + + 
Sbjct: 176 RLAMCTRPINIDVAEPVQAILPRKGVIELSRLLNDSEENVELTMGPNHIRATTTEYTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +      L+QA  R +I+S+ + + V+L L + +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKIVLGERAVLKQAFARTAILSNEKYRGVRLLLETGQLTIIA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A + + V Y    +++ FN  YL ++ + + +     D++   L  SNSS  +
Sbjct: 296 NNPEQEEAEDQVAVEYEGDSIEVGFNVSYLQDVTNVLDT-----DKIKMTLSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           ++ YV+MPMR+
Sbjct: 351 EEPEN---------ADSVYVVMPMRL 367


>gi|307301232|ref|ZP_07580994.1| DNA polymerase III, beta subunit [Sinorhizobium meliloti BL225C]
 gi|307317903|ref|ZP_07597340.1| DNA polymerase III, beta subunit [Sinorhizobium meliloti AK83]
 gi|306896305|gb|EFN27054.1| DNA polymerase III, beta subunit [Sinorhizobium meliloti AK83]
 gi|306903688|gb|EFN34275.1| DNA polymerase III, beta subunit [Sinorhizobium meliloti BL225C]
          Length = 372

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 184/387 (47%), Positives = 253/387 (65%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+++   LE+KA+  ++EIT A PA 
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRSDGASLEMKATDLDLEITEATPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      E GT + ++ G S F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGSEVRLATNAE-GTAMTVASGRSKFSLQCLPQSDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF L +  LK L++RT FA++TEE RYYLNGIF H   +  DLKL AVATDG
Sbjct: 120 LTAGTFSHSFRLKAPDLKMLIDRTQFAISTEETRYYLNGIFVHTVESNGDLKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+V+  +    MP II+PRK V E+ ++L S D  V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVEAPSGSEGMPGIIIPRKTVSELQKLLDSPDVVVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP SNDKELRV+C +  QAVDRVS +SS R +AVKL+L+  ++ +T
Sbjct: 240 SKLIDGTFPDYQRVIPASNDKELRVDCQSFSQAVDRVSTISSERGRAVKLALADGQMTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y   P++I FN KYLL+I   ++       E VF L    S   
Sbjct: 300 VNNPDSGSATEELPVGYESDPLEIGFNAKYLLDITGQLTGS-----EAVFLLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R              +A YVLMPMR+
Sbjct: 355 VRD---------LAAEDALYVLMPMRV 372


>gi|222084599|ref|YP_002543128.1| DNA polymerase III, beta subunit [Agrobacterium radiobacter K84]
 gi|221722047|gb|ACM25203.1| DNA polymerase III, beta subunit [Agrobacterium radiobacter K84]
          Length = 372

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 257/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A    L++KA+  ++EIT A PA+
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKAEGANLDMKATDLDLEITEATPAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      + G  + ++ G S F LQ  PES+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGSEVLLATNPDGG-SMTVASGRSKFSLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH   +E DLKL AVATDG
Sbjct: 120 LTAGSFSHSFKLKAADLKMLIDRTQFAISTEETRYYLNGIFFHTIESEGDLKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+V   +    MP II+PRK VGE+ +++ S D  V V +S+++I   I S+ M+
Sbjct: 180 HRLARADVSAPSGSEGMPGIIIPRKTVGELQKLVDSPDVIVTVEVSDAKIRTTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP +NDKE+RV+C +  QAVDRVS +SS R +AVKL+LS  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTNNDKEMRVDCQSFAQAVDRVSTISSERGRAVKLALSDGQLLLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      D  +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----DAAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372


>gi|325291735|ref|YP_004277599.1| DNA polymerase III beta subunit [Agrobacterium sp. H13-3]
 gi|325059588|gb|ADY63279.1| DNA polymerase III beta subunit [Agrobacterium sp. H13-3]
          Length = 378

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 177/387 (45%), Positives = 259/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PA 
Sbjct: 7   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRASGANLDMKATDLDLEITEATPAM 66

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLY+IVRKL DG+++      + G+ + ++ G S F LQ  PE++FP 
Sbjct: 67  VEQAGATTVPAHLLYEIVRKLPDGSEVLLATNPD-GSTMTVASGRSKFSLQCLPETDFPD 125

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + ++F+L ++ LK L++RT FA++TEE RYYLNGIFFH   +  DLKL AVATDG
Sbjct: 126 LTAGTFSHTFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGDLKLRAVATDG 185

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + +  V V +S+++I L I S+ ++
Sbjct: 186 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLMDNPELDVTVEVSDAKIRLTIGSVVLT 245

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+C    +AVDRVS +SS R +AVKL+L++ +L +T
Sbjct: 246 SKLIDGTFPDYQRVIPTGNDKEMRVDCQTFARAVDRVSTISSERGRAVKLALTNGQLTLT 305

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      ++ +F L  + S   
Sbjct: 306 VNNPDSGSATEEVAVGYDNDSMEIGFNAKYLLDITSQLSG-----EDAIFLLADAGSPTL 360

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    D         +A YVLMPMR+
Sbjct: 361 VRDTAGD---------DALYVLMPMRV 378


>gi|222147282|ref|YP_002548239.1| DNA polymerase III subunit beta [Agrobacterium vitis S4]
 gi|221734272|gb|ACM35235.1| DNA polymerase III beta subunit [Agrobacterium vitis S4]
          Length = 412

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 175/387 (45%), Positives = 250/387 (64%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A    L +KA+  ++E+T A PA+
Sbjct: 41  MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRAEGQSLSMKATDLDLEVTEATPAN 100

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ TV AHLLY+IVRKL DGA++      + G  + ++ G S F LQ  PE +FP 
Sbjct: 101 IEQAGATTVPAHLLYEIVRKLSDGAEVLLSTNPD-GASMTVASGRSKFSLQCLPEQDFPD 159

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF+L +S LK L++RT FA++TEE RYYLNGI+ H    +  LKL AVATDG
Sbjct: 160 LTTGSFSHSFKLKASDLKMLIDRTQFAISTEETRYYLNGIYLHTIEADGKLKLRAVATDG 219

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+V+  +    MP II+PRK VGE+ +++ + D  V + +S+++I  NI  + M+
Sbjct: 220 HRLARADVEAPSGSEGMPGIIIPRKTVGELQKLVDNPDLIVALEVSDAKIRFNIGEIVMT 279

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP +NDKE+RV+C    +AVDRVS +SS R +AVKL++    L +T
Sbjct: 280 SKLIDGTFPDYQRVIPQANDKEMRVDCQTFARAVDRVSTISSERGRAVKLAIGDGHLMLT 339

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y    M+I FN KYLL+I   +S      +E +F L  + S   
Sbjct: 340 VNNPDSGSATEEVAVGYESDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 394

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR    D         +A YVLMPMR+
Sbjct: 395 IRDTAGD---------DALYVLMPMRV 412


>gi|15964088|ref|NP_384441.1| DNA polymerase III subunit beta [Sinorhizobium meliloti 1021]
 gi|15073264|emb|CAC41772.1| Probable DNA polymerase III, beta chain [Sinorhizobium meliloti
           1021]
          Length = 372

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 184/387 (47%), Positives = 253/387 (65%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+++   LE+KA+  ++EIT A PA 
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRSDGASLEMKATDLDLEITEATPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      E GT + ++ G S F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGSEVRLATNAE-GTAMTVASGRSKFSLQCLPQSDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF L +  LK L++RT FA++TEE RYYLNGIF H   +  DLKL AVATDG
Sbjct: 120 LTAGTFSHSFRLKAPDLKMLIDRTQFAISTEETRYYLNGIFVHTVESNGDLKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+V+  +    MP II+PRK V E+ ++L S D  V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVEAPSGSEGMPGIIIPRKTVSELQKLLDSPDVVVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP SNDKELRV+C +  QAVDRVS +SS R +AVKL+L+  ++ +T
Sbjct: 240 SKLIDGTFPDYQRVIPASNDKELRVDCQSFSQAVDRVSTISSERGRAVKLALADGQMTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y   P++I FN KYLL+I   ++       E VF L    S   
Sbjct: 300 VNNPDSGSATEELPVGYESDPLEIGFNAKYLLDITGQLTG-----GEAVFLLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R              +A YVLMPMR+
Sbjct: 355 VRD---------LAAEDALYVLMPMRV 372


>gi|163757766|ref|ZP_02164855.1| DNA polymerase III subunit beta [Hoeflea phototrophica DFL-43]
 gi|162285268|gb|EDQ35550.1| DNA polymerase III subunit beta [Hoeflea phototrophica DFL-43]
          Length = 372

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 180/387 (46%), Positives = 253/387 (65%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLL+A    L++KA+  ++EIT A PA 
Sbjct: 1   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLKAEGATLDMKATDLDLEITEATPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  GS TV AHLLYDIVRKL DG+++      + G  + ++ G S F LQ  PES+FP 
Sbjct: 61  IEQAGSTTVPAHLLYDIVRKLSDGSEVMLATNPD-GASMTVASGRSKFTLQCLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + ++F L ++ LK L++RT FA++TEE RYYLNGIF H   +E  LKL AVATDG
Sbjct: 120 LTAGAFSHTFRLPATELKMLIDRTQFAISTEETRYYLNGIFVHTIESEGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGEI +++ + D +V V +S+++I   I S+ M+
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGEIQKLVDNPDLTVTVEVSDAKIRFTIGSVVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKEL V+C    QAVDRVS +SS R +AVKL+++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKELTVDCQTFAQAVDRVSTISSERGRAVKLAIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+  P++I FN KYLL+I + +S       + VF L    S   
Sbjct: 300 VNNPDSGSATEELAVGYDRDPIEIGFNAKYLLDITNQLSGT-----DAVFLLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    D         +A YVLMPMR+
Sbjct: 355 VRDTAGD---------DALYVLMPMRV 372


>gi|118590459|ref|ZP_01547861.1| DNA polymerase III subunit beta [Stappia aggregata IAM 12614]
 gi|118436922|gb|EAV43561.1| DNA polymerase III subunit beta [Stappia aggregata IAM 12614]
          Length = 372

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 173/387 (44%), Positives = 252/387 (65%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ER+D+L+ L H  R++ER+NTIP+  +VLL+A+ G + +KA+  ++EI  ++PA 
Sbjct: 1   MKATLERTDLLKSLTHVHRVVERRNTIPILSNVLLRADGGAINLKATDLDLEIVESVPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +++ G+ TV AH+ YDIVRKL +G+Q+     ++    + I  G S F LQ  PE++FP 
Sbjct: 61  IEMPGATTVPAHMFYDIVRKLPEGSQVVLETTSD-NATLEIRAGRSKFTLQMLPETDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               ++ +SF L  + ++ L++ T FA++TEE RYYLNGI+ H       L+  AVATDG
Sbjct: 120 LTAGDFSHSFSLTGADIRKLIDATQFAISTEETRYYLNGIYLHTVDAGSGLQFRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AEV   +  A MP IIVPRK VGEI ++L S ++SV+V LS+++I L   S+ ++
Sbjct: 180 HRLAQAEVPAPSGSAGMPGIIVPRKTVGEIQKLLESPEASVQVELSDTKIRLTTGSVILT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKE+RV+    ++AVDRVS +SS R +AVKLSL+   L +T
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKEMRVDRDEFKEAVDRVSTISSERGRAVKLSLTEGHLVLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+  P+DI FN +YLL+I + +SS     D  +FRL  S S   
Sbjct: 300 VNNPDSGSATEELAVEYDAEPLDIGFNSRYLLDIANQLSS-----DTALFRLADSGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+    D         +  +VLMPMR+
Sbjct: 355 IQDNTVD---------DCLFVLMPMRV 372


>gi|227824176|ref|YP_002828149.1| DNA polymerase III subunit beta [Sinorhizobium fredii NGR234]
 gi|227343178|gb|ACP27396.1| DNA polymerase III, beta subunit [Sinorhizobium fredii NGR234]
          Length = 372

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 181/387 (46%), Positives = 253/387 (65%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+++   LE+KA+  ++EIT A PA 
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRSDGASLEMKATDLDLEITEATPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      E GT + ++ G S F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGSEVRLATNAE-GTAMTVASGRSKFSLQCLPQSDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL--KLCAVATDG 178
                + +SF L ++ LK L++RT FA++TEE RYYLNGIF H  E     KL AVATDG
Sbjct: 120 LTAGSFSHSFRLKATDLKMLIDRTQFAISTEETRYYLNGIFVHTVENKGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+++  A    MP II+PRK V E+ ++L + D  V   +S+++I L I S+ M+
Sbjct: 180 HRLARADIEAPAGSEGMPGIIIPRKTVSELQKLLDTPDVVVTAEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKELRV+C +  QAVDRVS +SS R +AVKL+L+  ++ +T
Sbjct: 240 SKLIDGTFPDYQRVIPAGNDKELRVDCQSFAQAVDRVSTISSERGRAVKLALTDGQMTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A+E + V Y   P++I FN KYLL+I   ++ +     E VF L    S   
Sbjct: 300 VNNPDSGSAMEELPVGYENDPLEIGFNAKYLLDITAQLTGN-----EAVFMLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    D         +A YVLMPMR+
Sbjct: 355 VRDLAAD---------DALYVLMPMRV 372


>gi|120552946|ref|YP_957297.1| DNA polymerase III, beta subunit [Marinobacter aquaeolei VT8]
 gi|120322795|gb|ABM17110.1| DNA polymerase III, beta subunit [Marinobacter aquaeolei VT8]
          Length = 367

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 214/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAI-PA 59
           MK+T+ R  ++  L     ++E+K T+PV  +VLL+A D  L +  +  E+E+   + P 
Sbjct: 1   MKLTISRESLITPLQSIAGVVEKKQTMPVLSNVLLEAEDNTLTLTGTNMEVELVARVAPV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  G ITV A  L DI R L D A I    E   G  +++  G+S+F L + P   FP
Sbjct: 61  HVDQPGRITVPARKLADICRALGDEAPIDLALE---GDRLHLRSGNSHFTLSTLPAEHFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++E   +   L    L  +++ T FAMA +++RYYLNG+   ++        VATDGH
Sbjct: 118 NVEDEPESFRLALPQKELGRMLDATAFAMAQQDVRYYLNGLLLEVDVNH--ARVVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A++D+     ++  +IVPRK V E+ R+L  ++S V + + ++ +   + S + + 
Sbjct: 176 RLAMAQLDLDTGCPELRQVIVPRKGVLELARLLDDEESPVTLVIGDNHLRATVGSYTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LI+G+FP+Y  VIP   DK +  + + L+  + R  I+S   I+ V+L+LS ++L +  
Sbjct: 236 KLIEGKFPDYNRVIPRGGDKTVLADRSTLKSTLQRAGILSHENIRGVRLNLSPNQLQVFA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NPD  +A +++ V Y    + I FN  YL+++++ +      DD+V   L + NSS  I
Sbjct: 296 NNPDQEQAEDALPVEYQGESLQIGFNVGYLVDVMNALD-----DDQVKITLSNPNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
             ++ +            YV+MPMR+
Sbjct: 351 EAQNDN---------RCLYVVMPMRL 367


>gi|332304388|ref|YP_004432239.1| DNA polymerase III, beta subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332171717|gb|AEE20971.1| DNA polymerase III, beta subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 367

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 219/386 (56%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R + L+ L      +ER++T+P+  +VL++ +D  L +  +  E+E+   +  +
Sbjct: 1   MKFSISRENFLQPLQLVSGAVERRHTLPILSNVLIKVSDNALWLTGTDLEVELISNVTLT 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G ITV A  L DI+R L +G++ISF  +   G++  I  G S + L +   +++P
Sbjct: 61  GELEEGEITVPAKKLLDIIRGLAEGSEISFHID---GSKAIIRCGRSKYSLSTLSATDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    FE++ S LK L++  HF+MA +++RYYLNG+     +    +  VATDGH
Sbjct: 118 NLEDWQGELEFEISQSNLKRLIDSVHFSMAQQDVRYYLNGMSLETEDN--VIRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  ++          +I+PRK V EI R++   D S+KV +  + I +       + 
Sbjct: 176 RLALCRLNYTDATLPNRQVIIPRKGVMEITRLIEDSDKSLKVQVGSNHIRIFSNDFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+ A  R SI+S+ + + V+L+LSS ++ +T 
Sbjct: 236 KLVDGRFPDYRRVLPKDGDKNIIASKLGLKNAFSRASILSNEKFKGVRLNLSSGEVKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A+E ++V Y    ++I FN  YL+++++ +++     +EV F L  SNSS  I
Sbjct: 296 NNPEQEEAVEIVDVDYQGDDLEIGFNVAYLIDVLNALNA-----EEVKFTLADSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                DS         A YV+MPMR+
Sbjct: 351 EDGSDDS---------ALYVIMPMRL 367


>gi|209883689|ref|YP_002287546.1| DNA polymerase III, beta subunit [Oligotropha carboxidovorans OM5]
 gi|209871885|gb|ACI91681.1| DNA polymerase III, beta subunit [Oligotropha carboxidovorans OM5]
          Length = 372

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 243/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLIRAENAKLSLKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   GS TV AH+ YDIVRKL DG+QI    + E    + I  G S F LQ+ PES+FP 
Sbjct: 61  IATGGSTTVPAHMFYDIVRKLPDGSQIVLESDGERAV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF L ++ +K L++RT FA++TEE RYYLNGI+ H   +  +  L AVATDG
Sbjct: 120 LAAGEMTHSFTLTAADVKRLIDRTQFAISTEETRYYLNGIYLHAAGSAAEQTLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ +    A MP +IVPRK VGE+ R++   ++ + + LS+++I   + ++ ++
Sbjct: 180 HRLAQFDLPLPKSAAGMPGVIVPRKTVGEVQRLIEDTEAEIAIELSQAKIRFTLANVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +N+KEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNEKELVVDKRDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VVNPDSGSATEELEVEYASDPLDIGFNSRYLLDIAAQIQG-----EAAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           ++ K            +A YVLMPMR+
Sbjct: 355 VQDK---------ANRDALYVLMPMRV 372


>gi|159184247|ref|NP_353331.2| DNA polymerase III subunit beta [Agrobacterium tumefaciens str.
           C58]
 gi|159139574|gb|AAK86116.2| DNA polymerase III, beta chain [Agrobacterium tumefaciens str. C58]
          Length = 372

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 176/387 (45%), Positives = 258/387 (66%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PA 
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRASGANLDMKATDLDLEITEATPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLY+IVRKL DG+++      + G+ + ++ G S F LQ  PE++FP 
Sbjct: 61  VEQAGATTVPAHLLYEIVRKLPDGSEVLLATNPD-GSSMTVASGRSKFSLQCLPEADFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + ++F+L ++ LK L++RT FA++TEE RYYLNGIFFH   +  +LKL AVATDG
Sbjct: 120 LTAGTFSHTFKLKAADLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+VD  +    MP II+PRK VGE+ +++ + +  V V +S+++I L I S+ ++
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLMDNPELEVTVEVSDAKIRLAIGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKE+RV+C    +AVDRVS +SS R +AVKL+L+  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCQTFARAVDRVSTISSERGRAVKLALTDGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+   M+I FN KYLL+I   +S      ++ +F L  + S   
Sbjct: 300 VNNPDSGSATEEVAVGYDNDSMEIGFNAKYLLDITSQLSG-----EDAIFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    D         +A YVLMPMR+
Sbjct: 355 VRDTAGD---------DALYVLMPMRV 372


>gi|254472242|ref|ZP_05085642.1| DNA polymerase III, beta subunit [Pseudovibrio sp. JE062]
 gi|211958525|gb|EEA93725.1| DNA polymerase III, beta subunit [Pseudovibrio sp. JE062]
          Length = 372

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 242/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+++L+ L H  R++ER+NTIP+  +V+LQA  G L++KA+  ++E+  +I A 
Sbjct: 1   MKVTLERTELLKSLTHVHRVVERRNTIPILSNVMLQAEGGNLKLKATDLDLEVVESIAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AH++Y+IVRKL DG+Q+      +    + I  G S F LQ  P ++FP 
Sbjct: 61  VETPGATTVPAHMIYEIVRKLPDGSQVVLETSGDDS-TMEIRAGRSRFALQILPVTDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E+ +SF + +  ++ L++ T FA++TEE RYYLNGI+ H     E L+  AVATDG
Sbjct: 120 LTAGEFSHSFTMTAGGIRKLIDSTQFAISTEETRYYLNGIYMHSLDIGEGLRFRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++       MP IIVPRK VGEI ++L   +  +KV +SE++I   I  + ++
Sbjct: 180 HRLAQAELEAPEGSDGMPGIIVPRKTVGEIQKLLDDPEVEIKVEISETKIRFTIGDIILT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDKELRV+    ++AVDRVS ++S R +AVK++LS  K+ +T
Sbjct: 240 SKLIDGTFPDYERVIPKGNDKELRVDRDVFKEAVDRVSTIASDRGRAVKMALSEGKIVLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y+    +I FN KYLL+I   + +     D  +F L  S S   
Sbjct: 300 VTNPDSGTATEEVAVEYDNEEFEIGFNSKYLLDIAAQLEA-----DTALFTLADSGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR +  D          A YVLMPMR+
Sbjct: 355 IRDEGSDE---------AIYVLMPMRV 372


>gi|307942711|ref|ZP_07658056.1| DNA polymerase III, beta subunit [Roseibium sp. TrichSKD4]
 gi|307773507|gb|EFO32723.1| DNA polymerase III, beta subunit [Roseibium sp. TrichSKD4]
          Length = 372

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 172/387 (44%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ER+D+L+ L H  R++ER+NTIP+  +VLL+A+ G L +KA+  ++EI  +IPA 
Sbjct: 1   MKATLERTDLLKSLTHVHRVVERRNTIPILSNVLLRADGGSLNLKATDLDLEIVESIPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V++ G+ TV AH+ YDIVRKL DG+Q+      +  + + I  G S F LQ  PES+FP 
Sbjct: 61  VEMGGATTVPAHMFYDIVRKLPDGSQVVLETTGD-NSTLEIRAGRSRFTLQMLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               ++ + F L +  ++ L++ T FA++TEE RYYLNGI+ H        +  AVATDG
Sbjct: 120 LTAGDFSHGFALTAGDIRKLIDTTQFAISTEETRYYLNGIYLHTVNTPSGERFRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AEV        MP IIVPRK VGEI ++L   D++V++ LSE++I +   ++ ++
Sbjct: 180 HRLAQAEVTAPNGSHGMPGIIVPRKTVGEIQKLLEEPDANVQIELSETKIRITTGAVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDKE+RV+    ++AVDRVS +SS R +AVKLSLS  ++ +T
Sbjct: 240 SKLIDGTFPDYGRVIPQGNDKEMRVDRDEFKEAVDRVSTISSERGRAVKLSLSDGRMVLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y    MDI FN +YLL+I + +SS     D  +FRL  S S   
Sbjct: 300 VNNPDSGSATEELAVEYTSDAMDIGFNSRYLLDIANQLSS-----DTALFRLADSGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+    D         +  +VLMPMR+
Sbjct: 355 IQDNTVD---------DCLFVLMPMRV 372


>gi|115522032|ref|YP_778943.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris BisA53]
 gi|115515979|gb|ABJ03963.1| DNA polymerase III, beta subunit [Rhodopseudomonas palustris
           BisA53]
          Length = 372

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 172/387 (44%), Positives = 241/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A  G L +KA+  ++E+T ++PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAEKGRLSLKATDLDLEVTESLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G+ TV AH+ YDIVRKL DG+QI    + E    + I  G S F LQ+ PE++FP 
Sbjct: 61  TATPGATTVPAHMFYDIVRKLPDGSQIVLESDGERAV-LAIRAGRSRFTLQTLPETDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL--KLCAVATDG 178
               E  +SF L +S +K L++RT FA++TEE RYYLNGI+ H     +   L AVATDG
Sbjct: 120 LAAGEMTHSFALPASDVKRLIDRTQFAISTEETRYYLNGIYLHSAGSAVAATLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ + +  A MP +IVPRK VGE+ R++   + SV + LS ++I   I  + ++
Sbjct: 180 HRLAQLDLPLPSGAAGMPGVIVPRKTVGEVQRLIEDSEVSVGIELSTNKIRFTIGDVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+ T+   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKTDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V RL    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EAAVLRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D            A YVLMPMR+
Sbjct: 355 IQDRD---------AKGALYVLMPMRV 372


>gi|84514653|ref|ZP_01002017.1| DNA polymerase III subunit beta [Loktanella vestfoldensis SKA53]
 gi|84511704|gb|EAQ08157.1| DNA polymerase III subunit beta [Loktanella vestfoldensis SKA53]
          Length = 372

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 149/387 (38%), Positives = 233/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IEI    PA 
Sbjct: 1   MKFSIERAVLLKAVAQAQSVVERRNTIPILANVLIEAQGDEVHFRATDLDIEIVDKAPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           VD  G+ TVSA  L +IVRKL DGA ++  +E+  G  + I  G SNF L + P+ +FP 
Sbjct: 61  VDRAGATTVSAVTLNEIVRKLPDGALVTLTEESATG-RLTIEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               +Y  +F   + VL+ L +++ FA++TEE RYYLNG++ H+ +      L  VATDG
Sbjct: 120 MASSDYAANFSAKAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + ++      M  +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDAELPMGAENMAGVIVPRKTVGELRKLLDDDDMKIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRRLEVDASEFARAVDRVATVSSERSRAVKLSLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V++PD G A E + V Y++  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNSPDSGAAEEELAVAYSDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAIYVVMPMRV 372


>gi|150398727|ref|YP_001329194.1| DNA polymerase III subunit beta [Sinorhizobium medicae WSM419]
 gi|150030242|gb|ABR62359.1| DNA polymerase III, beta subunit [Sinorhizobium medicae WSM419]
          Length = 372

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 182/387 (47%), Positives = 254/387 (65%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ERS++L+ L H  R++ER+NTIP+  +VLL+++   LE+KA+  ++EIT A  A 
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRSDGASLEMKATDLDLEITEATQAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DG+++      E GT + ++ G S F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGSEVLLATNAE-GTAMTVASGRSKFSLQCLPQSDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF L ++ LK L++RT FA++TEE RYYLNGIF H   +  +LKL AVATDG
Sbjct: 120 LTAGTFSHSFRLKATDLKMLIDRTQFAISTEETRYYLNGIFVHTVESNGELKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA A+V+  +    MP II+PRK V E+ ++L + D  V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVEAPSGSEGMPGIIIPRKTVSELQKLLDNPDVVVTVEVSDAKIRLTIGSIVMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP SNDKELRV+C +  QAVDRVS +SS R +AVKL+L+  ++ +T
Sbjct: 240 SKLIDGTFPDYQRVIPASNDKELRVDCQSFSQAVDRVSTISSERGRAVKLALTDGQMTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y   P++I FN KYLL+I   ++       E VF L    S   
Sbjct: 300 VNNPDSGSATEEVPVGYESDPLEIGFNAKYLLDITAQLTGS-----EAVFLLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    D         +A YVLMPMR+
Sbjct: 355 VRDLAAD---------DALYVLMPMRV 372


>gi|221135256|ref|ZP_03561559.1| DNA polymerase III, beta subunit [Glaciecola sp. HTCC2999]
          Length = 368

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 123/387 (31%), Positives = 214/387 (55%), Gaps = 21/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITG--AIP 58
           MK T+ R   L+ L      IER++T+P+  ++LL   +G+L +  +  E+E+    ++ 
Sbjct: 1   MKFTISREQFLQPLQLVSGAIERRHTLPILSNILLVVKEGVLTLTGTDLEVELISHLSLA 60

Query: 59  ASVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
           A     G ITV A  L DI R L DG  I+F  +   GT+  I  G   + L +   S++
Sbjct: 61  ADSYEDGEITVPAKKLVDICRGLSDGNDITFQVD---GTKATIRSGRGRYTLSTLSASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ ++ +    F ++ + LK+L++ T FAMA +++RYYLNG+     +    +  VATDG
Sbjct: 118 PNLEDWQADVEFVISQNDLKHLIDSTSFAMAQQDVRYYLNGMSLETEDN--NIRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+  +    +   +  +I+PRK V EI R++ + D+SVKV +  + I +       +
Sbjct: 176 HRLALCNLAYTTETLPVRQVIIPRKGVLEINRLIEANDNSVKVKIGSNHISVKSSGFVFT 235

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +L+DG FP+++ V+P    K +  N   +++A  R SI+S+ + + V+L+LS+ +L +T
Sbjct: 236 SKLVDGRFPDHRRVLPKETTKAVTANKDVMKKAFSRASILSNEKFRGVRLNLSNGELKIT 295

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    ++I FN  YL+++++ + +     DEV F L  S++S  
Sbjct: 296 ANNPEQEEAEEIVDVNYQGEELEIGFNVAYLIDVMNALKT-----DEVKFNLSDSSASAL 350

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I      +         A YV+MPMR+
Sbjct: 351 IEDATNST---------ALYVIMPMRL 368


>gi|27375940|ref|NP_767469.1| DNA polymerase III subunit beta [Bradyrhizobium japonicum USDA 110]
 gi|27349078|dbj|BAC46094.1| DNA polymerase III beta chain [Bradyrhizobium japonicum USDA 110]
          Length = 372

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 165/387 (42%), Positives = 235/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENAKLSLKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + +    + I  G S F LQ+ PE++FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLEADGDRAV-LAIRAGRSRFTLQTLPENDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               +  +SF LA+  +K L++RT FA++TEE RYYLNGI+ H     +   L  VATDG
Sbjct: 120 LAAGDMSHSFSLAAKDVKRLIDRTQFAISTEETRYYLNGIYLHAAGTAKAATLRGVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++        MP +IVPRK VGE+ R++   ++ + + LS+++I   I ++ ++
Sbjct: 180 HRLAQLDLVQPKGADGMPGVIVPRKTVGEVQRLIEDTEAEMTIELSQAKIRFTIGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDKEL V+  +   AVDRVS +SS R +AVKLSLS  KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQGNDKELVVDKKDFENAVDRVSTISSERGRAVKLSLSPGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +    RL    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EVATLRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           ++ +D  S         A YVLMPMR+
Sbjct: 355 VQDRDDKS---------ALYVLMPMRV 372


>gi|163797311|ref|ZP_02191264.1| ApaG [alpha proteobacterium BAL199]
 gi|159177402|gb|EDP61958.1| ApaG [alpha proteobacterium BAL199]
          Length = 373

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 158/387 (40%), Positives = 240/387 (62%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKIT++R+ +L+ L H   ++ER+NTIP+  +VLL+A DG L + A+  ++++  ++  S
Sbjct: 1   MKITIDRAALLKPLAHVQSVVERRNTIPILANVLLRAADGTLSLTATDMDLDVVESVGCS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           VD  G  TV AH LY+IVRKLQDG+++      + G  + I  G SNF L + P  EFP+
Sbjct: 61  VDQPGQTTVPAHTLYEIVRKLQDGSEVELTAVGDSG-RMTIRAGRSNFSLPTLPMEEFPA 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
              +    SF L+++  K L++RT FA++TEE RYYLNGIF H  +  +   L AVATDG
Sbjct: 120 LSGDTLPTSFVLSAADAKTLIDRTRFAISTEETRYYLNGIFLHEAKAGDVAVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ +    A MP++IVPRKAV EI +++   D  V+VSLSE+++    ES  ++
Sbjct: 180 HRLARVQMPLPTGAAGMPAVIVPRKAVQEIRKLIEETDGDVQVSLSENKLRFAFESSVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDK LRV  +  ++AVDRV+ +S+ + ++VKLSL+S  L ++
Sbjct: 240 TKLIDGTFPDYERVIPTGNDKMLRVESSMFKRAVDRVATISTEKSRSVKLSLTSGTLTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            ++PD  +A E ++V Y    ++I FN +YL++I D I        + VF +  + S   
Sbjct: 300 ANSPDNAQATEEVDVDYAAAAIEIGFNSRYLMDIADQID----EGSKAVFAMADAASPTV 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  +  D            YVLMPMR+
Sbjct: 356 VTDESDDGT---------LYVLMPMRV 373


>gi|91974484|ref|YP_567143.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris BisB5]
 gi|91680940|gb|ABE37242.1| DNA polymerase III, beta subunit [Rhodopseudomonas palustris BisB5]
          Length = 372

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 170/387 (43%), Positives = 239/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L +KA+  ++E+   +PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENAQLALKATDLDLEVIETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + +    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGSTTVPAHMFYDIVRKLPDGSQIVLESDGDRSV-LAIRAGRSRFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF LA+S +K L++RT FA++TEE RYYLNGI+ H   + +   L AVATDG
Sbjct: 120 LAAGEMSHSFSLAASDVKRLIDRTQFAISTEETRYYLNGIYLHTAGSAKAATLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++   A  + MP +IVPRK VGE+ R++   D+ + + LS  +I   I ++ ++
Sbjct: 180 HRLAQVDLAQPAGASGMPGVIVPRKTVGEVQRLIEDNDAEIAIELSAGKIRFTIGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+      AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKKEFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EVAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D           NA YVLMPMR+
Sbjct: 355 IQDRD---------TKNALYVLMPMRV 372


>gi|254461783|ref|ZP_05075199.1| DNA polymerase III, beta subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206678372|gb|EDZ42859.1| DNA polymerase III, beta subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 372

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 152/387 (39%), Positives = 237/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ + HA  ++ER+NTIP+  +VL++A    +  +A+  +IE+   + A 
Sbjct: 1   MKISIERATLLKAVSHAQSVVERRNTIPILANVLIEAEGNDVRFRATDLDIEVVDKVEAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L +IVRKL DGAQ++   +   G  + I  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSATTLNEIVRKLPDGAQVTLTDDGTSG-RLTIEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   +SVL+ L +++ FA++TEE RYYLNG++ HI++      L  VATDG
Sbjct: 120 MATSEYSANFSAQASVLRRLFDKSKFAISTEETRYYLNGVYMHISDAEGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+    ++MP +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPENASEMPGVIVPRKTVGELRKLLDEDDMQIAVSVSETKVRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+  +  +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKLEVDAADFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|144900239|emb|CAM77103.1| DNA polymerase III subunit beta [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 372

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 221/387 (57%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ L H   ++ER+NTIP+  +V L+   G L + A+  +++I    PA 
Sbjct: 1   MKLTIERAQLLKSLAHVQSVVERRNTIPILSNVKLEGRPGSLSLNATDMDLDIIETAPAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ T  AH  Y+IVRKL DG+Q+    + + G  + +  G S F L   P  +FP 
Sbjct: 61  VSRPGATTAPAHTFYEIVRKLPDGSQVEIEHDADTGL-MTLRSGRSKFTLSCLPVEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               E  ++F L ++ LK LV+RT FA++TEE RYYLNGI+ H         L AVATDG
Sbjct: 120 LSGGELPFTFCLTAAELKALVDRTRFAISTEETRYYLNGIYLHAATTPGGEVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  EV +    A MP +I+PRK V E+ +++   +  V VSLSE+++        ++
Sbjct: 180 HRLARVEVTLPEGAAGMPGVIIPRKTVQEMRKLIDETEGEVTVSLSETKLRFAFADAVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDK+L V+  +  QAVDRVS +S+ + +A+KLSL    + ++
Sbjct: 240 SKLIDGTFPDYERVIPADNDKQLDVDVKSFAQAVDRVSAISTEKSRAIKLSLEKGTVTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             +P+ G A E +   Y   P++I FN +YLL+I+  +       D+  F +  + S   
Sbjct: 300 ASSPENGSATEEIEAQYESTPLEIGFNSRYLLDILGQVEG-----DKACFSMADAASPTV 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R               A YVLMPMR+
Sbjct: 355 VRD---------GVNAGAIYVLMPMRV 372


>gi|109896334|ref|YP_659589.1| DNA polymerase III, beta subunit [Pseudoalteromonas atlantica T6c]
 gi|109698615|gb|ABG38535.1| DNA polymerase III, beta subunit [Pseudoalteromonas atlantica T6c]
          Length = 367

 Score =  286 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 218/386 (56%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R + L+ L      +ER++T+P+  +VL++ +D  L +  +  E+E+   +  +
Sbjct: 1   MKFSISRENFLQPLQLVSGAVERRHTLPILSNVLIKVSDSALWLTGTDLEVELISNVTLT 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G ITV A  L DI+R L +G++ISF  +   G +  +  G S + L +   +++P
Sbjct: 61  GDFEEGEITVPAKKLLDIIRGLTEGSEISFHVD---GNKAILRCGRSKYSLSTLSANDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    FE++ + LK L++  HF+MA +++RYYLNG+     +    +  VATDGH
Sbjct: 118 NLEDWQGELEFEISQANLKRLIDSVHFSMAQQDVRYYLNGMSLETEDN--VIRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  ++          +I+PRK V EI R++   D S+KV +  + I +       + 
Sbjct: 176 RLALCRLNYTDATLPNRQVIIPRKGVMEITRLIEDSDKSLKVQVGSNHIRIFSNDFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+ A  R SI+S+ + + V+L+LSS ++ +T 
Sbjct: 236 KLVDGRFPDYRRVLPKDGDKNIIASKLGLKNAFSRASILSNEKFKGVRLNLSSGEVKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A+E ++V Y    ++I FN  YL+++++ +++     +EV F L  SNSS  I
Sbjct: 296 NNPEQEEAVEIVDVDYQGGDLEIGFNVAYLIDVLNALNA-----EEVKFTLADSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                DS         A YV+MPMR+
Sbjct: 351 EDGSDDS---------ALYVIMPMRL 367


>gi|239993751|ref|ZP_04714275.1| DNA polymerase III, beta subunit [Alteromonas macleodii ATCC 27126]
 gi|332139412|ref|YP_004425150.1| DNA polymerase III subunit beta [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327549434|gb|AEA96152.1| DNA polymerase III subunit beta [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 366

 Score =  286 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ R   L+ L      +ER++T+P+  +VL++ ++  L +  +  E+E+  ++   
Sbjct: 1   MKFTISREQFLQPLQLVSGAVERRHTLPILSNVLIKVSEDALWLTGTDLEVELISSVKLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G ITV A  L+DI+R + +G  I F  +   G++  I  G   + L +   +++P
Sbjct: 61  GEFTEGEITVPAKKLFDIIRGISEGTDIHFSLD---GSKALIRAGRGRYTLSTLSANDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ E    FEL+ S LK L++ T F+MA +++RYYLNG+     E    +  VATDGH
Sbjct: 118 NLEDWEGEVEFELSCSDLKRLIDATSFSMAQQDVRYYLNGMSLETEENI--IRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  ++    +     +I+PRK V EI R++S  D S+KV +  + + +       + 
Sbjct: 176 RLALCRLNYETALPSR-QVIIPRKGVLEISRLISEDDKSLKVQIGANHLRIFSNDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DKE+  +   L++A  R +I+S+ + + V+L+LSS +L +T 
Sbjct: 235 KLVDGRFPDYRRVLPQNGDKEIIASKAVLKEAFSRAAILSNEKFRGVRLNLSSGELKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  YL+++++ + S     D V   L  SN+S  I
Sbjct: 295 NNPEQEEAEEIVDVQYQGDDLEIGFNVAYLIDVLNALGS-----DGVKVSLSDSNASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D+         A YV+MPMR+
Sbjct: 350 EDDADDA---------ALYVIMPMRL 366


>gi|89092265|ref|ZP_01165219.1| DNA polymerase III subunit beta [Oceanospirillum sp. MED92]
 gi|89083353|gb|EAR62571.1| DNA polymerase III subunit beta [Oceanospirillum sp. MED92]
          Length = 367

 Score =  286 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 126/385 (32%), Positives = 213/385 (55%), Gaps = 20/385 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  + R  +++ L     ++ER+ T+PV  ++LL A    L +  +  E+E+ G +   
Sbjct: 1   MKFVISREALIKPLQLVAGVVERRQTLPVLSNILLVAEGDQLSMTGTDLEVELVGRVTLD 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GS+TV A  L DI + L D A+I        G ++ I  G S F L + P +EFP
Sbjct: 61  EPAEAGSVTVPARKLMDICKSLPDSARIELTLT---GQKMVIKAGRSRFTLSTLPAAEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++        +    L+NL+++T F+MA +++RYYLNG+   I     +L +V+TDGH
Sbjct: 118 NVEDSPETLELSMVQHQLRNLIDKTGFSMAQQDVRYYLNGMLLEIANG--QLRSVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA +  D+ A+      IIVPRK + E+ R+L + +  +++ +  S I  ++   + + 
Sbjct: 176 RLATSVTDVEAEDGMQHQIIVPRKGILELARLLQNGEEELRLVIGASHIRAHVGDFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ VIP + DK L  +   LRQ + R++I+S+ + + V+LSLSS  L +  
Sbjct: 236 KLVDGKFPDYERVIPKNGDKILLSDRMELRQVLSRIAILSNEKYRGVRLSLSSGYLQVMA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E++ V Y    +++ FN  YLL+ +  ++SD      V   L  SNSS  +
Sbjct: 296 NNPEQEEAEETLAVDYEGETLEVGFNVNYLLDCLSILNSDV-----VRLTLSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMR 384
            G D++          + YV+MPMR
Sbjct: 351 EGFDEE---------GSVYVVMPMR 366


>gi|23014790|ref|ZP_00054590.1| COG0592: DNA polymerase sliding clamp subunit (PCNA homolog)
           [Magnetospirillum magnetotacticum MS-1]
          Length = 372

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 226/387 (58%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ L H   ++ER+ TIP+  +V L+   GLL + A+  +++I  A+PA 
Sbjct: 1   MKLTIERAALLKSLAHVQSVVERRTTIPILSNVKLEGRGGLLSLNATDMDLDIIEAVPAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ T  AH  Y+IVRKL DG+Q+    + E G ++ +  G S F L   P  +FP 
Sbjct: 61  VVRPGATTAPAHTFYEIVRKLPDGSQVEIEFDAESG-QLTLRSGRSKFSLACLPVEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               +  +SF L+++ LK L++RT FA++TEE RYYLNGI+ H   ++    L AVATDG
Sbjct: 120 LSGGDLPFSFTLSAAELKTLIDRTRFAISTEETRYYLNGIYLHAAASDGIDVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+ + +  A MP +IVPRK V EI +++   D  + VSLSE+++        ++
Sbjct: 180 HRLARVEITLPSGAAGMPGVIVPRKTVAEIRKLIDETDGEITVSLSETKLKFAFGDAVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDK L V+C +  QAVDRVS +S+ + +A+KL+L      ++
Sbjct: 240 SKLIDGTFPDYERVIPADNDKVLVVDCKSFAQAVDRVSAISTEKSRAIKLALEKGSATLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             + + G A+E +   Y   P++I FN +YL++I+  +       +   F +  + S   
Sbjct: 300 ASSAENGSAVEEIEADYTSTPLEIGFNSRYLMDILAQVEG-----ETARFAMADAASPTV 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R               A YVLMPMR+
Sbjct: 355 VREMTDG---------GAIYVLMPMRV 372


>gi|77917620|ref|YP_355435.1| DNA polymerase III subunit beta [Pelobacter carbinolicus DSM 2380]
 gi|77543703|gb|ABA87265.1| DNA polymerase III, beta subunit [Pelobacter carbinolicus DSM 2380]
          Length = 372

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 118/389 (30%), Positives = 201/389 (51%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  ++E+   L+ L     I+E+KNTIP+  +VL++A D  + + A+  E+ +  + PAS
Sbjct: 1   MNFSIEKEVFLKGLARVQGIVEKKNTIPILANVLIEAEDDHIRLTATDLEVGMKASYPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G ITVSA  L++I+++L +       KE      + I  G S F +      EFP 
Sbjct: 61  VTSAGRITVSAKKLFEIIKELPEKEISFTAKE---NCWIEIRCGKSLFNVVGLSADEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEE--DLKLCAVATDG 178
             + +    F++   +LK L+E+T F+M+T+E +Y LNGI+    E+     L  VATDG
Sbjct: 118 FPQIDKEQFFQIPGDILKRLIEKTAFSMSTDESKYNLNGIYLRAMEDEGRQILRFVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPS--IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRLA+ +  +     +  +  +I PRK V E+ +I    +  V +   ++   +      
Sbjct: 178 HRLALMQTPLDCSHVEPLAKGVIFPRKGVLELRKIAEEGNGEVLLGFMDNNAVIKKSQTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RL+DG+FP+Y  VIP +ND +  +       A+ R++I+SS + + VK+    ++L 
Sbjct: 238 IVMRLVDGDFPDYNRVIPLNNDLKANIPREEFLHALRRMAILSSEKSKGVKIDFQENQLT 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP+ G A E   + Y E  + I FN +YL++I+ N+ S     ++V   L    S 
Sbjct: 298 LSSSNPEFGDAREDFEIEYAEGDLSIGFNARYLIDILANLDS-----EKVCLSLRDQLSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             I   D +         +   V+MPMR+
Sbjct: 353 GLITPLDDN---------DYLAVIMPMRL 372


>gi|83309736|ref|YP_420000.1| DNA polymerase III subunit beta [Magnetospirillum magneticum AMB-1]
 gi|82944577|dbj|BAE49441.1| DNA polymerase sliding clamp subunit [Magnetospirillum magneticum
           AMB-1]
          Length = 379

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 226/387 (58%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ L H   ++ER+ TIP+  +V L+   GLL + A+  +++I  A+PA 
Sbjct: 8   MKLTIERAALLKSLAHVQSVVERRTTIPILSNVKLEGRGGLLSLNATDMDLDIIEAVPAD 67

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ T  AH  Y+IVRKL DG+Q+    + E G ++ +  G S F L   P  +FP 
Sbjct: 68  VVRPGATTAPAHTFYEIVRKLPDGSQVEIEHDAESG-QLTLRSGRSKFSLACLPVEDFPV 126

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  ++F L+++ LK L++RT FA++TEE RYYLNGI+ H   ++    L AVATDG
Sbjct: 127 LSGGELPFTFSLSAAELKTLIDRTRFAISTEETRYYLNGIYLHAAASDGVDVLRAVATDG 186

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+ + +  A MP IIVPRK V EI +++   D  + VSLSE+++        ++
Sbjct: 187 HRLARVEITLPSGAAGMPGIIVPRKTVAEIRKLIDETDGEITVSLSETKLKFAFGDAVLT 246

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDK L V+C +  QAVDRVS +S+ + +A+KL+L      ++
Sbjct: 247 SKLIDGTFPDYERVIPADNDKVLVVDCKSFAQAVDRVSAISTEKSRAIKLALEKGSATLS 306

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             + + G A+E +   Y   P++I FN +YL++I+  +       D   F +  + S   
Sbjct: 307 ASSAENGSAVEEIEADYTSTPLEIGFNSRYLMDILAQVEG-----DTARFAMADAASPTV 361

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R               A YVLMPMR+
Sbjct: 362 VREMTDG---------GAIYVLMPMRV 379


>gi|260428831|ref|ZP_05782808.1| DNA polymerase III, beta subunit [Citreicella sp. SE45]
 gi|260419454|gb|EEX12707.1| DNA polymerase III, beta subunit [Citreicella sp. SE45]
          Length = 372

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 234/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKVSIERATLLKAVSQAQSVVERRNTIPILANVLIEAEGNTVTFRATDLDIEVLDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGA +   ++   G  + ++ G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVTLHEIVRKLPDGALVQLSEDGGAG-RLTVTAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ HI  +EE   L  VATDG
Sbjct: 120 MASSEYATNFTAKAEVLRKLFDKSKFAISTEETRYYLNGVYMHIADSEEGRVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  + +    MP +IVPRK VGE+ ++L   +  + VS+SE+++      ++++
Sbjct: 180 HRLARIDAPLPSGAEAMPGVIVPRKTVGELRKLLDEDEMDIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPTGNTRRLEVDASEFAKAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y + P++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDDPLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + +  +A YV+MPMR+
Sbjct: 355 MR---------EGSDTSAVYVVMPMRV 372


>gi|298290590|ref|YP_003692529.1| DNA polymerase III subunit beta [Starkeya novella DSM 506]
 gi|296927101|gb|ADH87910.1| DNA polymerase III, beta subunit [Starkeya novella DSM 506]
          Length = 371

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 163/386 (42%), Positives = 231/386 (59%), Gaps = 16/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+++L+ L H  R++ER+NTIP+  +VL++ +   L ++A+  +IEI   I A 
Sbjct: 1   MKVTVERAELLKSLAHVHRVVERRNTIPILANVLMRTDARGLALRATDLDIEIVETIAAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH +YDIVRKL +GAQ+      + G  + +  G S F LQ+ PE+EFP 
Sbjct: 61  VGQEGATTVPAHTIYDIVRKLPEGAQVQIETSGDRG-TLTVRAGRSRFALQTLPETEFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI-NEEDLKLCAVATDGH 179
               E  + F L +  LK LV++T FA++TEE RYYLNGI+ H+ +     L AVATDGH
Sbjct: 120 LAAGEMTHRFTLPAGELKRLVDKTQFAISTEETRYYLNGIYLHVADASGPVLRAVATDGH 179

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA A+    A    MP +IVPRKAV EI R+    ++ V V LS ++I ++++ + ++ 
Sbjct: 180 RLAQAQTTAPAGATGMPGVIVPRKAVAEIQRLAEDAEAEVTVELSTAKIRVSLDRVVLTS 239

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y  VIP  NDK L V+  +   AVDRVS ++S R +AVKLS+   KL ++V
Sbjct: 240 KLIDGTFPDYGRVIPLGNDKTLVVDKADFASAVDRVSTVASERGRAVKLSIGDGKLTLSV 299

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NPD G A E + V Y   P+DI FN +YLL+I   I            +L    S   +
Sbjct: 300 TNPDSGSATEEIEVEYAAEPIDIGFNSRYLLDITSQIEG-----GTAELKLADPGSPTLV 354

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  +         K  A YVLMPMR+
Sbjct: 355 QDPE---------KRGALYVLMPMRV 371


>gi|56551876|ref|YP_162715.1| DNA polymerase III subunit beta [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761806|ref|ZP_04759892.1| DNA polymerase III, beta subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|56543450|gb|AAV89604.1| DNA polymerase III, beta subunit [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241373720|gb|EER63280.1| DNA polymerase III, beta subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 369

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 147/386 (38%), Positives = 234/386 (60%), Gaps = 18/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQA-NDGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ L H   ++ER+NTIP+  +VL++A ++G +++ A+  ++++   + A
Sbjct: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEAASNGCVKLMATDLDLQVVETLSA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  G  TVSAH+L++IVRKL DG+QI          ++ I  G S F L + P  +FP
Sbjct: 61  EVDTPGETTVSAHMLFEIVRKLPDGSQIQLSA---ADGKMLIVAGRSRFSLATLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
              E E    F L +  LK ++++T FA++ +E RYYLNGIF H+ +++  + A ATDGH
Sbjct: 118 VISESELPTHFALPTESLKQIIDKTRFAISVDETRYYLNGIFLHVLKDENVMKAAATDGH 177

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA   +   A    MP +I+PRK V E+ ++L   +  +K+SLS S+I  ++    ++ 
Sbjct: 178 RLACVTIPAPAGAEDMPDVIIPRKCVVELRKLLDECEDEIKISLSASKICFDLGHAILTS 237

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y  VIP +NDK L+V   +L Q VDRV+ ++S + +AVK+S+ + K+ ++V
Sbjct: 238 KLIDGTFPDYSRVIPTANDKLLKVKPKDLMQGVDRVATIASEKTRAVKMSIEAGKISLSV 297

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            +P+ G A E +   Y+  P+DI FN +YLL+I+  I S     D+    L  + +   I
Sbjct: 298 TSPENGMATEEVLGEYDADPLDIGFNARYLLDILGQIES-----DQAEIHLAEAAAPTLI 352

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           R  D+ +         A YVLMPMR+
Sbjct: 353 RDSDQSA---------ALYVLMPMRV 369


>gi|192362292|ref|YP_001980526.1| DNA polymerase III subunit beta [Cellvibrio japonicus Ueda107]
 gi|190688457|gb|ACE86135.1| DNA polymerase III, beta subunit [Cellvibrio japonicus Ueda107]
          Length = 367

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 205/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V R  +L+ L     ++ER+ T+PV  +VL+Q     L +  +  E+EI G +   
Sbjct: 1   MKFAVSREALLKPLQLVAGVVERRQTLPVLSNVLIQLEGDQLSLTGTDLEVEIIGRLTLE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI R L DG+ I FF E      + +  G S F L + P S+FP
Sbjct: 61  QAGQSGEITVPARKLVDICRSLPDGSTIEFFLEEN---RILVKSGRSRFTLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++      F  A + +K L+ERT FAMA +++RYYLNG+ + + ++   L  VATDGH
Sbjct: 118 NVEDAPGNLRFSCAQAEVKRLIERTAFAMAQQDVRYYLNGMLWEVRQDH--LRVVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+A+    I      +   I+PRK V E+ R+L    + V+V LS + I +     + + 
Sbjct: 176 RMAMCTRAIAVNTDDVVQAILPRKGVLELSRLLDDSSAQVEVVLSANHIRVTSVDYTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP Y+ V+P   +K +  +   L+QA  R +I+S+ + + V+L LS+  L +  
Sbjct: 236 KLVDGKFPEYERVLPRGGNKVVIGSRLELKQAFARTAILSNEKYRGVRLLLSNGVLTIVA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  YL ++ + IS     ++ +   L  +NSS  +
Sbjct: 296 NNPEQEEAEEQVTVDYTGESLEIGFNVSYLQDVANVIS-----NENIKITLLDANSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           ++ YV+MPMR+
Sbjct: 351 EEPEN---------SDSLYVVMPMRL 367


>gi|149375635|ref|ZP_01893404.1| DNA polymerase III, beta subunit [Marinobacter algicola DG893]
 gi|149360037|gb|EDM48492.1| DNA polymerase III, beta subunit [Marinobacter algicola DG893]
          Length = 371

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAI-PA 59
           MK+T+ R  +L  L     ++ERK T+PV  +VLL A D  L +  +  E+E+ G + P 
Sbjct: 5   MKLTISRESLLTPLQSIAGVVERKQTMPVLSNVLLVAEDNTLTLTGTNMEVELVGRVSPV 64

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  G ITV A  L DI R L D A I    E   G  +++  G S+F L + P   FP
Sbjct: 65  HVDQPGRITVPARKLSDICRALGDEAPIELALE---GDRLHLRCGASHFTLSTLPAEHFP 121

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +++   +  EL    L  + + T FAMA +++RYYLNG+   ++++   +  VATDGH
Sbjct: 122 NVEDDAESFGLELPQKELSRMFDATAFAMAQQDVRYYLNGLLLEVDKDH--VRTVATDGH 179

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A  D+     +   +IVPRK V E+ R+L   ++ V + + ++ +   + S + + 
Sbjct: 180 RLAMAHFDLPTGCPEPRQVIVPRKGVLELARLLDDVETPVTLVIGDNHLRATVGSYTFTS 239

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LI+G+FP+Y  VIP   DK +  +   L+  + R  I+S   I+ V+L+L+ ++L +  
Sbjct: 240 KLIEGKFPDYNRVIPRGGDKVVLADRATLKNTLQRAGILSHENIRGVRLNLAPNELQVFA 299

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NPD  +A +++ V Y    + I FN  YL+++++ +      +D+V   L + NSS  I
Sbjct: 300 NNPDQEQAEDALPVEYQGESLQIGFNVGYLVDVMNALD-----EDQVKITLANPNSSALI 354

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
             ++ +            YV+MPMR+
Sbjct: 355 EAENDN---------RCLYVVMPMRL 371


>gi|319407987|emb|CBI81641.1| DNA polymerase III, beta chain [Bartonella schoenbuchensis R1]
          Length = 373

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 161/387 (41%), Positives = 249/387 (64%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M IT++R+  L+ L    R++ER+NTIP+  +VL+ A+   +++KA+  ++E+  +  A 
Sbjct: 1   MHITIDRNQFLKSLNRVHRVVERRNTIPILSNVLINASGDGVQLKATDLDLEVIESSLAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ITV AHLLYDIVRKL  G++I    +N     +++  G +NF LQ  P+ +FP 
Sbjct: 61  VEQEGAITVPAHLLYDIVRKLSSGSEIVLKVDNNQANTMSVVSGCANFQLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++   F L++S LK L + T FA++TEE RYYLNGI+FH +++  LKL  VATDGH
Sbjct: 121 SLPGQFSCCFSLSASDLKRLFDCTQFAISTEETRYYLNGIYFHVVDDGVLKLRLVATDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  ++I  MP +I+PRKAVGE+ ++LS + +  V + LSE++I  ++ S+ ++
Sbjct: 181 RLAQVDMEAPSEIKDMPGVIIPRKAVGELQKLLSEETEGDVSIELSETKIRFSVGSVVLT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP +NDK+L VN  +   AVDRVS +SS R +AVKL++ + +L + 
Sbjct: 241 SKLIDGTFPEYQRVIPLNNDKKLAVNRQDFSAAVDRVSTISSDRGRAVKLTIENGQLKLV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y   P++I FN +YLL+I   ++S     DE+VF L  + +   
Sbjct: 301 VNNPDSGSAEDQLVADYTSDPLEIGFNSRYLLDIAAQLTS-----DEMVFMLADAGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D  +         A YVLMP+R+
Sbjct: 356 IRESDDAA---------ALYVLMPIRV 373


>gi|84501259|ref|ZP_00999464.1| DNA polymerase III subunit beta [Oceanicola batsensis HTCC2597]
 gi|84390550|gb|EAQ03038.1| DNA polymerase III subunit beta [Oceanicola batsensis HTCC2597]
          Length = 372

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 145/387 (37%), Positives = 237/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKFSIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGNEVQFRATDLDIEVVDKAPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGAQ++  ++   G  + ++ G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVTLHEIVRKLPDGAQVTLSEDGAAG-RLTVAAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+   E+   L  VATDG
Sbjct: 120 MASSEYQSNFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVAEGEDGRMLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +    A MP +IVPRK VGE+ ++L   +  V VS+SE+++      ++++
Sbjct: 180 HRLARIDATLPEGAADMPGVIVPRKTVGELRKLLDDDELQVAVSVSETKVRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N +++ V+ ++  +AVDRV+ +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKMEVDASDFAKAVDRVATVSSERSRAVKLALDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +S+     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSAGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + +  +A YV+MPMR+
Sbjct: 355 MR---------EGSDTSAVYVVMPMRV 372


>gi|163745036|ref|ZP_02152396.1| DNA polymerase III subunit beta [Oceanibulbus indolifex HEL-45]
 gi|161381854|gb|EDQ06263.1| DNA polymerase III subunit beta [Oceanibulbus indolifex HEL-45]
          Length = 372

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+   + A 
Sbjct: 1   MKFSIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDVSFRATDLDIEVVDKVAAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA LL++IVRKL DGA I+   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVSATLLHEIVRKLPDGALINLTADTAAG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ HI +      L  VATDG
Sbjct: 120 MASSEYASNFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYLHIADAESGKALRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + ++    A+MP +IVPRK VGE+ ++L   +  + VS+SE++I      ++++
Sbjct: 180 HRLARIDAEMPEGAAEMPGVIVPRKTVGELRKLLDDDEMEIAVSVSETKIRFATPGITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N +++ V+  +  +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKMEVDAADFARAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYADERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|114762141|ref|ZP_01441609.1| DNA polymerase III subunit beta [Pelagibaca bermudensis HTCC2601]
 gi|114545165|gb|EAU48168.1| DNA polymerase III subunit beta [Roseovarius sp. HTCC2601]
          Length = 372

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKVSIERATLLKAVSQAQSVVERRNTIPILANVLIEAEGDTVTFRATDLDIEVLDRAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGA +    ++  G  + ++ G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVTLHEIVRKLPDGALVQLADDSAAG-RLTVTAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   +  L+ L +++ FA++TEE RYYLNG++ H+++  E   L  VATDG
Sbjct: 120 MASSEYATNFSAKAETLRKLFDKSKFAISTEETRYYLNGVYMHVSDSEEGRVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      MP +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDAPVPEGAEAMPGVIVPRKTVGELRKLLDDDDMDIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+ T   +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPTGNTRRLEVDATEFAKAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y + P++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDEPLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + +  +A YV+MPMR+
Sbjct: 355 MR---------EGSDTSAVYVVMPMRV 372


>gi|85705684|ref|ZP_01036781.1| DNA polymerase III subunit beta [Roseovarius sp. 217]
 gi|85669674|gb|EAQ24538.1| DNA polymerase III subunit beta [Roseovarius sp. 217]
          Length = 372

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER  +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKLSIERGALLKAVSQAQSVVERRNTIPILANVLIEAEGNSVQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DG+ ++   +   G  + +  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPDGSLVTLSDDGTSG-RLTVQAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H++  +    L  VATDG
Sbjct: 120 MASSEYASNFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYLHVSDADGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+    + MP +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDADLPDGASDMPGVIVPRKTVGELRKLLEDDDMKIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + + V+     QAVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRRMEVDAAEFAQAVDRVATVSSERSRAVKLSLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N   A YV+MPMR+
Sbjct: 355 MR---------EGNDTTAVYVVMPMRV 372


>gi|92115635|ref|YP_575364.1| DNA polymerase III subunit beta [Nitrobacter hamburgensis X14]
 gi|91798529|gb|ABE60904.1| DNA polymerase III, beta subunit [Nitrobacter hamburgensis X14]
          Length = 372

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 165/387 (42%), Positives = 240/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  + A 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENARLSLKATDLDLEVTETLAAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G+ TV AH+ YDIVRKL DGAQI    + +    + I  G S F LQ+ PE++FP 
Sbjct: 61  TATGGATTVPAHIFYDIVRKLPDGAQIVLEGDGDRSV-LAIRAGRSRFTLQTLPENDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF+LA++ +K L++RT FA++TEE RYYLNGI+ H   + ++  L  VATDG
Sbjct: 120 LAAGEMTHSFKLAAADIKRLIDRTQFAISTEETRYYLNGIYLHSAGSAKNATLRGVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ +      MP +I+PRK VGE+ R++   ++ V + LS+ +I   I ++ ++
Sbjct: 180 HRLAQVDLALPNGAEGMPGVIIPRKTVGEVQRLIEDNEAEVGIELSQGKIRFTIGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELIVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y   P+DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASEPLDIGFNSRYLLDIAAQIEG-----EGAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  KD            A YVLMPMR+
Sbjct: 355 VHDKD---------SKGALYVLMPMRV 372


>gi|84684520|ref|ZP_01012421.1| DNA polymerase III subunit beta [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667499|gb|EAQ13968.1| DNA polymerase III subunit beta [Rhodobacterales bacterium
           HTCC2654]
          Length = 372

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 151/387 (39%), Positives = 234/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI+VER+ +L+ +G A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISVERAVLLKAVGQAQSVVERRNTIPILANVLIEAEGSTVSFRATDLDIEVVDKAPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGA +    +   G  + +  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVTLHEIVRKLPDGAMVQLTDDGAAG-RLTVEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+++      L  VATDG
Sbjct: 120 MASSEYSANFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVSDAEGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+      MP +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPKGAEDMPGVIVPRKTVGELRKLLDDDDMQIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N K++ V+     +AVDRV+ +SS R +AVKL+L+ DKL ++
Sbjct: 240 SKVIDGTFPDYTRVIPMGNTKKMEVDAAEFAKAVDRVATVSSERSRAVKLALAEDKLTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  M+I FN KYLLEI   +       +  VF  D++   V 
Sbjct: 300 VNAPDAGAAEEELIVAYGDEGMEIGFNAKYLLEIASQVD-----RENAVFMFDNAGQPVL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|254784275|ref|YP_003071703.1| DNA polymerase III subunit beta [Teredinibacter turnerae T7901]
 gi|237687276|gb|ACR14540.1| DNA polymerase III, beta subunit [Teredinibacter turnerae T7901]
          Length = 367

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 207/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TV R  +++ L     ++ER+ T+ V  +VL++     L +  +  E+EI G +   
Sbjct: 1   MKFTVSREALIKPLQLVAGVVERRQTMAVLANVLMEIEGDQLSLTGTDLEVEIIGRVQLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A    DI R L D + I F  +++   +  +  G S F L + P +EFP
Sbjct: 61  SAPGNGEITVPAKKFLDICRSLPDKSVIEFSLQDQ---KATVKSGKSRFTLSTLPANEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++     +       +K L++RT FAMA +++RYYLNG+ + +     ++  VATDGH
Sbjct: 118 AVEQGSNDINISCEQKEIKRLIDRTAFAMAQQDVRYYLNGMLWELRPG--EIRVVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV    +   ++++   I+PRK V E+ R+L+  +  V+VSL  S +  +    + + 
Sbjct: 176 RLAVCSRPVDVDVSEIKQAILPRKGVIELARLLNDSEDGVEVSLGSSHMRASTAEYTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  N ++L+QA  R SI+S+ + + V+L L +  L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKVVLGNRSDLKQAFARTSILSNEKYRGVRLELVAGSLTIIA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A + + V YN   +++ FN  YL ++ + + S     + +   L  SNSS  +
Sbjct: 296 NNPEQEEAQDQVEVDYNGDALEVGFNVSYLQDVANVLDS-----ENIKITLSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           ++ YV+MPMR+
Sbjct: 351 EEPEN---------SDSSYVVMPMRL 367


>gi|49474937|ref|YP_032978.1| DNA polymerase III subunit beta [Bartonella henselae str.
           Houston-1]
 gi|49237742|emb|CAF26934.1| DNA polymerase III, beta chain [Bartonella henselae str. Houston-1]
          Length = 373

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 252/387 (65%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ITV+R+ +L+ LG   R++ER+NT+P+  +VL+ A+   +++KA+  ++E+T +  A+
Sbjct: 1   MRITVDRNQLLKSLGRVHRVVERRNTVPILSNVLIDADKNGVQLKATDLDLEVTESFVAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G+ITV AHLLYDIVRKL DG++I    +    + +++  G +NF LQ  P+ +FP 
Sbjct: 61  IKQEGAITVPAHLLYDIVRKLPDGSEIVLSVDMNQASTMSVVSGCANFQLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++ Y F L++S LK+L++ T FA++TEE RYYLNGI+FH I++  LKL  VATDGH
Sbjct: 121 SLPGQFGYRFSLSTSGLKHLLDCTQFAISTEETRYYLNGIYFHVIDDGVLKLRLVATDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  + +  MP +IVPRK VGE+ ++LS + D  V V LSE++I  +I S+  +
Sbjct: 181 RLAQVDMEAPSGVEGMPGVIVPRKTVGELQKLLSEEVDEDVCVELSETKIRFSIGSVVFT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L VN  +   AVDRVS +SS R +AVKL++   +L + 
Sbjct: 241 SKLIDGTFPEYQRVIPLGNDKKLIVNRQDFSSAVDRVSTISSDRGRAVKLTIEQGQLKLI 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A + + V Y   P++I FN +YLL+I   +SS     DE+VF L  + +   
Sbjct: 301 VHNPDSGSAEDQLAVTYTSDPLEIGFNSRYLLDIAGQLSS-----DEMVFMLAEAGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR          +   +A YVLMP+R+
Sbjct: 356 IR---------NNGVADALYVLMPIRV 373


>gi|149202936|ref|ZP_01879907.1| DNA polymerase III subunit beta [Roseovarius sp. TM1035]
 gi|149143482|gb|EDM31518.1| DNA polymerase III subunit beta [Roseovarius sp. TM1035]
          Length = 372

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER  +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKLSIERGALLKAVSQAQSVVERRNTIPILANVLIEAEGNSVQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DG+ ++   +   G  + +  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPDGSLVTLSDDGASG-RLTVQAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H++  +    L  VATDG
Sbjct: 120 MASSEYASNFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYLHVSDADGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+    + MP +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDADLPDGASDMPGVIVPRKTVGELRKLLEDDDMKIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + + V+     QAVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRRMEVDAAEFAQAVDRVATVSSERSRAVKLSLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N   A YV+MPMR+
Sbjct: 355 MR---------EGNDTTAVYVVMPMRV 372


>gi|260752565|ref|YP_003225458.1| DNA polymerase III subunit beta [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258551928|gb|ACV74874.1| DNA polymerase III, beta subunit [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 369

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 146/386 (37%), Positives = 233/386 (60%), Gaps = 18/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQA-NDGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ L H   ++ER+NTIP+  +VL++A ++G +++ A+  ++++   + A
Sbjct: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEAASNGCVKLMATDLDLQVVETLSA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  G  TVSAH+L++IVRKL DG+QI          ++ I  G S F L + P  +FP
Sbjct: 61  EVDTPGETTVSAHMLFEIVRKLPDGSQIQLSA---ADGKMLIVAGRSRFSLATLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
              E E    F L +  LK ++++T FA++ +E RYYLNGIF H+ +++  + A ATDGH
Sbjct: 118 VISESELPTHFALPTESLKQIIDKTRFAISVDETRYYLNGIFLHVLKDENVMKAAATDGH 177

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA   +        MP +I+PRK V E+ ++L   +  +K+SLS S+I  ++    ++ 
Sbjct: 178 RLACVTIPAPVGAEDMPDVIIPRKCVVELRKLLDECEDEIKISLSASKICFDLGHAILTS 237

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y  VIP +NDK L+V   +L Q VDRV+ ++S + +AVK+S+ + K+ ++V
Sbjct: 238 KLIDGTFPDYSRVIPTANDKLLKVKPKDLMQGVDRVATIASEKTRAVKMSIEAGKISLSV 297

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            +P+ G A E +   Y+  P+DI FN +YLL+I+  I S     D+    L  + +   I
Sbjct: 298 TSPENGMATEEVLGEYDADPLDIGFNARYLLDILGQIES-----DQAEIHLAEAAAPTLI 352

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           R  D+ +         A YVLMPMR+
Sbjct: 353 RDSDQSA---------ALYVLMPMRV 369


>gi|119385559|ref|YP_916614.1| DNA polymerase III subunit beta [Paracoccus denitrificans PD1222]
 gi|119376154|gb|ABL70918.1| DNA polymerase III, beta subunit [Paracoccus denitrificans PD1222]
          Length = 372

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 145/387 (37%), Positives = 229/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+D+++ +  A  ++ER+NTIP+  +VL++A    +  +A+  + EI    PA 
Sbjct: 1   MKFSIERADLVKAVSQAQSVVERRNTIPILANVLIEAAPEGVSFRATDLDTEIVDRAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L DI RKL DGA +    +   G  +++  G SNF L + P  +FP 
Sbjct: 61  VERPGATTVSAGMLNDIARKLPDGALVQLSLDAASG-RLSVQAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               EY  +F   ++VL+ L +++ FA++ EE RYYLNG++ H    E+   L  VATDG
Sbjct: 120 MSSSEYGANFSAPAAVLRRLFDKSKFAISNEETRYYLNGVYMHVAQTEDGPGLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  + A    MP +IVPRK V E+ ++L   ++ + VS+SE+++     +++++
Sbjct: 180 HRLARIDAPLPAGAEDMPGVIVPRKTVAELRKLLDDDEAEIAVSVSETKVRFATPTITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+  +  +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPSGNARKLEVDAGDFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y + P++I FN KYL EI   I       +  VF  + S  +  
Sbjct: 300 VNAPDAGAADEELPVAYADEPLEIGFNAKYLHEIASQIE-----RENAVFLFNGSGDAAL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR         +    +A YV+MPMR+
Sbjct: 355 IR---------EGGDTSAVYVVMPMRV 372


>gi|110677617|ref|YP_680624.1| DNA polymerase III subunit beta [Roseobacter denitrificans OCh 114]
 gi|109453733|gb|ABG29938.1| DNA polymerase III, beta subunit [Roseobacter denitrificans OCh
           114]
          Length = 372

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 237/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDVTFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGA ++   ++ +G  + +  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSATTLHEIVRKLPDGALVTLTADSAIG-RLTVEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               EY  +F + + VL+ L +++ FA++TEE RYYLNG++ H+   +    L  VATDG
Sbjct: 120 MATSEYQSNFSVKAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADADGGHVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+      MP +IVPRK VGE+ ++L + + ++ VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPEAANDMPGVIVPRKTVGELRKLLDNDEMTIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+  +  +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKLEVDAADFARAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDLSAVYVVMPMRV 372


>gi|328541626|ref|YP_004301735.1| DNA polymerase III, beta subunit [polymorphum gilvum SL003B-26A1]
 gi|326411378|gb|ADZ68441.1| DNA polymerase III, beta subunit [Polymorphum gilvum SL003B-26A1]
          Length = 372

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 163/387 (42%), Positives = 242/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ER+D+L+ L H  R++ER+NTIP+  +VLL+A  G L++KA+  ++E+   +PA 
Sbjct: 1   MKATLERTDLLKSLTHVHRVVERRNTIPILSNVLLRAEHGALKLKATDLDLEVLETVPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G  TV AH++YDIVRKL +G+Q+      +    + I  G S F LQ  PE++FP 
Sbjct: 61  IEAPGGTTVPAHMIYDIVRKLPEGSQVVLETTGD-NATLEIRAGRSRFALQMLPEADFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + + F L++  ++ L++ T FA++TEE RYYLNGI+ H     +  K  AVATDG
Sbjct: 120 LTAGTFSHQFTLSAGAIRKLIDTTQFAISTEETRYYLNGIYLHTVDTPQGQKFRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AEV   A  A MP IIVPRK VGEI ++L  +++ V+V +S+++I +    + ++
Sbjct: 180 HRLAQAEVPAPAGAAGMPGIIVPRKTVGEIQKLLEDREAEVQVEISDTKIRVTTGPVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDKELRV+    R+AVDRVS +SS R +AVKL+LS  +L + 
Sbjct: 240 SKLIDGTFPDYGRVIPQHNDKELRVDRDEFREAVDRVSTISSERGRAVKLALSEGRLVLA 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E + V Y+  P++I FN +YLL+I   ++      D  +FRL    S   
Sbjct: 300 VNNPDSGSATEELAVEYDSDPLEIGFNSRYLLDIAAQLTG-----DTALFRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           ++          +   +  +VLMPMR+
Sbjct: 355 VQD---------NAAEDCLFVLMPMRV 372


>gi|126734081|ref|ZP_01749828.1| DNA polymerase III subunit beta [Roseobacter sp. CCS2]
 gi|126716947|gb|EBA13811.1| DNA polymerase III subunit beta [Roseobacter sp. CCS2]
          Length = 372

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+     A 
Sbjct: 1   MKFSIERAVLLKAVAQAQSVVERRNTIPILANVLIEAEGDSVQFRATDLDIEVVDRASAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L +IVRKL DGA ++  ++   G  + I  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVAAVTLNEIVRKLPDGALVTLTEDGASG-RLTIEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+  ++    L  VATDG
Sbjct: 120 MASSEYAANFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVSDSDGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+    A M  +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDADLPDGAADMAGVIVPRKTVGELRKLLDDDDMQIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+ +   +AVDRV+ +SS R +AVKL+L  DKL ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  ++S     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNTSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|89069838|ref|ZP_01157173.1| DNA polymerase III subunit beta [Oceanicola granulosus HTCC2516]
 gi|89044639|gb|EAR50755.1| DNA polymerase III subunit beta [Oceanicola granulosus HTCC2516]
          Length = 372

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 149/387 (38%), Positives = 230/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER  +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKFSIERGALLKAVAQAQSVVERRNTIPILANVLIEAEGDGVQFRATDLDIEVVDRAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L +IVRKL DGA ++  ++   G  + I  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAAVTLNEIVRKLPDGALVTLAEDGGSG-RLQIMAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+   E+   L  VATDG
Sbjct: 120 MASSEYATNFTADAPVLRRLFDKSKFAISTEETRYYLNGVYMHVAEGEDGRALRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +     +MP +IVPRK VGE+ ++L   +  + VS+SE++I      ++++
Sbjct: 180 HRLARIDAALPEGAEEMPGVIVPRKTVGELRKLLDDDEMQIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N K L V+ +   +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPANNAKRLEVDASEFAKAVDRVATVSSERSRAVKLSLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  +DI FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGNAEEELAVAYGDEKLDIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R  D           +A YV+MPMR+
Sbjct: 355 MREGDD---------TSAVYVVMPMRV 372


>gi|75674201|ref|YP_316622.1| DNA polymerase III subunit beta [Nitrobacter winogradskyi Nb-255]
 gi|74419071|gb|ABA03270.1| DNA polymerase III, beta subunit [Nitrobacter winogradskyi Nb-255]
          Length = 372

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 162/387 (41%), Positives = 236/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  + A 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENAKLSLKATDLDLEVTETLAAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDI+RKL DGAQI    + +    + I  G S F LQ+ PE++FP 
Sbjct: 61  TGTVGSTTVPAHMFYDIIRKLPDGAQIVLEGDGDRSV-LTIRAGRSRFTLQTLPENDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               E  +SF LA++ LK L++RT FA++TEE RYYLNGI+ H      +  L  VATDG
Sbjct: 120 LAAGEMTHSFTLAAADLKRLIDRTQFAISTEETRYYLNGIYLHGAGTANNATLRGVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ +      MP +I+PRK VGE+ R++   ++ + + LS+ +I   + ++ ++
Sbjct: 180 HRLAQLDLALPKGAEGMPGVIIPRKTVGEVQRLIEDSEAEIGIELSQGKIRFTLGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EAAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  +D            A YVLMPMR+
Sbjct: 355 VHDRD---------SRGALYVLMPMRV 372


>gi|332991510|gb|AEF01565.1| DNA polymerase III subunit beta [Alteromonas sp. SN2]
          Length = 366

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R   L+ L      +ER++T+P+  +VL++ ++  L +  +  E+E+  ++   
Sbjct: 1   MKFSISREQFLQPLQLVSGAVERRHTLPILSNVLIKVSEDALWLTGTDLEVELISSVKLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G ITV A  L+DI+R + +G  I F  +   G +  I  G   + L +   +++P
Sbjct: 61  GEFTEGEITVPAKKLFDIIRGISEGTDIHFSID---GNKALIKAGRGRYTLSTLSANDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ E    FE+  S +K L++ T F+MA +++RYYLNG+     E    +  VATDGH
Sbjct: 118 NLEDWEGEVEFEITCSDMKRLIDSTSFSMAQQDVRYYLNGMSLETEENI--IRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +     +     +I+PRK V EI R+++  D S+KV +  + + +       + 
Sbjct: 176 RLALCRLSYETTLPAR-QVIIPRKGVLEISRLITEDDKSLKVQIGANHLRIFSNDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DKE+  +   L+ A  R +I+S+ + + V+L+LSS +L +T 
Sbjct: 235 KLVDGRFPDYRRVLPQDGDKEIIASKAVLKDAFSRAAILSNEKFRGVRLNLSSGELKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  YL+++++++ S     D+V   L  SN+S  I
Sbjct: 295 NNPEQEEAEEIVDVNYQGDDLEIGFNVAYLIDVLNSLGS-----DDVKISLSDSNASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D+         A YV+MPMR+
Sbjct: 350 EDAADDA---------ALYVIMPMRL 366


>gi|265983182|ref|ZP_06095917.1| DNA polymerase III subunit beta [Brucella sp. 83/13]
 gi|264661774|gb|EEZ32035.1| DNA polymerase III subunit beta [Brucella sp. 83/13]
          Length = 376

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTHSFRIDAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|254718226|ref|ZP_05180037.1| DNA polymerase III subunit beta [Brucella sp. 83/13]
 gi|306839966|ref|ZP_07472760.1| DNA polymerase III, beta subunit [Brucella sp. NF 2653]
 gi|306404930|gb|EFM61215.1| DNA polymerase III, beta subunit [Brucella sp. NF 2653]
          Length = 372

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 1   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 120 LTAGAFTHSFRIDAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 180 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 300 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 355 VRDTGDE---------DVLYVLMPMRV 372


>gi|163867416|ref|YP_001608613.1| DNA polymerase III subunit beta [Bartonella tribocorum CIP 105476]
 gi|161017060|emb|CAK00618.1| DNA polymerase III, beta chain [Bartonella tribocorum CIP 105476]
          Length = 373

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 165/387 (42%), Positives = 253/387 (65%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ITV+R+  L+ LG   R++ER+NT+P+  +VL+ A +G +++K +  ++E+T +   +
Sbjct: 1   MRITVDRNQFLKSLGRVHRVVERRNTVPILSNVLIDAENGHVQLKTTDLDLEVTESFTVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDI+RKL DG +I    +    + +++  G  +F LQ  P+++FP 
Sbjct: 61  VEHAGATTVPAHLLYDIIRKLPDGNEIVLSVDENQASTMSVVSGCVHFQLQCLPKADFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++ Y F L++S LK+L++ T FA++TEE RYYLNGI+FH IN++ LKL  VATDGH
Sbjct: 121 SLPGQFGYRFSLSASGLKHLLDCTQFAISTEETRYYLNGIYFHVINDDVLKLRLVATDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILS-SKDSSVKVSLSESRIHLNIESLSMS 238
           RLA  E++  + +  MP +IVPRKAVGE+ ++LS   D  V + LSE++I  ++ S+  +
Sbjct: 181 RLAQVEMEAPSGVEGMPGVIVPRKAVGELQKLLSEENDGDVCIELSETKIRFSVGSVIFT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKEL VN  +   AVDRVS +SS R +AVKL++   +L + 
Sbjct: 241 SKLIDGTFPDYQRVIPLGNDKELVVNRQDFSSAVDRVSTISSDRGRAVKLTIEHGQLRLV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V++PD G A + ++V Y+  P++I FN +YLL+I   +SS     DE+VF L  + +   
Sbjct: 301 VNSPDSGSAEDQLSVTYSSEPLEIGFNSRYLLDIAGQLSS-----DEMVFMLAEAGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D           +  YVLMP+R+
Sbjct: 356 IRDNDD---------ADVLYVLMPIRV 373


>gi|94502202|ref|ZP_01308697.1| DNA polymerase III subunit beta [Oceanobacter sp. RED65]
 gi|94425663|gb|EAT10676.1| DNA polymerase III subunit beta [Oceanobacter sp. RED65]
          Length = 367

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 215/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK+T+ R  +L+ L     ++ER+ T+PV  +VLL+     L +  +  E+E+ G+    
Sbjct: 1   MKLTITREALLKPLQLVAGVVERRQTLPVLSNVLLEVKGDQLSLTGTDLELELIGSATLL 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
              V G+ITV A  L DI + L D + I   +++    +V +  G S F L S P +EFP
Sbjct: 61  EPGVDGAITVPAKKLMDICKSLPDQSTIEISQDD---HKVQLQTGRSKFVLSSLPANEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + E      +  + L+ +++RT FAMA +++RYYLNG+   +  +  +L AVATDGH
Sbjct: 118 NIDDIEAQAQVMVPQTQLRRIIDRTAFAMAQQDVRYYLNGMLIEVKPD--ELRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA   V +   IA    +IVPRKAV E+ ++L   +SSV++SLS + +   +   + + 
Sbjct: 176 RLATCGVPVELDIADRMQVIVPRKAVLELAKLLMDPESSVELSLSNNHVRAKVGDYTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ VIP + +K L  +   LRQ   R +I+S+ + + V+L L +D L +  
Sbjct: 236 KLVDGKFPDYERVIPRNGNKTLIADRQALRQVFQRTAILSNEKYRGVRLLLENDNLQVVA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A ES+ V +    ++I FN  YL +++  +       D++   L  +NSS  +
Sbjct: 296 NNPEQEQAEESIGVEFQGEMLEIGFNVSYLQDVLSVLDG-----DDMKMTLADANSSAVM 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           ++ YV+MPMR+
Sbjct: 351 EEVE---------GGDSLYVVMPMRL 367


>gi|149912811|ref|ZP_01901345.1| DNA polymerase III, beta subunit [Roseobacter sp. AzwK-3b]
 gi|149813217|gb|EDM73043.1| DNA polymerase III, beta subunit [Roseobacter sp. AzwK-3b]
          Length = 372

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 144/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER  +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKLSIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDTVQFRATDLDIEVVDKAPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A +L++IVRKL DGA ++   ++  G  + +  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVNAVMLHEIVRKLPDGALVTLTDDSATG-RLTVEAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   + VL  L +++ FA++TEE RYYLNG++ H+ +      L  VATDG
Sbjct: 120 MASSEYASNFSAPAPVLLRLFDKSKFAISTEETRYYLNGVYMHVADAEGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+      MP +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPIGAEDMPGVIVPRKTVGELRKLLEDDDMKIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N +++ V+     +AVDRV+ +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKMEVDAAEFAKAVDRVATVSSERSRAVKLTLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|163733263|ref|ZP_02140707.1| DNA polymerase III subunit beta [Roseobacter litoralis Och 149]
 gi|161393798|gb|EDQ18123.1| DNA polymerase III subunit beta [Roseobacter litoralis Och 149]
          Length = 372

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 235/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDVSFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGA ++   ++  G  + +  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSATTLHEIVRKLPDGALVTLTADSATG-RLTVEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+ +      L  VATDG
Sbjct: 120 MATSEYQSNFSAKAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADAEGGRVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+      MP +IVPRK VGE+ ++L + + ++ VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPEDANDMPGVIVPRKTVGELRKLLDNDEMTIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+  +  +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKLEVDAADFARAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYADERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDLSAVYVVMPMRV 372


>gi|300021541|ref|YP_003754152.1| DNA polymerase III subunit beta [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299523362|gb|ADJ21831.1| DNA polymerase III, beta subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 372

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 154/387 (39%), Positives = 234/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ +ER ++L+ L H   ++ER+ TIP+  +++L+A+   L  KA+  E E++ ++ A 
Sbjct: 1   MRLEIERGELLKALSHVTSVVERRTTIPILSNIMLKASGETLMFKATDLEREVSESVGAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G++TV AH+L+DIVRKL DGA+I   ++ E    + I+ G S F LQ+    +FP 
Sbjct: 61  VSTPGTLTVPAHVLHDIVRKLPDGAEIEMKRDGEK-ERLTITSGHSRFSLQTLSAEDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  + F + +  LK L+++T FA++TEE RYYLNGIF H         L AVATDG
Sbjct: 120 LAVGEIGHEFTIEAGDLKRLIDKTRFAISTEETRYYLNGIFLHPAETAGVKTLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+ +      MP +IVPRK V E+ R+L    + V V +S++++   I  + ++
Sbjct: 180 HRLAQVELPLPKGAEGMPGVIVPRKTVHELARLLEDSSAKVNVGVSQTKVRFEIGPVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKE++V   + + AVDRVS ++S R +AVKL+++ DKL +T
Sbjct: 240 SKLIDGTFPDYSRVIPHNNDKEMKVPNASFKSAVDRVSTIASERGRAVKLNVAKDKLILT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NP+ G A E + V Y+  P++I FN +YLL+I D + S     ++  F L    S   
Sbjct: 300 VNNPEGGSATEEIPVGYSAGPLEIGFNARYLLDIADQLES-----EDARFLLADPGSPTM 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R              NA YVLMPMR+
Sbjct: 355 VRDGGDG---------NALYVLMPMRV 372


>gi|189023270|ref|YP_001934038.1| DNA polymerase III subunit beta [Brucella abortus S19]
 gi|254696436|ref|ZP_05158264.1| DNA polymerase III subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731348|ref|ZP_05189926.1| DNA polymerase III subunit beta [Brucella abortus bv. 4 str. 292]
 gi|189018842|gb|ACD71564.1| DNA polymerase III, beta chain [Brucella abortus S19]
          Length = 372

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 1   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 120 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 180 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDTKIRFTVGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 300 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 355 VRDTGDE---------DVLYVLMPMRV 372


>gi|260546287|ref|ZP_05822027.1| DNA polymerase subunit III [Brucella abortus NCTC 8038]
 gi|260759081|ref|ZP_05871429.1| DNA polymerase III subunit beta [Brucella abortus bv. 4 str. 292]
 gi|260760807|ref|ZP_05873150.1| DNA polymerase III subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260096394|gb|EEW80270.1| DNA polymerase subunit III [Brucella abortus NCTC 8038]
 gi|260669399|gb|EEX56339.1| DNA polymerase III subunit beta [Brucella abortus bv. 4 str. 292]
 gi|260671239|gb|EEX58060.1| DNA polymerase III subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 376

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDTKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|62288993|ref|YP_220786.1| DNA polymerase III subunit beta [Brucella abortus bv. 1 str. 9-941]
 gi|82698934|ref|YP_413508.1| DNA polymerase III subunit beta [Brucella melitensis biovar Abortus
           2308]
 gi|237814483|ref|ZP_04593481.1| DNA polymerase III, beta subunit [Brucella abortus str. 2308 A]
 gi|62195125|gb|AAX73425.1| DnaN, DNA polymerase III, beta subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|82615035|emb|CAJ09958.1| DNA polymerase III, beta chain:Inorganic pyrophosphatase [Brucella
           melitensis biovar Abortus 2308]
 gi|237789320|gb|EEP63530.1| DNA polymerase III, beta subunit [Brucella abortus str. 2308 A]
          Length = 397

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 26  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 85

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 86  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 144

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 145 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 204

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 205 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDTKIRFTVGSVVLT 264

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 265 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 324

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 325 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 379

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 380 VRDTGDE---------DVLYVLMPMRV 397


>gi|83950589|ref|ZP_00959322.1| DNA polymerase III subunit beta [Roseovarius nubinhibens ISM]
 gi|83838488|gb|EAP77784.1| DNA polymerase III subunit beta [Roseovarius nubinhibens ISM]
          Length = 372

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER  +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKFSIERGILLKAVSQAQSVVERRNTIPILANVLIEAEGDTVQFRATDLDIEVVDKAPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  GS TVSA  L++IVRKL DGA ++   +   G  + +  G S+F L + P+ +FP 
Sbjct: 61  VERAGSTTVSAVTLHEIVRKLPDGALVTLTDDGAAG-RLAVEAGRSSFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+++ D    L  VATDG
Sbjct: 120 MASSEYASNFSAKAPVLRRLFDKSKFAISTEETRYYLNGVYMHVSDGDGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+      MP +IVPRK VGE+ ++L   D+ + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPDGAGDMPGVIVPRKTVGELRKLLDDDDAVIAVSVSETKVRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRRLEVDAAEFAKAVDRVATVSSERSRAVKLALDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|256158692|ref|ZP_05456571.1| DNA polymerase III subunit beta [Brucella ceti M490/95/1]
 gi|256254093|ref|ZP_05459629.1| DNA polymerase III subunit beta [Brucella ceti B1/94]
 gi|260169592|ref|ZP_05756403.1| DNA polymerase III subunit beta [Brucella sp. F5/99]
          Length = 372

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 1   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 120 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHTIESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 180 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 300 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 355 VRDTGDE---------DVLYVLMPMRV 372


>gi|261221233|ref|ZP_05935514.1| DNA polymerase III subunit beta [Brucella ceti B1/94]
 gi|261759118|ref|ZP_06002827.1| DNA polymerase subunit III [Brucella sp. F5/99]
 gi|265997194|ref|ZP_06109751.1| DNA polymerase III subunit beta [Brucella ceti M490/95/1]
 gi|260919817|gb|EEX86470.1| DNA polymerase III subunit beta [Brucella ceti B1/94]
 gi|261739102|gb|EEY27098.1| DNA polymerase subunit III [Brucella sp. F5/99]
 gi|262551662|gb|EEZ07652.1| DNA polymerase III subunit beta [Brucella ceti M490/95/1]
          Length = 376

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHTIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|225626553|ref|ZP_03784592.1| DNA polymerase III, beta subunit [Brucella ceti str. Cudo]
 gi|225618210|gb|EEH15253.1| DNA polymerase III, beta subunit [Brucella ceti str. Cudo]
          Length = 397

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 26  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 85

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 86  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 144

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 145 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHTIESDGALKLRAVATDG 204

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 205 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 264

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 265 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 324

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 325 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 379

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 380 VRDTGDE---------DVLYVLMPMRV 397


>gi|254700820|ref|ZP_05162648.1| DNA polymerase III subunit beta [Brucella suis bv. 5 str. 513]
 gi|254705187|ref|ZP_05167015.1| DNA polymerase III subunit beta [Brucella suis bv. 3 str. 686]
 gi|254707297|ref|ZP_05169125.1| DNA polymerase III subunit beta [Brucella pinnipedialis M163/99/10]
 gi|254709164|ref|ZP_05170975.1| DNA polymerase III subunit beta [Brucella pinnipedialis B2/94]
 gi|254713412|ref|ZP_05175223.1| DNA polymerase III subunit beta [Brucella ceti M644/93/1]
 gi|254716231|ref|ZP_05178042.1| DNA polymerase III subunit beta [Brucella ceti M13/05/1]
 gi|256030688|ref|ZP_05444302.1| DNA polymerase III subunit beta [Brucella pinnipedialis M292/94/1]
 gi|256045792|ref|ZP_05448670.1| DNA polymerase III subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256060147|ref|ZP_05450329.1| DNA polymerase III subunit beta [Brucella neotomae 5K33]
 gi|256112511|ref|ZP_05453432.1| DNA polymerase III subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|326408013|gb|ADZ65078.1| DNA polymerase III, beta chain [Brucella melitensis M28]
          Length = 372

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 1   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 120 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 180 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 300 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 355 VRDTGDE---------DVLYVLMPMRV 372


>gi|260563085|ref|ZP_05833571.1| DNA polymerase subunit III [Brucella melitensis bv. 1 str. 16M]
 gi|261218004|ref|ZP_05932285.1| DNA polymerase III subunit beta [Brucella ceti M13/05/1]
 gi|261314778|ref|ZP_05953975.1| DNA polymerase III subunit beta [Brucella pinnipedialis M163/99/10]
 gi|261316661|ref|ZP_05955858.1| DNA polymerase III subunit beta [Brucella pinnipedialis B2/94]
 gi|261321146|ref|ZP_05960343.1| DNA polymerase III subunit beta [Brucella ceti M644/93/1]
 gi|261324124|ref|ZP_05963321.1| DNA polymerase III subunit beta [Brucella neotomae 5K33]
 gi|261751326|ref|ZP_05995035.1| DNA polymerase III subunit beta [Brucella suis bv. 5 str. 513]
 gi|261755891|ref|ZP_05999600.1| DNA polymerase III subunit beta [Brucella suis bv. 3 str. 686]
 gi|265987733|ref|ZP_06100290.1| DNA polymerase III subunit beta [Brucella pinnipedialis M292/94/1]
 gi|265992207|ref|ZP_06104764.1| DNA polymerase III subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993947|ref|ZP_06106504.1| DNA polymerase III subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|265999708|ref|ZP_05467475.2| DNA polymerase subunit III [Brucella melitensis bv. 2 str. 63/9]
 gi|260153101|gb|EEW88193.1| DNA polymerase subunit III [Brucella melitensis bv. 1 str. 16M]
 gi|260923093|gb|EEX89661.1| DNA polymerase III subunit beta [Brucella ceti M13/05/1]
 gi|261293836|gb|EEX97332.1| DNA polymerase III subunit beta [Brucella ceti M644/93/1]
 gi|261295884|gb|EEX99380.1| DNA polymerase III subunit beta [Brucella pinnipedialis B2/94]
 gi|261300104|gb|EEY03601.1| DNA polymerase III subunit beta [Brucella neotomae 5K33]
 gi|261303804|gb|EEY07301.1| DNA polymerase III subunit beta [Brucella pinnipedialis M163/99/10]
 gi|261741079|gb|EEY29005.1| DNA polymerase III subunit beta [Brucella suis bv. 5 str. 513]
 gi|261745644|gb|EEY33570.1| DNA polymerase III subunit beta [Brucella suis bv. 3 str. 686]
 gi|262764928|gb|EEZ10849.1| DNA polymerase III subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003273|gb|EEZ15566.1| DNA polymerase III subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263095428|gb|EEZ19029.1| DNA polymerase subunit III [Brucella melitensis bv. 2 str. 63/9]
 gi|264659930|gb|EEZ30191.1| DNA polymerase III subunit beta [Brucella pinnipedialis M292/94/1]
 gi|326537731|gb|ADZ85946.1| DNA polymerase III, beta subunit [Brucella melitensis M5-90]
          Length = 376

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|17988225|ref|NP_540859.1| DNA polymerase III subunit beta [Brucella melitensis bv. 1 str.
           16M]
 gi|23500918|ref|NP_697045.1| DNA polymerase III subunit beta [Brucella suis 1330]
 gi|163842279|ref|YP_001626683.1| DNA polymerase III subunit beta [Brucella suis ATCC 23445]
 gi|225851548|ref|YP_002731781.1| DNA polymerase III subunit beta [Brucella melitensis ATCC 23457]
 gi|256368467|ref|YP_003105973.1| DNA polymerase III subunit beta [Brucella microti CCM 4915]
 gi|294851412|ref|ZP_06792085.1| DNA polymerase III [Brucella sp. NVSL 07-0026]
 gi|17983990|gb|AAL53123.1| DNA polymerase iii, beta chain [Brucella melitensis bv. 1 str. 16M]
 gi|23346771|gb|AAN28960.1| DNA polymerase III, beta subunit [Brucella suis 1330]
 gi|163673002|gb|ABY37113.1| DNA polymerase III, beta subunit [Brucella suis ATCC 23445]
 gi|225639913|gb|ACN99826.1| DNA polymerase III, beta subunit [Brucella melitensis ATCC 23457]
 gi|255998625|gb|ACU47024.1| DNA polymerase III subunit beta [Brucella microti CCM 4915]
 gi|294820001|gb|EFG37000.1| DNA polymerase III [Brucella sp. NVSL 07-0026]
          Length = 397

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 26  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 85

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 86  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 144

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 145 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 204

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 205 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 264

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 265 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 324

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 325 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 379

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 380 VRDTGDE---------DVLYVLMPMRV 397


>gi|159045914|ref|YP_001534708.1| DNA polymerase III subunit beta [Dinoroseobacter shibae DFL 12]
 gi|157913674|gb|ABV95107.1| DNA polymerase III subunit beta [Dinoroseobacter shibae DFL 12]
          Length = 372

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 145/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L  +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+   + A 
Sbjct: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV A  L++IVRKL DGA ++   +   G  + +S G SNF L + P  +FP 
Sbjct: 61  VERAGATTVPAVTLHEIVRKLPDGALVALTHDTAKG-RLEVSAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+ +      L  VATDG
Sbjct: 120 MTTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+      MP +IVPRK VGE+ ++L   ++ + VS+SE++I      ++++
Sbjct: 180 HRLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP SN ++L V+ +   +AVDRV+ +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +S+     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSAADPTM 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + +  +A YV+MPMR+
Sbjct: 355 MR---------EGSDSSAIYVVMPMRV 372


>gi|260567347|ref|ZP_05837817.1| DNA polymerase subunit III [Brucella suis bv. 4 str. 40]
 gi|260156865|gb|EEW91945.1| DNA polymerase subunit III [Brucella suis bv. 4 str. 40]
          Length = 376

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDI+RKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIIRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|161617993|ref|YP_001591880.1| DNA polymerase III subunit beta [Brucella canis ATCC 23365]
 gi|161334804|gb|ABX61109.1| DNA polymerase III, beta subunit [Brucella canis ATCC 23365]
          Length = 397

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 26  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 85

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDI+RKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 86  VEQAGATTVPAHLLYDIIRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 144

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 145 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 204

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 205 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 264

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 265 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 324

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 325 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 379

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 380 VRDTGDE---------DVLYVLMPMRV 397


>gi|83591342|ref|YP_425094.1| DNA polymerase III subunit beta [Rhodospirillum rubrum ATCC 11170]
 gi|83574256|gb|ABC20807.1| DNA polymerase III, beta subunit [Rhodospirillum rubrum ATCC 11170]
          Length = 372

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 224/387 (57%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH   ++ER+NTIP+  +V ++  +    + A+  ++EI   + A+
Sbjct: 1   MKLTIERTALLKSLGHVQSVVERRNTIPILSNVRMETGESGFSLNATDMDLEIVETVTAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G+ T  AH LYDIVRKL DG+Q+    +   G ++ +  G S F L   P  +FP+
Sbjct: 61  TLAPGATTAPAHTLYDIVRKLPDGSQVELSYDGNDG-QLVLKAGRSRFSLSCLPVEDFPA 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               E+ +SF L ++ L+ L++RT FA++TEE RYYLNGI+ H  E      L AVATDG
Sbjct: 120 LSAGEFSHSFSLPATDLRGLIDRTRFAISTEETRYYLNGIYLHATESAGVPVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE+ + A  A MP +IVPRK VGE+ +++      + V LSE +I  + +   ++
Sbjct: 180 HRLARAEIPLPAGAAGMPGVIVPRKTVGELRKLIEETGMDITVGLSEQKIRFDFDETRLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDK L V+C    QA DRVS +S+ + +A+K++++   + ++
Sbjct: 240 SKLIDGTFPDYERVIPTENDKVLEVDCKLFAQAADRVSAISTEKSRAIKVAVAKGTMTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             +PD G A+E +   Y    ++I FN +YLL+I+  +         V      + S   
Sbjct: 300 ASSPDAGSAVEEIEAAYQSTSLEIGFNSRYLLDILGQVEG-----GSVRLTFADAASPTV 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR     S         A YVLMPMR+
Sbjct: 355 IRDVADAS---------AVYVLMPMRV 372


>gi|294010896|ref|YP_003544356.1| DNA polymerase III beta subunit [Sphingobium japonicum UT26S]
 gi|292674226|dbj|BAI95744.1| DNA polymerase III beta subunit [Sphingobium japonicum UT26S]
          Length = 370

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 149/387 (38%), Positives = 237/387 (61%), Gaps = 19/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ L H   ++ER+NTIP+  +VL++A+ DG +++ A+  +++I  ++ A
Sbjct: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQIVESVSA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            V+  G+ T+SAH L+DI RKL +G+Q+S    +    ++ I  G + F L + P  +FP
Sbjct: 61  QVEQPGATTISAHTLFDIARKLPEGSQVSL---HAAEGKMLIQAGRARFNLSTLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKL-CAVATDG 178
              E +   SFEL +  LK ++++T FA++TEE RYYLNGI+FH++++   +  A ATDG
Sbjct: 118 VIAEGDLPTSFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSDDGQPVLKAAATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   V        MP IIVPRK +GE+ ++L   D SV++SLS S+I   + S  ++
Sbjct: 178 HRLARVTVPRPDGADGMPGIIVPRKCIGELRKLLDEVDGSVQISLSASKIRFGLGSAILT 237

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDK L+++  +  + VDRV+ +++ + +AVK++L  DK+ ++
Sbjct: 238 SKLIDGTFPDYSRVIPTANDKLLKIDPRSFEEGVDRVATIATEKTRAVKMTLDRDKITLS 297

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V +P+ G A E +   +     DI FN +YLL+I+  I S     D V   L  + +   
Sbjct: 298 VTSPENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDS-----DLVELHLADAAAPTL 352

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D+           A YVLMPMR+
Sbjct: 353 IREDDRSP---------ALYVLMPMRV 370


>gi|221640842|ref|YP_002527104.1| DNA polymerase III subunit beta [Rhodobacter sphaeroides KD131]
 gi|221161623|gb|ACM02603.1| DNA polymerase III, beta subunit [Rhodobacter sphaeroides KD131]
          Length = 372

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 231/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +G A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERGALLKAVGQAQSVVERRNTIPILANVLIEAEGDTVSFRATDLDIEVVDRTPAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DGA +   ++   G  + ++ G S F L + P+ +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPDGALVGLSEDPASG-RLTVTAGRSVFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F+  + VL+ L ++  FA++TEE RYYLNG+F H+   +    L  VATDG
Sbjct: 120 MASSEYSSTFKAPAPVLRRLFDKAKFAISTEETRYYLNGVFMHVATGEEGPVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      MP +IVPRK V E+ ++L   +  + VS+SE+++      ++M+
Sbjct: 180 HRLARIDAALPEGAQGMPGVIVPRKTVNELRKLLDDDEVEIAVSVSETKVRFATPQITMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPTANARRLEVDAQEFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAVYVVMPMRV 372


>gi|146276061|ref|YP_001166220.1| DNA polymerase III subunit beta [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554302|gb|ABP68915.1| DNA polymerase III, beta subunit [Rhodobacter sphaeroides ATCC
           17025]
          Length = 372

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 229/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +G A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERGALLKAVGQAQSVVERRNTIPILANVLIEAEGDTVSFRATDLDIEVVDRTPAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DGA +   ++   G  + ++ G S F L + P  +FP 
Sbjct: 61  VERPGATTVSAVMLHEIVRKLPDGALVGLSEDAASG-RLTVTAGRSVFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F   + VL+ L ++  FA++TEE RYYLNG+F H+   +    L  VATDG
Sbjct: 120 MASSEYSSNFTAPAPVLRRLFDKAKFAISTEETRYYLNGVFMHVATGEEGPVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      M  +IVPRK V E+ ++L   ++ +KVS+SE+++      ++M+
Sbjct: 180 HRLARIDAPLPEGAEGMAGVIVPRKTVNELRKLLDDDEAQIKVSVSETKVRFATPQITMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPTGNARRLEVDAQEFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAVYVVMPMRV 372


>gi|153007349|ref|YP_001368564.1| DNA polymerase III subunit beta [Ochrobactrum anthropi ATCC 49188]
 gi|151559237|gb|ABS12735.1| DNA polymerase III, beta subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 385

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 168/387 (43%), Positives = 243/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 14  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLALKATDLDLEVNEATAAM 73

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 74  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SISVISGKSSFRLQCLPQSDFPE 132

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   +E  LKL AVATDG
Sbjct: 133 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESEGALKLRAVATDG 192

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 193 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 252

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L +       +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 253 SKLIDGTFPDYQRVIPSGNDKKLTIGRQEFAASVDRVSTISSERGRAVKLSIADGQLTLT 312

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 313 VNNPDSGSATDELAADYDADPLDIGFNSKYLLDITSQLSGS-----DAVFMLADAGSPTL 367

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 368 VRDTGDE---------DVLYVLMPMRV 385


>gi|261215133|ref|ZP_05929414.1| DNA polymerase III subunit beta [Brucella abortus bv. 3 str. Tulya]
 gi|260916740|gb|EEX83601.1| DNA polymerase III subunit beta [Brucella abortus bv. 3 str. Tulya]
          Length = 376

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVYRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|254694808|ref|ZP_05156636.1| DNA polymerase III subunit beta [Brucella abortus bv. 3 str. Tulya]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 1   MRVTLERSNLLKSLNHVYRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 120 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 180 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 300 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 355 VRDTGDE---------DVLYVLMPMRV 372


>gi|254690319|ref|ZP_05153573.1| DNA polymerase III subunit beta [Brucella abortus bv. 6 str. 870]
 gi|256258573|ref|ZP_05464109.1| DNA polymerase III subunit beta [Brucella abortus bv. 9 str. C68]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 244/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 1   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 61  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                +  SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 120 LTAGAFTNSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 180 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDTKIRFTVGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 300 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 355 VRDTGDE---------DVLYVLMPMRV 372


>gi|297247410|ref|ZP_06931128.1| DNA polymerase III, beta subunit [Brucella abortus bv. 5 str.
           B3196]
 gi|297174579|gb|EFH33926.1| DNA polymerase III, beta subunit [Brucella abortus bv. 5 str.
           B3196]
          Length = 397

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 244/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 26  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 85

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 86  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 144

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                +  SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 145 LTAGAFTNSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 204

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 205 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDTKIRFTVGSVVLT 264

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 265 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 324

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 325 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 379

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 380 VRDTGDE---------DVLYVLMPMRV 397


>gi|260755858|ref|ZP_05868206.1| DNA polymerase III subunit beta [Brucella abortus bv. 6 str. 870]
 gi|260884883|ref|ZP_05896497.1| DNA polymerase III subunit beta [Brucella abortus bv. 9 str. C68]
 gi|260675966|gb|EEX62787.1| DNA polymerase III subunit beta [Brucella abortus bv. 6 str. 870]
 gi|260874411|gb|EEX81480.1| DNA polymerase III subunit beta [Brucella abortus bv. 9 str. C68]
          Length = 376

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 167/387 (43%), Positives = 244/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 5   MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 64

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 65  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 123

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                +  SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 124 LTAGAFTNSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 183

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 184 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDTKIRFTVGSVVLT 243

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 244 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 303

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 304 VNNPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 358

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 359 VRDTGDE---------DVLYVLMPMRV 376


>gi|83944867|ref|ZP_00957233.1| DNA polymerase III subunit beta [Oceanicaulis alexandrii HTCC2633]
 gi|83851649|gb|EAP89504.1| DNA polymerase III subunit beta [Oceanicaulis alexandrii HTCC2633]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 152/387 (39%), Positives = 226/387 (58%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH   ++ER+NTIP+  +VL+ A+DG     A+  ++EI     AS
Sbjct: 1   MKLTIERAILLKALGHVQAVVERRNTIPILSNVLINASDGFARFTATDLDMEIVEEAEAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G IT  AH LY+I RKL +G+Q++     +    + +S G S F L   P  +FP 
Sbjct: 61  VEREGLITAPAHTLYEIARKLPEGSQVTLELGGDD-PRILLSAGRSRFNLPILPPGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
              E+   SF   +S +  L+++T FA++TEE RYYLNGI  H    +    L AVATDG
Sbjct: 120 MPSEDLAVSFTAPASEIARLIDKTKFAISTEETRYYLNGIHLHAAERDGRKTLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE D+      MP++IVPRK + E+ R+L   D  V VS+SE +I   + +  ++
Sbjct: 180 HRLALAETDLPDGAMGMPAVIVPRKPIQELRRLLEDLDGDVDVSVSEGKIRFQLGAAVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  NDK +R++     QAVDRV+ +S  + ++VKLSL+  ++ +T
Sbjct: 240 SKLIDGTFPDYERVIPRGNDKVMRIDRAPFAQAVDRVATISQEKSRSVKLSLAPGQVTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NP+ G A E +   Y+   M I FN +YLL++   I       DE +F L  S S   
Sbjct: 300 VNNPESGAASEELVADYSADEMTIGFNARYLLDVASQIEG-----DEAIFELADSGSPTR 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +               +A YVLMP+R+
Sbjct: 355 VTDSGD---------KDAEYVLMPLRV 372


>gi|126460790|ref|YP_001041904.1| DNA polymerase III subunit beta [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559820|ref|ZP_08414142.1| DNA polymerase III subunit beta [Rhodobacter sphaeroides WS8N]
 gi|126102454|gb|ABN75132.1| DNA polymerase III, beta subunit [Rhodobacter sphaeroides ATCC
           17029]
 gi|332277532|gb|EGJ22847.1| DNA polymerase III subunit beta [Rhodobacter sphaeroides WS8N]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 230/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +G A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERGALLKAVGQAQSVVERRNTIPILANVLIEAEGDTVSFRATDLDIEVVDRTPAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DGA +   ++   G  + ++ G S F L + P  +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPDGALVGLSEDPASG-RLTVTAGRSVFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F+  + VL+ L ++  FA++TEE RYYLNG++ H+   +    L  VATDG
Sbjct: 120 MASSEYSSTFKAPAPVLRRLFDKAKFAISTEETRYYLNGVYMHVATGEEGPVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      MP +IVPRK V E+ ++L   +  + VS+SE+++      ++M+
Sbjct: 180 HRLARIDAALPEGAQGMPGVIVPRKTVNELRKLLDDDEVEIAVSVSETKVRFATPQITMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPTANARRLEVDAQEFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAVYVVMPMRV 372


>gi|254486821|ref|ZP_05100026.1| DNA polymerase III, beta subunit [Roseobacter sp. GAI101]
 gi|214043690|gb|EEB84328.1| DNA polymerase III, beta subunit [Roseobacter sp. GAI101]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ +  A  ++ER+NTIP+  +VL++A       +A+  +IE+    PA 
Sbjct: 1   MKFSIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDASFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ TVSA  L++IVRKL DGA I+   ++  G  + +  G SNF L + P  +FP 
Sbjct: 61  IERAGATTVSATTLHEIVRKLPDGALITLTSDSAAG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ HI  +E +  L  VATDG
Sbjct: 120 MASSEYQSNFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHISESEGNKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      MP +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDAPMPEGADDMPGVIVPRKTVGELRKLLDDDDMQIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N +++ V+ ++  +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKMEVDASDFARAVDRVATVSSERSRAVKLQLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELVVAYADERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAVYVVMPMRV 372


>gi|255261800|ref|ZP_05341142.1| DNA polymerase III, beta subunit [Thalassiobium sp. R2A62]
 gi|255104135|gb|EET46809.1| DNA polymerase III, beta subunit [Thalassiobium sp. R2A62]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ERS +L+ +  A  ++ER+NTIP+  +VL++A       +A+  +IE+    PA 
Sbjct: 1   MKISIERSILLKAVAQAQSVVERRNTIPILANVLIEAEGDSATFRATDLDIEVVDKAPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L +IVRKL DGA ++   ++  G  + I  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVAAVTLNEIVRKLPDGALVTLTDDSATG-RLTIEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+  ++    L  VATDG
Sbjct: 120 MASSEYAANFSAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADSDGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+    + M  +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPDGASDMAGVIVPRKTVGELRKLLDDDDVQIAVSVSETKVRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+  +  +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKLEVDAADFAKAVDRVATVSSERSRAVKLQLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V YN+  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEEIAVAYNDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|13474647|ref|NP_106216.1| DNA polymerase III subunit beta [Mesorhizobium loti MAFF303099]
 gi|260461962|ref|ZP_05810207.1| DNA polymerase III, beta subunit [Mesorhizobium opportunistum
           WSM2075]
 gi|14025402|dbj|BAB52002.1| DNA polymerase III beta subunit [Mesorhizobium loti MAFF303099]
 gi|259032209|gb|EEW33475.1| DNA polymerase III, beta subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 372

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 169/387 (43%), Positives = 243/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ +ERS++L+ L H  R++ER+NTIP+  +VLL A    LE+KA+  ++E+T A PA 
Sbjct: 1   MRVILERSNLLKSLNHVHRVVERRNTIPILSNVLLSAEGASLEMKATDLDLEVTEATPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++    + E G  + ++ G S+F LQ  P+S+FP 
Sbjct: 61  VERGGATTVPAHLLYDIVRKLSDGAEVMLKTD-EDGNAMTVTSGRSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
                + + F L S  LK L+E+T FA++TEE RYYLNGI+ H +E    LKL +VATDG
Sbjct: 120 LSAGSFSHIFRLDSVALKGLIEKTQFAISTEETRYYLNGIYLHTHEVGGKLKLRSVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE+D  A    MP II+PRK V E+ +++   D +V   LS+++I   I S+ ++
Sbjct: 180 HRLARAEIDAPAGSEGMPGIIIPRKTVSELQKLVDDPDVAVTTELSDTKIRFTIGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   AVDRVS +SS R +AVKLS+S  ++ + 
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKKLILDRQSFAAAVDRVSTISSERGRAVKLSISEGQVTLA 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E +   Y+  P++I FN KYLL++   ++       E  F L  + S   
Sbjct: 300 VNNPDSGSATEELAADYSSDPIEIGFNAKYLLDVAAQLTGT-----EAKFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I     ++         A YVLMPMR+
Sbjct: 355 IHDMADET---------ALYVLMPMRV 372


>gi|260574426|ref|ZP_05842430.1| DNA polymerase III, beta subunit [Rhodobacter sp. SW2]
 gi|259023322|gb|EEW26614.1| DNA polymerase III, beta subunit [Rhodobacter sp. SW2]
          Length = 372

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 232/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ L  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKALSQAQSVVERRNTIPILANVLIEAEGANVSFRATDLDIEVVDRAPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL +GA +S  ++   G  + I+ G S F L + P+ +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPEGALVSLAEDGAAG-RLTITAGRSTFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F   + +L+ L ++  FA++TEE RYYLNG++ H++  +    L AVATDG
Sbjct: 120 MANAEYASNFSAPAPLLRRLFDKAKFAISTEETRYYLNGVYLHVSTGESGPVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +    A MP +IVPRK V E+ ++L   ++ + VS+SE+++      L+++
Sbjct: 180 HRLARIDAPLPEGAAGMPGVIVPRKTVNELRKLLDDDEAQIAVSVSETKVRFATPVLTLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPTGNTRRLEVDAAEFARAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|209966326|ref|YP_002299241.1| DNA polymerase III subunit beta [Rhodospirillum centenum SW]
 gi|209959792|gb|ACJ00429.1| DNA polymerase III, beta subunit [Rhodospirillum centenum SW]
          Length = 374

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 148/391 (37%), Positives = 230/391 (58%), Gaps = 23/391 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKIT+ER+ +L  LGH   ++ER+NTIP+  +V+L+A +G L + A+  ++EI  ++PA 
Sbjct: 1   MKITIERAALLRSLGHVQSVVERRNTIPILSNVMLRAENGELSLTATDMDLEIVESVPAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   GS T  AH LYDI RKL DG+Q+      ++   + +  G S F L + P  ++P+
Sbjct: 61  IARPGSATAPAHTLYDIARKLPDGSQVELDSTGDM---LTLRSGRSQFKLGTLPVDDYPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE------EDLKLCAV 174
               +  + F L+++ LK L++RT FA++TEE RYYLNGIF H +       E   L AV
Sbjct: 118 MSGGDMGHRFSLSAADLKALIDRTRFAISTEETRYYLNGIFLHASTARGAGGETPVLRAV 177

Query: 175 ATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           ATDGHRLA  E+ +    A +P +I+PRKAV E+ ++L      ++V LS++++    ++
Sbjct: 178 ATDGHRLARVEMPLPEGAAGIPGVIIPRKAVLEVRKLLDEAADRIEVQLSDTKVRFAFDA 237

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           ++++ +LIDG FP+Y+ VIP  NDK L V+      AVDRV+ +S+ + +AVKLSL    
Sbjct: 238 ITLTSKLIDGTFPDYERVIPTGNDKVLEVDPRLFAGAVDRVATISTEKSRAVKLSLDRGV 297

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  +P+ G A E + V Y+   ++I FN +YLL+I   I       +   F +  + 
Sbjct: 298 LTLSASSPEAGSATEELEVVYDAPALEIGFNSRYLLDITQQIEG-----EGARFTMADAG 352

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           S   +R     S         A YVLMPMR+
Sbjct: 353 SPTLVRDVADAS---------ALYVLMPMRV 374


>gi|77464921|ref|YP_354425.1| DNA polymerase III subunit beta [Rhodobacter sphaeroides 2.4.1]
 gi|77389339|gb|ABA80524.1| DNA polymerase III, beta subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 372

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 230/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +G A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERGALLKAVGQAQSVVERRNTIPILANVLIEAEGDTVSFRATDLDIEVVDRTPAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DGA +   ++   G  + ++ G S F L + P  +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPDGALVGLSEDPASG-RLTVTAGRSVFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL--KLCAVATDG 178
               EY  +F+  + VL+ L ++  FA++TEE RYYLNG++ H+   +    L  VATDG
Sbjct: 120 MASSEYSSTFKAPAPVLRRLFDKAKFAISTEETRYYLNGVYMHVATGEEGSVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      MP +IVPRK V E+ ++L   +  + VS+SE+++      ++M+
Sbjct: 180 HRLARIDAALPEGAQGMPGVIVPRKTVNELRKLLDDDEVEIAVSVSETKVRFATPQITMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYSRVIPTANARRLEVDAQEFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAVYVVMPMRV 372


>gi|240849790|ref|YP_002971178.1| DNA polymerase III subunit beta [Bartonella grahamii as4aup]
 gi|240266913|gb|ACS50501.1| DNA polymerase III subunit beta [Bartonella grahamii as4aup]
          Length = 373

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 162/387 (41%), Positives = 249/387 (64%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ITV+RS  L+ LG   R++ER+NT+P+  +VL+ A +G +++KA+  ++E+T +   +
Sbjct: 1   MRITVDRSQFLKSLGRVHRVVERRNTVPILSNVLIDAENGSVQLKATDLDLEVTESFAVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AHLLYDI+RKL D  ++    +      +++  G ++F LQ  P+++FP 
Sbjct: 61  VKQAGATTVPAHLLYDIIRKLPDSNEVVLSVDENQAGTMSVVSGCAHFQLQCLPKADFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL-KLCAVATDGH 179
           +   ++ Y F L++S LK+L++ T FA++TEE RYYLNGI+ H+  + + KL  VATDGH
Sbjct: 121 SLPGQFGYRFSLSASSLKHLLDCTQFAISTEETRYYLNGIYLHVINDGVLKLRLVATDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILS-SKDSSVKVSLSESRIHLNIESLSMS 238
           RLA  E++  + +  MP +IVPRKAVGE+ ++LS   DS V + LSE++I  ++ S+  +
Sbjct: 181 RLAQVEMEAPSGVEGMPGVIVPRKAVGELQKLLSEENDSDVCIELSETKIRFSVGSVIFT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKEL VN  +   AVDRVS +SS R +AVKL++   +L + 
Sbjct: 241 SKLIDGTFPDYQRVIPLGNDKELIVNRQDFSSAVDRVSTISSDRGRAVKLTIEHRQLRLV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V++PD G A + ++V Y   P++I FN +YLL+I   +SS     DE+VF L  + +   
Sbjct: 301 VNSPDSGSAEDQLSVTYASEPLEIGFNSRYLLDIAGQLSS-----DEMVFMLAEAGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D           +  YVLMP+R+
Sbjct: 356 IRDNDD---------ADVLYVLMPIRV 373


>gi|254439754|ref|ZP_05053248.1| DNA polymerase III, beta subunit [Octadecabacter antarcticus 307]
 gi|198255200|gb|EDY79514.1| DNA polymerase III, beta subunit [Octadecabacter antarcticus 307]
          Length = 372

 Score =  282 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 144/387 (37%), Positives = 229/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +  A  ++ER+NTIP+  +VL++A+      +A+  +IE+     A 
Sbjct: 1   MKISIERASLLKAVAQAQSVVERRNTIPILANVLIEASGDEATFRATDLDIEVVDKATAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L +IVRKL DGA ++   ++  G  + I  G SNF L + P+ +FP 
Sbjct: 61  VERAGATTVSAVTLNEIVRKLPDGALVTLTDDSASG-RLTIEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               +Y  +F   + VL+ L +++ FA++TEE RYYLNG++ H   ++    L  VATDG
Sbjct: 120 MASSDYATNFSCPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVSESDGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      M  +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDAALPEGADGMAGVIVPRKTVGELRKLLDDDDMMIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N +++ V+     +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQNNTRKMEVDAAEFARAVDRVATVSSERSRAVKLQLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E ++V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELSVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAIYVVMPMRV 372


>gi|323493782|ref|ZP_08098900.1| DNA polymerase III subunit beta [Vibrio brasiliensis LMG 20546]
 gi|323311916|gb|EGA65062.1| DNA polymerase III subunit beta [Vibrio brasiliensis LMG 20546]
          Length = 366

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 220/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + T+P+  ++LL+  D +L + A+  E+E+   +   
Sbjct: 1   MKFSIERSHLLKPLQQVSGALGGRPTLPILGNLLLKVEDNVLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV +    DI R L D + I+F  +   G  V +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPSRKFLDICRGLPDDSVITFVLD---GDRVQVRSGRSRFSLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ LVE+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQAELRGLVEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++V + A  A+   IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQVQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGSSNVRAEVNNYVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S  K L   C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSTTKTLEAGCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVSFEGEPIEIGFNVSYVLDVLNTLRC-----EKVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|254295379|ref|YP_003061402.1| DNA polymerase III subunit beta [Hirschia baltica ATCC 49814]
 gi|254043910|gb|ACT60705.1| DNA polymerase III, beta subunit [Hirschia baltica ATCC 49814]
          Length = 374

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 150/389 (38%), Positives = 230/389 (59%), Gaps = 19/389 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T++R  +++ L H   ++ER+NTIP+  +VL+ A    L + A+  ++E +    A 
Sbjct: 1   MKLTIDRGALMKALSHVQNVVERRNTIPILSNVLIDAEGTSLRLTATDLDMEASDTTIAH 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  GS+T  A  L+D+VRKL DG+ I    + E    + I+ G S F L + P  +F +
Sbjct: 61  IEKPGSVTAPAQTLFDVVRKLPDGSDIGLLLDTE-TRRLTITSGRSRFALPTLPADDFQT 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
             +EE   SFE+ ++  + L+++T FA++TEE RYYLNG++ H  E    +KL  VATDG
Sbjct: 120 MSKEEAPNSFEIPAADFRRLIDKTKFAISTEETRYYLNGVYMHGTEVGGAVKLRTVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK--DSSVKVSLSESRIHLNIESLS 236
           HRLA+AE D       +P II+PRKA+ EI R+L     DS V VS SES+I + +    
Sbjct: 180 HRLALAEADAPKGAETLPGIIIPRKAIAEIRRLLDDAAQDSDVSVSTSESKIVVKVGDAV 239

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           ++ +LIDG FP+Y  VIP SN K L +  +  + AVDRV+ +S+ R ++VKL+L +DKL 
Sbjct: 240 ITSKLIDGSFPDYSRVIPQSNSKILVLKNSEFKSAVDRVATVSAERSRSVKLTLENDKLV 299

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           + V N + G+ +E +   Y++ PM+I FN +YLL++   I       DE+ F L+ S SS
Sbjct: 300 LQVSNAETGQGVEELEAQYSDEPMEIGFNARYLLDVTQQIEG-----DEIRFELNDSASS 354

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             +                A YVLMP+R+
Sbjct: 355 ARVTD---------LADQGAQYVLMPLRV 374


>gi|148560207|ref|YP_001258051.1| DNA polymerase III subunit beta [Brucella ovis ATCC 25840]
 gi|148371464|gb|ABQ61443.1| DNA polymerase III, beta subunit [Brucella ovis ATCC 25840]
          Length = 397

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 245/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 26  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLAMKATDLDLEVNEATAAM 85

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 86  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 144

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 145 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 204

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   D  V V LS+++I   + S+ ++
Sbjct: 205 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELSDAKIRFTVGSVVLT 264

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 265 SKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDRVSTISSERGRAVKLSIADGQLTLT 324

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V++PD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 325 VNSPDSGSATDELAADYDGDPLDIGFNSKYLLDITGQLSGT-----DAVFMLADAGSPTL 379

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 380 VRDTGDE---------DVLYVLMPMRV 397


>gi|83855143|ref|ZP_00948673.1| DNA polymerase III subunit beta [Sulfitobacter sp. NAS-14.1]
 gi|83941666|ref|ZP_00954128.1| DNA polymerase III subunit beta [Sulfitobacter sp. EE-36]
 gi|83842986|gb|EAP82153.1| DNA polymerase III subunit beta [Sulfitobacter sp. NAS-14.1]
 gi|83847486|gb|EAP85361.1| DNA polymerase III subunit beta [Sulfitobacter sp. EE-36]
          Length = 372

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 233/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ +  A  ++ER+NTIP+  +VL++A       +A+  +IE+     A 
Sbjct: 1   MKFSIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDASFRATDLDIEVVDKAAAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DGA IS   ++  G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVSATTLHEIVRKLPDGALISLTADSAAG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F+  + VL+ L +++ FA++TEE RYYLNG++ HI++      L  VATDG
Sbjct: 120 MATSEYQSNFKAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHISDSEGSKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +    A+MP +IVPRK VGE+ ++L   D  + VS+SE++I      ++++
Sbjct: 180 HRLARIDAPMPEGAAEMPGVIVPRKTVGELRKLLDDDDMEIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N +++ V+ ++  +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKMEVDASDFARAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELVVAYADERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N ++A YV+MPMR+
Sbjct: 355 MR---------EGNDMSAVYVVMPMRV 372


>gi|311696594|gb|ADP99467.1| DNA polymerase III, beta chain [marine bacterium HP15]
          Length = 367

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 215/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAI-PA 59
           MK+T+ R  +L  L     ++E+K T+PV  +VLL A D  L +  +  E+E+   + P 
Sbjct: 1   MKLTISRESLLTPLQSIAGVVEKKQTMPVLSNVLLVAEDNTLTLTGTNMEVELVARVTPV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  G ITV A  L DI R L D A +    E   G  +++  G S+F L + P   FP
Sbjct: 61  HVDQPGRITVPARKLSDISRALGDEAPMELSLE---GDRLHLRCGASHFTLSTLPAEHFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++E+  +  EL    L  +++ T FAMA +++RYYLNG+   ++++   +  VATDGH
Sbjct: 118 NVEDEDESFRLELPQKELGRMLDATAFAMAQQDVRYYLNGLLLEVDKDH--VRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A +++     ++  +IVPRK V E+ R+L   ++ V + + ++ +   + S + + 
Sbjct: 176 RLAMAHLELATNCPELRQVIVPRKGVLELARLLDDVETPVTLVIGDNHLRATVGSYTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LI+G+FP+Y  VIP   DK +  +   L+  + R  I+S   I+ V+L+L+S++L +  
Sbjct: 236 KLIEGKFPDYNRVIPRGGDKIVLADRATLKNTLQRAGILSHENIRGVRLNLASNELQVFA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NPD  +A +++ V Y    + I FN  YL+++++ +      +D+V   L + NSS  I
Sbjct: 296 NNPDQEQAEDALPVDYQGESLQIGFNVGYLVDVMNALD-----EDQVKITLSNPNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
             ++ +            YV+MPMR+
Sbjct: 351 EAQNDN---------RCLYVVMPMRL 367


>gi|239830848|ref|ZP_04679177.1| DNA polymerase III, beta subunit [Ochrobactrum intermedium LMG
           3301]
 gi|239823115|gb|EEQ94683.1| DNA polymerase III, beta subunit [Ochrobactrum intermedium LMG
           3301]
          Length = 385

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 243/387 (62%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS++L+ L H  R++ER+NTIP+  +VLLQA    L +KA+  ++E+  A  A 
Sbjct: 14  MRVTLERSNLLKSLNHVHRVVERRNTIPILSNVLLQAEGASLALKATDLDLEVNEATAAM 73

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++      + G  +++  G S+F LQ  P+S+FP 
Sbjct: 74  VEQAGATTVPAHLLYDIVRKLPDGAEVMLSTNPDGG-SMSVISGKSSFRLQCLPQSDFPE 132

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                + +SF + +  LK L++RT FA++TEE RYYLNGIFFH   ++  LKL AVATDG
Sbjct: 133 LTAGAFTHSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAVATDG 192

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  +    MP II+PRK V E+ +++   +  V V LS+++I   + S+ ++
Sbjct: 193 HRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPEVVVTVELSDAKIRFTVGSVVLT 252

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L +       +VDRVS +SS R +AVKLS++  +L +T
Sbjct: 253 SKLIDGTFPDYQRVIPSGNDKKLTIGRQEFAASVDRVSTISSERGRAVKLSIADGQLTLT 312

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y+  P+DI FN KYLL+I   +S       + VF L  + S   
Sbjct: 313 VNNPDSGSATDELAADYDADPLDIGFNSKYLLDITSQLSGS-----DAVFMLADAGSPTL 367

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R    +         +  YVLMPMR+
Sbjct: 368 VRDTGDE---------DVLYVLMPMRV 385


>gi|110632364|ref|YP_672572.1| DNA polymerase III subunit beta [Mesorhizobium sp. BNC1]
 gi|110283348|gb|ABG61407.1| DNA polymerase III, beta subunit [Chelativorans sp. BNC1]
          Length = 372

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 175/387 (45%), Positives = 251/387 (64%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ +ERS++L+ LGH  R++ER+NTIP+  +VLL A+   LE+KA+  ++E+T A PAS
Sbjct: 1   MRVVLERSNLLKSLGHVHRVVERRNTIPILSNVLLSADGASLEMKATDLDLEMTEAAPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++    + E G  +++  G S F LQ  P+++FP+
Sbjct: 61  VEQGGATTVPAHLLYDIVRKLPDGAEVMLKVD-ENGQTMSVISGRSTFRLQCLPKADFPA 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               ++ + F + S+VL++LVE+T FA++TEE RYYLNGIF H   ++  LKL AVATDG
Sbjct: 120 LTAGQFSHIFRMESAVLRSLVEKTQFAISTEETRYYLNGIFLHTLESDGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE++  A    MP IIVPRK VGE+ +++   D +V V LS+++I   I S+ ++
Sbjct: 180 HRLARAEIEAPAGSEGMPGIIVPRKTVGELQKLVDDPDVAVTVELSDTKIRFTIGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDKEL ++  +   AVDRVS +SS R +AVKLS+S  ++  T
Sbjct: 240 SKLIDGTFPDYQRVIPVGNDKELLIDRQSFSAAVDRVSTVSSERGRAVKLSISDGQVTFT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E +   YN  P++I FN +YLL++   +S       E  F L  + S   
Sbjct: 300 VNNPDSGSATEEIPAGYNADPIEIGFNARYLLDVAAQLSGS-----EAKFLLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+    +            YVLMPMR+
Sbjct: 355 IQDTSDERV---------LYVLMPMRV 372


>gi|217979804|ref|YP_002363951.1| DNA polymerase III subunit beta [Methylocella silvestris BL2]
 gi|217505180|gb|ACK52589.1| DNA polymerase III, beta subunit [Methylocella silvestris BL2]
          Length = 372

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 162/387 (41%), Positives = 236/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH  R++ER+NTIP+  +VLL+A    L +KA+  ++E+T  + A 
Sbjct: 1   MKVTLERAALLKSLGHVHRVVERRNTIPILSNVLLRAEGKSLLLKATDLDLEVTERLAAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V V G  T+ AH LYDIVRKL DG+Q+S     + G ++ +  G S F LQ+ P+S+FP 
Sbjct: 61  VGVAGGTTLPAHTLYDIVRKLPDGSQVSLEIAGDSG-QLLLRSGRSRFNLQTLPDSDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               ++ + F L  + LK L+E+T FA++ EE RYYLNGIF H    E    L AVATDG
Sbjct: 120 LAAGDFSHDFLLPPADLKRLIEKTQFAISNEETRYYLNGIFMHSMEAEGASVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+      + MP +IVPRKAV E+ +++    + ++V LS ++       + ++
Sbjct: 180 HRLARVEIACPKGASGMPGVIVPRKAVTEVQKLIEDLSADIRVELSTTKARFTFGDVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L V       AVDRVS +SS R +AVKL+++  KL ++
Sbjct: 240 TKLIDGTFPDYMRVIPAGNDKRLIVERGPFAAAVDRVSTISSERGRAVKLAIADGKLTLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E ++V Y+  P+DI FN +YLL+I + + S     D  +F+L    S   
Sbjct: 300 VTNPDSGSAQEELDVDYDSTPLDIGFNARYLLDITEQLDS-----DTALFKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           ++ +D           +A YVLMPMR+
Sbjct: 355 VQDRD---------GASALYVLMPMRV 372


>gi|323496928|ref|ZP_08101956.1| DNA polymerase III subunit beta [Vibrio sinaloensis DSM 21326]
 gi|323318002|gb|EGA70985.1| DNA polymerase III subunit beta [Vibrio sinaloensis DSM 21326]
          Length = 366

 Score =  281 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 220/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + T+P+  ++LL+  D +L + A+  E+E+   +   
Sbjct: 1   MKFSIERSHLLKPLQQVSGALGGRPTLPILGNLLLKVEDNVLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GS+TV +    DI R L D + I+F  E   G  V +  G S F L + P S+FP
Sbjct: 61  GEFEAGSVTVPSRKFLDICRGLPDDSVITFVLE---GDRVQVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L+ + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEISLSQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTQLGADFAQQ-QIIVPRKGVLELVKLMDAPEQPVTLQIGSSNLRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K L   C  LR A  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNTTKTLETGCDELRSAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++  P++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVSFDGEPIEIGFNVSYVLDVLNTLRC-----EKVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|37678196|ref|NP_932805.1| DNA polymerase III subunit beta [Vibrio vulnificus YJ016]
 gi|37196935|dbj|BAC92776.1| DNA polymerase III, beta chain [Vibrio vulnificus YJ016]
          Length = 366

 Score =  281 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ RS  ++ L      +  + T+P+  ++L+   +G L + A+  E+E+   +   
Sbjct: 1   MKFTIARSHFIKPLQQVSGALGGRPTLPILGNLLINVENGQLSMTATDLEVELISKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPSRKFLDICRGLPDDAVITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQGELRALIEKTQFSMANQDVRYYLNGMLFEI--DGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAPLSADFAQ-KQIIVPRKGVQELVKLLDTPEQPVTLQIGSSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTTKTLEASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++   ++I FN  Y+L++++ +       ++V   +  +N+S  +
Sbjct: 295 NNPEQEEAEEMLDVSFDGEAIEIGFNVSYVLDVLNTLRC-----EQVRISMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|307295044|ref|ZP_07574886.1| DNA polymerase III, beta subunit [Sphingobium chlorophenolicum L-1]
 gi|306879518|gb|EFN10736.1| DNA polymerase III, beta subunit [Sphingobium chlorophenolicum L-1]
          Length = 370

 Score =  281 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 237/387 (61%), Gaps = 19/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ L H   ++ER+NTIP+  +VL++A+ DG +++ A+  +++I  ++ A
Sbjct: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASSDGAIKLMATDLDLQIVESVSA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            V+  G+ T+SAH L+DI RKL +G+Q+S    +    ++ I  G + F L + P  +FP
Sbjct: 61  QVEQAGATTISAHTLFDIARKLPEGSQVSL---HAAEGKMLIQAGRARFNLSTLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKL-CAVATDG 178
              E +   SFEL +  LK ++++T FA++TEE RYYLNGI+FH++++   +  A ATDG
Sbjct: 118 VIAEGDLPTSFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSDDGQPVLKAAATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   V        MP IIVPRK +GE+ ++L   + SV++SLS S+I   + S  ++
Sbjct: 178 HRLARVTVPRPDGADGMPGIIVPRKCIGELRKLLDEVEGSVQISLSASKIRFGLGSAILT 237

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDK L+++  +  + VDRV+ +++ + +AVK++L  DK+ ++
Sbjct: 238 SKLIDGTFPDYSRVIPTANDKLLKIDPRSFEEGVDRVATIATEKTRAVKMTLDRDKITLS 297

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V +P+ G A E +   +     DI FN +YLL+I+  I S     D V   L  + +   
Sbjct: 298 VTSPENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDS-----DLVELHLADAAAPTL 352

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D+           A YVLMPMR+
Sbjct: 353 IREDDRSP---------ALYVLMPMRV 370


>gi|319779751|ref|YP_004139227.1| DNA polymerase III, subunit beta [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165639|gb|ADV09177.1| DNA polymerase III, beta subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 372

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 169/387 (43%), Positives = 244/387 (63%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ +ERS++L+ L H  R++ER+NTIP+  +VLL A    LE+KA+  ++E+T A PA 
Sbjct: 1   MRVILERSNLLKSLNHVHRVVERRNTIPILSNVLLGAEGASLEMKATDLDLEVTEATPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AHLLYDIVRKL DGA++    + E G  + ++ G S+F LQ  P+S+FP 
Sbjct: 61  VERGGATTVPAHLLYDIVRKLADGAEVMLKTD-EDGNAMTVTSGRSSFRLQCLPQSDFPE 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
                + + F L S  LK L+E+T FA++TEE RYYLNGI+ H +E    LKL +VATDG
Sbjct: 120 LSAGSFSHIFRLDSVALKGLIEKTQFAISTEETRYYLNGIYLHTHEVGGKLKLRSVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA AE+D  A    MP II+PRK V E+ +++   D +V   LS+++I   I S+ ++
Sbjct: 180 HRLARAEIDAPAGSEGMPGIIIPRKTVSELQKLVDDPDVAVTTELSDTKIRFTIGSVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+YQ VIP  NDK+L ++  +   AVDRVS +SS R +AVKLS+S  ++ + 
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKKLIIDRQSFAAAVDRVSTISSERGRAVKLSISEGQVTLA 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A E ++  Y+  P++I FN KYLL++   ++       E  F L  + S   
Sbjct: 300 VNNPDSGSATEELSADYSSDPIEIGFNAKYLLDVAAQLTGT-----EAKFMLADAGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I     ++         A YVLMPMR+
Sbjct: 355 IHDMADET---------ALYVLMPMRV 372


>gi|56695075|ref|YP_165422.1| DNA polymerase III subunit beta [Ruegeria pomeroyi DSS-3]
 gi|56676812|gb|AAV93478.1| DNA polymerase III, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 372

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 233/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A     + +A+  +IE+    PA 
Sbjct: 1   MKISIERGALLKAVAQAQSVVERRNTIPILANVLIEAEGEGAQFRATDLDIEVVDKAPAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ TVSA  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  IERAGATTVSATTLHEIVRKLPDGALVTLTADAAAG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F   ++VL+ L +++ FA++TEE RYYLNG++ H+ + D    L  VATDG
Sbjct: 120 MASSEYQSNFTANAAVLRRLFDKSKFAISTEETRYYLNGVYMHVADGDGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+ A    MP +IVPRK VGE+ ++L   +  + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPAGATDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N + L V+ +   +AVDRV+ +SS R +AVKL L  DKL ++
Sbjct: 240 SKVIDGTFPDYTRVIPQANTRRLEVDASEFAKAVDRVATVSSERSRAVKLQLDEDKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y++  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYSDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDQSAVYVVMPMRV 372


>gi|284923784|emb|CBG36882.1| DNA polymerase III beta-subunit [Escherichia coli 042]
          Length = 366

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QSHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|182679952|ref|YP_001834098.1| DNA polymerase III subunit beta [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635835|gb|ACB96609.1| DNA polymerase III, beta subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 371

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 159/387 (41%), Positives = 231/387 (59%), Gaps = 18/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH  R++ER+NTIP+  +VLL ++   L +KA+  ++E+T  + A 
Sbjct: 1   MKVTLERAALLKALGHVHRVVERRNTIPILSNVLLHSDGDGLLLKATDLDLEVTERLTAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G  T+ AH+LYDIVRKL DG+Q     E      + +  G S F LQS PES+FP 
Sbjct: 61  TGTQGGTTLPAHILYDIVRKLPDGSQ--ISLETTEAGPLQLRSGRSRFTLQSLPESDFPD 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
                +  +F L +  LK L+++T FA+++EE RYYLNGIF H  E    + L AVATDG
Sbjct: 119 LAAGTFEQTFTLKAGDLKRLIDKTQFAISSEETRYYLNGIFMHTTEVEGHVMLRAVATDG 178

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+      + MP II+PRK V E+ +++  +   VK+ +S ++I      + ++
Sbjct: 179 HRLARVEIPAPQGASGMPGIIIPRKTVAEVQKLVEDQAQEVKLEVSPTKIRFTFGEVVLT 238

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L V+    + AVDRVS +SS R +AVKL+L+  KL ++
Sbjct: 239 SKLIDGTFPDYARVIPSGNDKFLTVDRGPFQDAVDRVSTISSERGRAVKLALAEGKLTLS 298

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A+E + V Y+  P+DI FN +YLL+I   + S     D  +F+     S   
Sbjct: 299 VTNPDSGSAVEELEVDYDAAPIDIGFNARYLLDIAAQLDS-----DTALFKFADPGSPTL 353

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  +D           +A YVLMPMR+
Sbjct: 354 VLDRD---------GASALYVLMPMRV 371


>gi|307543591|ref|YP_003896070.1| DNA polymerase III subunit beta [Halomonas elongata DSM 2581]
 gi|307215615|emb|CBV40885.1| DNA polymerase III subunit beta [Halomonas elongata DSM 2581]
          Length = 367

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 202/386 (52%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITG-AIPA 59
           MK ++ R  +L  L     ++ER+ T+PV  +VL+Q     + +  +  E+E+ G  + +
Sbjct: 1   MKFSISREALLRPLTLVAGVVERRQTLPVLSNVLIQVEQDQVSLTGTDLEVELIGRTVAS 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  GS TV A  L DI + L D A+I    E+       +  G S F L + P +EFP
Sbjct: 61  QVDEAGSATVPARKLMDICKSLPDQAEIQLALEDN---RAVLRSGRSRFTLSTLPVAEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    LK L++ T FAMA +++RYYLNG+          + AVATDGH
Sbjct: 118 NIEDGQSSVELSLPRGTLKRLIDATSFAMAQQDVRYYLNGMLLEFGTN--LVRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAVA      Q+     +IVPRK + E++R+L   +  V ++L  + I  +    + + 
Sbjct: 176 RLAVASRSAEIQVEPSQKLIVPRKGIMELVRLLDDGEDPVSLTLGSTHIRAHTGDFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK L    T LRQ + R +I+S+ + + V+L+L    L +  
Sbjct: 236 KLVDGKFPDYERVVPKGGDKVLIAERTELRQVLSRTAILSNEKYRGVRLNLEEGNLRVMA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E++ V Y    M+I FN  YL++++  +      +D V   L   NSS  +
Sbjct: 296 NNPEQEEAEENVGVEYTGPAMEIGFNVGYLVDVLSVLD-----EDRVQLTLADPNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +A YV+MPMR+
Sbjct: 351 EEP---------GGGDALYVVMPMRL 367


>gi|260774982|ref|ZP_05883882.1| DNA polymerase III beta subunit [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609072|gb|EEX35231.1| DNA polymerase III beta subunit [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 366

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 218/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER+ +L+ L      +  + T+P+  ++LL+  D +L + A+  E+E+   +   
Sbjct: 1   MKFSIERNHLLKPLQQVSGALGGRPTLPILGNLLLKVEDNMLSMTATDLEVELISRVALE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GS+TV +    DI R L D + I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSVTVPSRKFLDICRGLPDDSVITFVLE---GDRVQVRSGRSRFSLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQGELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++V + A  A+   IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQVQLGADFAQQ-QIIVPRKGVLELVKLLDAPEQPVTLQIGSSNVRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K L   C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQTTTKTLEAECDELRQAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVSFEGDPIEIGFNVSYVLDVLNTLRC-----EKVRVSMSDANASAMI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D D          A YV+MP+R+
Sbjct: 350 ENVDDD---------GAMYVVMPIRL 366


>gi|54307246|ref|YP_128266.1| DNA polymerase III subunit beta [Photobacterium profundum SS9]
 gi|46911666|emb|CAG18464.1| Putative DNA polymerase III, beta chain [Photobacterium profundum
           SS9]
          Length = 366

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + ++P+  ++LL+  +G L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGALGGRPSLPILGNILLKVEEGYLSMTGTDLEVELIAKLALE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G++TV +    DI R L DGA+I+   E   G  + I  G S + L + P ++FP
Sbjct: 61  ADFEVGAVTVPSRKFLDICRGLPDGAKIAVTLE---GDRILIRSGRSRYSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F L    +  L++ T F+MA +++RYYLNG+ F    +   L +VATDGH
Sbjct: 118 NIEDWQSDVEFTLPQGRMSQLIQSTQFSMAHQDVRYYLNGMLFE--TDGSHLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  +D+  ++     IIVPRK V E++R+L + ++ V + +  S I   + +   + 
Sbjct: 176 RMAVCAIDLAQELT-TKQIIVPRKGVLELVRLLDNAEAMVDIQIGNSNIRATVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S++K +  +C  LR+A  R +I+S+ + + V+++LS  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSSNKFVEASCDELRKAFSRAAILSNEKFRGVRVNLSKGEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       D+V   L  +N+S  +
Sbjct: 295 NNPEQEEAEEFLDVDYQGDDLEIGFNVSYVLDVLNTLKC-----DQVRLSLTDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D          A YV+MP+R+
Sbjct: 350 EDCANDE---------AMYVVMPIRL 366


>gi|90421530|ref|YP_529900.1| DNA polymerase III subunit beta [Rhodopseudomonas palustris BisB18]
 gi|90103544|gb|ABD85581.1| DNA polymerase III, beta subunit [Rhodopseudomonas palustris
           BisB18]
          Length = 372

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 168/387 (43%), Positives = 238/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VLL+A  G L +KA+  ++E+T  +PA 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLLRAEKGRLSLKATDLDLEVTETLPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS TV AH+ YDIVRKL DG+QI    + E    + I  G S F LQ+ PE++FP 
Sbjct: 61  TATGGSTTVPAHMFYDIVRKLPDGSQIVLESDGERAV-LAIRAGRSRFTLQTLPENDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               E  +SF L ++ +K L++RT FA++TEE RYYLNGI+ H         L AVATDG
Sbjct: 120 LAAGEMTHSFTLTAADVKRLIDRTQFAISTEETRYYLNGIYLHGAGTAAAATLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ + +  A MP +IVPRK VGE+ R++   +++V + LS  +I   +  + ++
Sbjct: 180 HRLAQVDLPLPSGAAGMPGVIVPRKTVGEVQRLIEDTEAAVGIELSVGKIRFTLGDVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EVAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           ++ +D            A YVLMPMR+
Sbjct: 355 VQDRD---------AKGALYVLMPMRV 372


>gi|261250638|ref|ZP_05943213.1| DNA polymerase III beta subunit [Vibrio orientalis CIP 102891]
 gi|260939207|gb|EEX95194.1| DNA polymerase III beta subunit [Vibrio orientalis CIP 102891]
          Length = 366

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 217/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + T+P+  ++LL+  D +L + A+  E+E+   +   
Sbjct: 1   MKFSIERSHLLKPLQQVSGALGGRPTLPILGNLLLKVEDNVLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV +    DI R L D + I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPSRKFLDICRGLPDDSVITFVLE---GDRVQVRSGRSRFSLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ LVE+T F+MA +++RYYLNG+ F I  E   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQAELRGLVEKTQFSMANQDVRYYLNGMLFEI--EGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGSSNVRAEVNNYVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S  K L   C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSTSKTLETGCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       + V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVSFEGEPIEIGFNVSYVLDVLNTLRC-----ETVRISMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                DS         A YV+MP+R+
Sbjct: 350 ENAADDS---------AMYVVMPIRL 366


>gi|126724506|ref|ZP_01740349.1| DNA polymerase III subunit beta [Rhodobacterales bacterium
           HTCC2150]
 gi|126705670|gb|EBA04760.1| DNA polymerase III subunit beta [Rhodobacterales bacterium
           HTCC2150]
          Length = 372

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 151/387 (39%), Positives = 231/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +G A  ++ER+NTIP+  +VL++A+   +  +A+  +IE+     A 
Sbjct: 1   MKISIERATLLKAVGQAQSVVERRNTIPILANVLIEADANSVSFRATDLDIEVVDKTVAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           VD  G+ TVSA  L++IVRKL DGA +    +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VDRPGATTVSAVTLHEIVRKLPDGALVQLTDDGSSG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               EY  +F + S VL+ L +++ FA++TEE RYYLNG++ H++  +    L  VATDG
Sbjct: 120 MANAEYGANFSIESKVLRRLFDKSKFAISTEETRYYLNGVYMHVSDADGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  + D+ A    MP +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDADLPAGAETMPGVIVPRKTVGELRKLLDDDDVKIAVSVSETKVRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRRLEVDAAEFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDDRLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N   A YV+MPMR+
Sbjct: 355 MR---------EGNDTTAVYVVMPMRV 372


>gi|317494668|ref|ZP_07953080.1| DNA polymerase III [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917270|gb|EFV38617.1| DNA polymerase III [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 366

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +P A
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVEDGHLLLTGTDLEMEMIARVPLA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L DGA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QEHETGATTVPARKFFDICRGLPDGAEITVVLD---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKKLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E+ R+L   ++ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGQSVPSH-SVIVPRKGVMELSRLLDGGETPLRLQIGSNNIRAHVGGFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L+  C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLKAGCDELKQAFARAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVNYEGTDLEIGFNVSYVLDVLNALKC-----EDVHMLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|94495788|ref|ZP_01302367.1| DNA polymerase III, beta subunit [Sphingomonas sp. SKA58]
 gi|94424480|gb|EAT09502.1| DNA polymerase III, beta subunit [Sphingomonas sp. SKA58]
          Length = 370

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 148/387 (38%), Positives = 232/387 (59%), Gaps = 19/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ L H   ++ER+NTIP+  +VL++A+ DG +++ A+  ++++  +I A
Sbjct: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQVVESISA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            V+  G+ T+SAH L+DI RKL +G+Q+S         ++ I  G + F L + P  +FP
Sbjct: 61  QVEQPGATTISAHTLFDIARKLPEGSQVSL---QAADGKMLIQAGRARFNLSTLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKL-CAVATDG 178
              E +    FEL +  LK ++++T FA++TEE RYYLNGI+FH++EE   +  A ATDG
Sbjct: 118 VIAEGDLPTQFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSEEGQPVLKAAATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   V        MP IIVPRK +GE+ ++L   + SV++SLS S+I   + S  ++
Sbjct: 178 HRLARVTVPRPDGADGMPGIIVPRKCIGELRKLLDEVEGSVQISLSASKIRFGLGSAILT 237

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L+++  +    VDRV+ +++ + +AVK++L  D++ ++
Sbjct: 238 SKLIDGTFPDYSRVIPTGNDKLLKIDPRSFEDGVDRVATIATEKTRAVKMTLDKDRITLS 297

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V +P+ G A E +   +     DI FN +YLL+I+  I S     D V   L  + +   
Sbjct: 298 VTSPENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDS-----DLVELHLADAAAPTL 352

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D            A YVLMPMR+
Sbjct: 353 IRENDASP---------ALYVLMPMRV 370


>gi|254451638|ref|ZP_05065075.1| DNA polymerase III, beta subunit [Octadecabacter antarcticus 238]
 gi|198266044|gb|EDY90314.1| DNA polymerase III, beta subunit [Octadecabacter antarcticus 238]
          Length = 372

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 142/387 (36%), Positives = 230/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER+ +L+ +  A  ++ER+NTIP+  +VL++A+      +A+  +IE+     A 
Sbjct: 1   MKLSIERASLLKAVAQAQSVVERRNTIPILANVLIEASGAEATFRATDLDIEVVDKATAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  GS TVSA  L +IVRKL DGA ++  +++  G  + I  G SNF L + P+ +FP 
Sbjct: 61  VERAGSTTVSAVTLNEIVRKLPDGALVTLTEDSASG-RLTIEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               +Y  +F   + VL+ L +++ FA++TEE RYYLNG++ H   ++    L  VATDG
Sbjct: 120 MASSDYATNFSCPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVSESDGGKVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      M  +IVPRK VGE+ ++L   +  + VS+SE+++      ++++
Sbjct: 180 HRLARIDAALPEGADGMAGVIVPRKTVGELRKLLDDDEMMIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +N +++ V+     +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQNNTRKMEVDAAEFARAVDRVATVSSERSRAVKLQLDEDRLILS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E ++V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELSVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAIYVVMPMRV 372


>gi|126730157|ref|ZP_01745969.1| DNA polymerase III subunit beta [Sagittula stellata E-37]
 gi|126709537|gb|EBA08591.1| DNA polymerase III subunit beta [Sagittula stellata E-37]
          Length = 372

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 149/387 (38%), Positives = 230/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L  +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+     A 
Sbjct: 1   MKISMERATLLRAVAQAQSVVERRNTIPILANVLIEAEGETVTFRATDLDIEVLDKAEAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G  TVSA  L++IVRKL DGA +   +E   G  + +S G SNF L + P+ +FP 
Sbjct: 61  VEKPGGTTVSAVTLHEIVRKLPDGALVVLAEEPGTG-RLTVSAGRSNFNLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               EY  +F   + VL+ L +++ FA++TEE RYYLNG++ H+ + D    L  VATDG
Sbjct: 120 MASSEYGSNFTAKAEVLRRLFDKSKFAISTEETRYYLNGVYMHVADGDGGQALRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +    A MP +IVPRK VGE+ ++L   D  + VS+SE+++      ++++
Sbjct: 180 HRLARIDAPLPDGAADMPGVIVPRKTVGEMRKLLDEDDMDIAVSVSETKVRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N ++L V+ +   +AVDRV+ +SS R +AVKL L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPQGNTRKLEVDASEFAKAVDRVATVSSERSRAVKLQLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|85713965|ref|ZP_01044954.1| DNA polymerase III subunit beta [Nitrobacter sp. Nb-311A]
 gi|85699091|gb|EAQ36959.1| DNA polymerase III subunit beta [Nitrobacter sp. Nb-311A]
          Length = 372

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 159/387 (41%), Positives = 233/387 (60%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ L H  R++ER+NTIP+  +VL++A +  L +KA+  ++E+T  + A 
Sbjct: 1   MKVTVERAQLLKSLSHVHRVVERRNTIPILGNVLVRAENAKLSLKATDLDLEVTETLSAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS +V AH+ YDIVRKL +GAQI    + +    + I  G S F LQ+ PE++FP 
Sbjct: 61  TGTIGSTSVPAHMFYDIVRKLPEGAQILLEGDGDRSV-LAIRAGRSRFTLQTLPENDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCA--VATDG 178
               E  ++F LA++ LK L++RT FA++TEE RYYLNGI+ H            VATDG
Sbjct: 120 LAAGEMTHAFTLAAADLKRLIDRTQFAISTEETRYYLNGIYLHGAGNAKSATLRGVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++ +      MP +I+PRK VGE+ R++   ++ + + LS+ +I   I ++ ++
Sbjct: 180 HRLAQLDLALPKGAEGMPGVIIPRKTVGEVQRLIEDSEAEIGIELSQGKIRFTIGNVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS+ KL ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELVVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V +L    S   
Sbjct: 300 VTNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEG-----EAAVLKLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  +D            A YVLMPMR+
Sbjct: 355 VHDRD---------SRGALYVLMPMRV 372


>gi|294675559|ref|YP_003576174.1| DNA polymerase III subunit beta [Rhodobacter capsulatus SB 1003]
 gi|294474379|gb|ADE83767.1| DNA polymerase III, beta subunit [Rhodobacter capsulatus SB 1003]
          Length = 372

 Score =  279 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 145/387 (37%), Positives = 230/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSTVSFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA +L++IVRKL DG+ +    +   G  +++  G S+F L + P  +FP 
Sbjct: 61  VERAGATTVSAVMLHEIVRKLPDGSLVQLSDDAAAG-RLSVMAGRSSFNLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               EY  +F   + VLK L +++ FA++TEE RYYLNG++ H+   E+   L  VATDG
Sbjct: 120 MASSEYTANFAAKAGVLKRLFDKSKFAISTEETRYYLNGVYMHVATGEDGPALRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      MP +IVPRK V E+ ++L   ++ + VS+SE+++      ++++
Sbjct: 180 HRLARIDAVLPEGANGMPGVIVPRKTVNELRKLLDDDEAQIAVSVSETKVRFATPEITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKLSL  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPMGNTRRLEVDAAEFAKAVDRVATVSSERSRAVKLSLDEDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDAGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         + N  +A YV+MPMR+
Sbjct: 355 MR---------EGNDTSAVYVVMPMRV 372


>gi|288959567|ref|YP_003449908.1| DNA polymerase III subunit beta [Azospirillum sp. B510]
 gi|288911875|dbj|BAI73364.1| DNA polymerase III subunit beta [Azospirillum sp. B510]
          Length = 376

 Score =  279 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 150/391 (38%), Positives = 226/391 (57%), Gaps = 21/391 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M IT+ER+ +L  LGH   ++ER+NTIP+  +VLL+A DG L + A+  ++EI   +PA+
Sbjct: 1   MNITIERAALLRSLGHVQSVVERRNTIPILSNVLLRAGDGELSLAATDMDLEIVETVPAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G  T  AH L+DIVRKL DG+Q+        GT + +  G S F L   P  +FP 
Sbjct: 61  VGRPGGTTAPAHTLFDIVRKLPDGSQVELDI-GGDGTILTLRAGRSQFKLSCLPVEDFPQ 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE------EDLKLCAV 174
               +  ++F + ++ L+ L++RT FA++TEE RYYLNGI+ H  +      E   L AV
Sbjct: 120 LSSGDLKHNFSVPAADLRGLIDRTRFAISTEETRYYLNGIYLHAAKSKMGGLETPVLRAV 179

Query: 175 ATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           ATDGHRLA  E+ +      +P +I+PRK V EI +++      +++S+S+++I    +S
Sbjct: 180 ATDGHRLARVEMPLPDGAEGIPGVIIPRKTVTEIRKLVDEAADRIELSMSDNKIRFGFDS 239

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + ++ +LIDG FP+Y+ VIP  NDK + V+      AVDRV+ +S+ + +AVKLSL    
Sbjct: 240 VVVTSKLIDGTFPDYERVIPVGNDKVMEVDAKLFAAAVDRVATISTEKSRAVKLSLVRGA 299

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  +P+ G A E + V Y E P++I FN +YLL+I   I       +   F L  + 
Sbjct: 300 LTLSATSPESGSATEELEVNYAEAPLEIGFNSRYLLDITQQIEG-----EGAQFTLADAA 354

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           S   IR     +         A YVLMPMR+
Sbjct: 355 SPTIIRDVADST---------ALYVLMPMRV 376


>gi|215489041|ref|YP_002331472.1| DNA polymerase III subunit beta [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312967889|ref|ZP_07782101.1| DNA polymerase III, beta subunit [Escherichia coli 2362-75]
 gi|215267113|emb|CAS11560.1| DNA polymerase III, beta subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312287450|gb|EFR15358.1| DNA polymerase III, beta subunit [Escherichia coli 2362-75]
          Length = 366

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPMRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|320157815|ref|YP_004190194.1| DNA polymerase III subunit beta [Vibrio vulnificus MO6-24/O]
 gi|319933127|gb|ADV87991.1| DNA polymerase III beta subunit [Vibrio vulnificus MO6-24/O]
          Length = 366

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ RS  ++ L      +  + T+P+  ++L+   +G L + A+  E+E+   +   
Sbjct: 1   MKFTIARSHFIKPLQQVSGALGGRPTLPILGNLLINVENGQLSMTATDLEVELISKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPSRKFLDICRGLPDDAVITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    L+ L+E+T F+MA +++RYYLNG+ F I  E   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQGELRALIEKTQFSMANQDVRYYLNGMLFEI--EGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAALSADFAQ-KQIIVPRKGVQELVKLLDTPEQPVTLQIGSSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTTKTLEASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       ++V   +  +N+S  +
Sbjct: 295 NNPEQEEAEEMLDVSFEGEAIEIGFNVSYVLDVLNTLRC-----EQVRISMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|103486201|ref|YP_615762.1| DNA polymerase III subunit beta [Sphingopyxis alaskensis RB2256]
 gi|98976278|gb|ABF52429.1| DNA polymerase III, beta subunit [Sphingopyxis alaskensis RB2256]
          Length = 371

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 153/388 (39%), Positives = 234/388 (60%), Gaps = 20/388 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAND-GLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ LGH   ++ER+NTIP+  +VL++A+  G L + A+  ++++   I A
Sbjct: 1   MKATIERAVLLKSLGHVQSVVERRNTIPILSNVLIEADGTGQLRLMATDLDLQVVETIAA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            V+  G+ TVSAH L++I RKL +G+++S         +V +  G SNF L + P  +FP
Sbjct: 61  KVETPGTTTVSAHTLFEIARKLPEGSEVSLAA---AEGKVQVKAGRSNFNLPTLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATD 177
              E +   +FEL  + L  ++++T FA++TEE RYYLNGIF H+ E+     L A ATD
Sbjct: 118 VIAEGDLPTNFELPVAELIQIIDKTRFAISTEETRYYLNGIFLHVAEDATGPVLKAAATD 177

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA   V      A MP +IVPRK VGEI ++L   + +V++SLS S+I   + +  +
Sbjct: 178 GHRLARYTVTRPDGAAGMPDVIVPRKCVGEIRKLLDEAEGNVEISLSASKIRFQLGNAVL 237

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP+Y  VIP +NDK L+V+  +L Q VDRVS ++S + +AVK+ L  D++ +
Sbjct: 238 TSKLIDGTFPDYSRVIPTANDKLLKVDPKSLFQGVDRVSTIASEKTRAVKVGLDKDRITL 297

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V +P+ G A E +   Y+   M+I FN +YL +I+  +       D V   L  +N+  
Sbjct: 298 SVTSPENGTAAEELAAAYDSDAMEIGFNARYLSDILGQVDG-----DSVELHLADANAPT 352

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            IR  +K           A YVLMPMR+
Sbjct: 353 LIRESEKSP---------ALYVLMPMRV 371


>gi|114769643|ref|ZP_01447253.1| DNA polymerase III subunit beta [alpha proteobacterium HTCC2255]
 gi|114549348|gb|EAU52230.1| DNA polymerase III subunit beta [alpha proteobacterium HTCC2255]
          Length = 372

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 144/387 (37%), Positives = 226/387 (58%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ERS +L+ +  A  ++ER+NTIP+  +VL++A  G +  +A+  +IE+   +   
Sbjct: 1   MKVSIERSALLKAMSQAQSVVERRNTIPILANVLIEAEGGEISFRATDLDIEVVYKVVGM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AH L++IVRKL DGA +    +      +++  G S+F L + P  +FP 
Sbjct: 61  VERAGATTVGAHTLHEIVRKLPDGAMVELTDDATAN-RLDVVAGRSSFSLATLPREDFPI 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   S  L+ L +++ FA++TEE RYYLNG++ H ++      L  VATDG
Sbjct: 120 MANSEYACNFSAQSETLRRLFDKSKFAISTEETRYYLNGVYMHSSDGENGRVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      +P +IVPRK VGE+ ++L   +  + VS+SE++I  +   + ++
Sbjct: 180 HRLARIDTQLPEGADTLPGVIVPRKTVGELRKLLDDDEMKIAVSVSETKIRFSTPEIILT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     QAVDRVS +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGSFPDYTRVIPQGNTRRLEVDAAEFAQAVDRVSTVSSERSRAVKLTLEDDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELVVAYADERLEIGFNAKYLLEIAGQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R  + +S         A YV+MPMR+
Sbjct: 355 MREGNDES---------AVYVVMPMRV 372


>gi|193069140|ref|ZP_03050097.1| DNA polymerase III, beta subunit [Escherichia coli E110019]
 gi|192957464|gb|EDV87910.1| DNA polymerase III, beta subunit [Escherichia coli E110019]
          Length = 366

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPISQSLPSH-SVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|326793324|ref|YP_004311144.1| DNA polymerase III subunit beta [Marinomonas mediterranea MMB-1]
 gi|326544088|gb|ADZ89308.1| DNA polymerase III, beta subunit [Marinomonas mediterranea MMB-1]
          Length = 365

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 133/385 (34%), Positives = 214/385 (55%), Gaps = 20/385 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +V R  +L+ L     ++ERK T+PV  +VL++  D +L +  S  E+E+ G +P  
Sbjct: 1   MKFSVVRETLLKPLQLVAGVVERKQTMPVLANVLVEVKDQVLTLTGSDLEVELVGQVPLD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G ITV A  L DI + L D A I F  + +   +  I  G S F L + P  EFP+
Sbjct: 61  DCQEGRITVPARKLVDICKSLPDSAVIEFSLDEQ---KAIIRSGRSRFSLSTLPADEFPN 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            ++ +   +  +A S ++ L++RT FAMA +++RYYLNG+ F + +   +L  VATDGHR
Sbjct: 118 IQDMQGDLTVNVAQSSVRRLIDRTGFAMANQDVRYYLNGMLFEVADG--QLRVVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA A ++       +  +IVPRK V E+ R+LS  D  V++ +  + +   I+  + + +
Sbjct: 176 LATA-IEDAQVSGDLTQVIVPRKGVLELNRLLSDTDELVELKIGSNHVRATIDDYTFTSK 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L+DG+FP+Y  VIP +N+K +  +   LRQ   R SI+S+ + + V+L LS+  L +  +
Sbjct: 235 LVDGKFPDYHRVIPRNNEKMVIADRQELRQVFLRASILSNEKYRGVRLILSNGMLQVFAN 294

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A ES+ V Y    M++ FN  YLL+++  + +      EV   ++ SNSS  I 
Sbjct: 295 NPEQEEAEESVLVQYQGDGMEVGFNVGYLLDVLGVVDAQ-----EVRIAMNDSNSSALIE 349

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                    +     A YV+MPMR+
Sbjct: 350 ---------EAQSHAAQYVVMPMRL 365


>gi|149912067|ref|ZP_01900658.1| DNA polymerase III subunit beta [Moritella sp. PE36]
 gi|149804863|gb|EDM64900.1| DNA polymerase III subunit beta [Moritella sp. PE36]
          Length = 366

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L  L      +  + T+P+  +VLL A +G L +  +  E+E+ G +   
Sbjct: 1   MQFTINREALLRPLQLVSGALGNRPTLPILGNVLLDAKEGKLTLTGTDLEVELIGQVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  TV A  L DI R L D AQI           + +  G S F L + P +EFP
Sbjct: 61  GEFTEGRTTVPAKKLLDICRGLPDSAQIQVS---YANDRIVVKSGRSRFSLSTLPATEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    FEL    L+ L++ T F+MA++++RYYLNG+ F        L  VATDGH
Sbjct: 118 NIEDWDNDIEFELLQGSLRRLIDNTQFSMASQDVRYYLNGMLFETEGNI--LRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAVA  +  A + K   +IVPRK V E++R+L S++  VK+ L  + I         + 
Sbjct: 176 RLAVASCEHDANL-KQQQVIVPRKGVLELVRLLDSEEDMVKIQLGSNNIRAITSGFVFTC 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +   L+QA  R +I+S+ + + V+L+++   L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNADKMLISSREELKQAFSRAAILSNEKFRGVRLNMNQGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       +++   L  +NSS  I
Sbjct: 295 NNPEQEEAEELLDVAFAHDELEISFNVSYVLDVLNTLKC-----EKIKISLSDANSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
             +  D          A YV+MPMR+
Sbjct: 350 EDEQSDQ---------ALYVVMPMRL 366


>gi|152994045|ref|YP_001338880.1| DNA polymerase III subunit beta [Marinomonas sp. MWYL1]
 gi|150834969|gb|ABR68945.1| DNA polymerase III, beta subunit [Marinomonas sp. MWYL1]
          Length = 365

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 134/385 (34%), Positives = 213/385 (55%), Gaps = 20/385 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +V R  +L+ L     ++ERK T+PV  +VL++  D LL +  S  E+E+ G +P  
Sbjct: 1   MKFSVVRETLLKPLQLVAGVVERKQTMPVLANVLVEVKDQLLTLTGSDLEVELVGHVPLD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G ITV A  L DI + L D A I F  +++   +  I  G S F L + P  EFP+
Sbjct: 61  ECEEGRITVPARKLMDICKSLPDSAVIEFTLDDQ---KAVIRSGRSRFSLSTLPADEFPN 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            ++ +   +  +A + ++ L++RT FAMA +++RYYLNG+   + +   +L  VATDGHR
Sbjct: 118 IQDMQGDLTVSIAQNSVRRLIDRTGFAMANQDVRYYLNGMLLEVADG--QLRVVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA A V+       +  +IVPRK V E+ R+L+  D  V++++  + I   +     + +
Sbjct: 176 LATA-VEDAQVSGDLTQVIVPRKGVLELNRLLNDTDEVVELTIGTNHIRAKVAEYVFTSK 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L+DG+FP+Y  VIP +N+K +  +   LRQ   R SI+S+ + + V+L LS+  L +  +
Sbjct: 235 LVDGKFPDYHRVIPRNNEKIVIADRLELRQVFLRASILSNEKYRGVRLILSNGMLQVFAN 294

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A ES+ V Y    M++ FN  YLL+++  + S      EV   L+ SNSS  I 
Sbjct: 295 NPEQEEAEESVLVQYQGDNMEVGFNVGYLLDVLGVVDSQ-----EVRLSLNDSNSSALIE 349

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                    +     A YV+MPMR+
Sbjct: 350 ---------EAQSHAAQYVVMPMRL 365


>gi|87121028|ref|ZP_01076920.1| DNA polymerase III, beta chain [Marinomonas sp. MED121]
 gi|86163866|gb|EAQ65139.1| DNA polymerase III, beta chain [Marinomonas sp. MED121]
          Length = 365

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 20/385 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +V R  +L+ L     ++ERK T+PV  +VLL+  D  L +  S  E+E+ G I   
Sbjct: 1   MKFSVVRETLLKPLQLVAGVVERKQTMPVLANVLLEVKDNELTLTGSDLEVELVGHIQLD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G ITV A  L DI + L D A I    ++   T   I  G S F L + P  EFP+
Sbjct: 61  ECQEGRITVPARKLMDICKSLPDSAVIELSVDD---TRAIIRSGRSRFTLSTLPADEFPN 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            ++ +   S  +A + ++ L+ERT FAMA +++RYYLNG+ F + +   +L  V+TDGHR
Sbjct: 118 IQDMQGDLSVVVAQNSVRRLIERTGFAMANQDVRYYLNGMLFEVADG--QLRVVSTDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA A ++       +  +IVPRK V E+ R+LS  D +V++ +  + I   +     + +
Sbjct: 176 LATA-IEDAQVSGDLTQVIVPRKGVLELNRLLSDTDETVELQIGANHIRAKVADYIFTSK 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L++G+FP+Y  VIP +NDK +  +   LRQ   R SI+S+ + + V+L L++  L +  +
Sbjct: 235 LVEGKFPDYHRVIPRNNDKIVIADRLELRQVFLRASILSNEKYRGVRLILTNGMLQVFAN 294

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A ES+ V Y    +++ FN  YLL+++  ++S      EV   L+ + +S  + 
Sbjct: 295 NPEQEEAEESVLVQYQGDDLEVGFNVSYLLDVLGVVNSQ-----EVRISLNDATASALVE 349

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             D  +           YV+MPMR+
Sbjct: 350 EADSHAAQ---------YVVMPMRL 365


>gi|28896786|ref|NP_796391.1| DNA polymerase III subunit beta [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260363485|ref|ZP_05776318.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus K5030]
 gi|260876544|ref|ZP_05888899.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus AN-5034]
 gi|260901415|ref|ZP_05909810.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus AQ4037]
 gi|28804994|dbj|BAC58275.1| DNA polymerase III, beta chain [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308090394|gb|EFO40089.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus AN-5034]
 gi|308107195|gb|EFO44735.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus AQ4037]
 gi|308113560|gb|EFO51100.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus K5030]
 gi|328471239|gb|EGF42141.1| DNA polymerase III subunit beta [Vibrio parahaemolyticus 10329]
          Length = 366

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 221/386 (57%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++L++  + +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEENVLSMTATDLEVELVSKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDAIITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L+ + L+ L+++T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   +K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVTFEGDPIEIGFNVSYVLDVLNTLRC-----EKVQVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|27364432|ref|NP_759960.1| DNA polymerase III subunit beta [Vibrio vulnificus CMCP6]
 gi|27360551|gb|AAO09487.1| DNA polymerase III, beta subunit [Vibrio vulnificus CMCP6]
          Length = 366

 Score =  279 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ RS  ++ L      +  + T+P+  ++L+   +G L + A+  E+E+   +   
Sbjct: 1   MKFTIARSHFIKPLQQVSGALGGRPTLPILGNLLINVENGQLSMTATDLEVELISKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPSRKFIDICRGLPDDAVITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    L+ L+E+T F+MA +++RYYLNG+ F I  E   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQGELRALIEKTQFSMANQDVRYYLNGMLFEI--EGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAALSADFAQ-KQIIVPRKGVQELVKLLDTPEQPVTLQIGSSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTTKTLEASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       ++V   +  +N+S  +
Sbjct: 295 NNPEQEEAEEMLDVSFEGEAIEIGFNVSYVLDVLNTLRC-----EQVRISMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|170748657|ref|YP_001754917.1| DNA polymerase III subunit beta [Methylobacterium radiotolerans JCM
           2831]
 gi|170655179|gb|ACB24234.1| DNA polymerase III, beta subunit [Methylobacterium radiotolerans
           JCM 2831]
          Length = 373

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 170/388 (43%), Positives = 238/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++TVER+ +L  LGH  R++ER+NTIP+  +VLL+A    L+++A+  +IE+T ++PA 
Sbjct: 1   MRVTVERAALLRSLGHVHRVVERRNTIPILSNVLLRAEGSGLQLRATDLDIEVTESVPAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH++YDIVRKL DGAQ+S     E G ++ I  G S F L + PE +FP 
Sbjct: 61  VADAGATTVPAHVIYDIVRKLPDGAQVSLETGGESG-QMTIRSGRSRFALGALPEGDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  + FE+A++ LK L+E+T FA++TEE RYYLNGI+ H    E    + AVATDG
Sbjct: 120 LAAGEMPHGFEIAAADLKRLIEKTQFAISTEETRYYLNGIYLHTLETENGPAMRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI-ESLSM 237
           HRLA  E+        MP +IVPRKAV EI ++L     +V V LS ++I L     L++
Sbjct: 180 HRLARVEIPAPQGSVGMPGVIVPRKAVAEIQKLLDDGGETVAVDLSPAKIRLRFAGGLTL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP +NDK L V      +AVDRVS +SS R +AVKL L+  +L +
Sbjct: 240 ISKLIDGTFPDYQRVIPANNDKRLTVERDAFAKAVDRVSTISSERGRAVKLGLAEGRLAL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+NPD G A E ++V Y    +DI FN +YLL+I   +       D  +F+L    S  
Sbjct: 300 SVNNPDSGSATEELDVDYEAAGLDIGFNARYLLDITAQLEG-----DTALFKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I+ ++            A YVLMPMR+
Sbjct: 355 LIQDREGAP---------ALYVLMPMRV 373


>gi|325499508|gb|EGC97367.1| DNA polymerase III subunit beta [Escherichia fergusonii ECD227]
          Length = 366

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGTTTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|49473789|ref|YP_031831.1| DNA polymerase III subunit beta [Bartonella quintana str. Toulouse]
 gi|49239292|emb|CAF25618.1| DNA polymerase III, beta chain [Bartonella quintana str. Toulouse]
          Length = 373

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 165/387 (42%), Positives = 251/387 (64%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M +TV+R+ +L+ LG   R++ER+NT+P+  +VL+ A+   +++KA+  ++E+T +  A+
Sbjct: 1   MHVTVDRNQLLKSLGRVHRVVERRNTVPILSNVLIDADKNGVQLKATDLDLEVTESFMAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ITV AHLLYDIVRKL DG++I    +    + +++  G ++F LQ  P+ +FP 
Sbjct: 61  VKQAGAITVPAHLLYDIVRKLLDGSEIVLSVDMNQASTMSVVSGCAHFQLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++ Y F L++S LK+L++ T FA++TEE RYYLNGI+FH +++  LKL  VATDGH
Sbjct: 121 SLPGQFGYRFSLSASSLKHLLDCTQFAISTEETRYYLNGIYFHVVDDGVLKLRLVATDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  + +  MP II+PRKAVGE+ ++LS + + +V V LSE++I  ++ S+  +
Sbjct: 181 RLAQVDMEAPSGVKDMPGIIIPRKAVGELQKLLSEEINDNVCVELSETKIRFSVGSVVFT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L VN  N   AVDRVS +SS R +AVKL++   +L + 
Sbjct: 241 SKLIDGTFPEYQRVIPLGNDKKLIVNKQNFSSAVDRVSTISSDRGRAVKLTIEQGQLKLV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A + +   Y   P++I FN +YLL+I   +S      DE+VF L  + +   
Sbjct: 301 VHNPDSGSAEDQLAATYTSDPLEIGFNSRYLLDIAGQLSG-----DEMVFMLAEAGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  D           NA YVLMP+R+
Sbjct: 356 IRDNDD---------ANALYVLMPIRV 373


>gi|90413731|ref|ZP_01221719.1| DNA polymerase III subunit beta [Photobacterium profundum 3TCK]
 gi|90325200|gb|EAS41697.1| DNA polymerase III subunit beta [Photobacterium profundum 3TCK]
          Length = 366

 Score =  279 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + ++P+  ++LL+  +G L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGALGGRPSLPILGNILLKVEEGYLSMTGTDLEVELIAKLALE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G++TV +    DI R L D A+I+   E   G  + I  G S + L + P ++FP
Sbjct: 61  ADFEIGAVTVPSRKFLDICRGLPDSAKIAVTLE---GDRILIRSGRSRYSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F L    +  L++ T F+MA +++RYYLNG+ F    +   L +VATDGH
Sbjct: 118 NIEDWQSEVEFTLPQGRMSQLIQSTQFSMAHQDVRYYLNGMLFE--TDGSHLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  +D+  ++A    IIVPRK V E++R+L + ++ V + +  S I   + +   + 
Sbjct: 176 RMAVCAIDLAQELA-TKQIIVPRKGVLELVRLLDNAEAMVDIQIGNSNIRATVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S++K +  +C  LR+A  R +I+S+ + + V+++LS  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSSNKFVEASCDELRKAFSRAAILSNEKFRGVRVNLSKGEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       D+V   L  +N+S  +
Sbjct: 295 NNPEQEEAEEFLDVDYQGDDLEIGFNVSYVLDVLNTLKC-----DQVRLSLTDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D          A YV+MP+R+
Sbjct: 350 EDCANDE---------AMYVVMPIRL 366


>gi|293464025|ref|ZP_06664439.1| DNA polymerase III [Escherichia coli B088]
 gi|300815052|ref|ZP_07095277.1| DNA polymerase III, beta subunit [Escherichia coli MS 107-1]
 gi|291321657|gb|EFE61093.1| DNA polymerase III [Escherichia coli B088]
 gi|300531944|gb|EFK53006.1| DNA polymerase III, beta subunit [Escherichia coli MS 107-1]
 gi|323944173|gb|EGB40253.1| DNA polymerase III [Escherichia coli H120]
          Length = 366

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QQHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|197262814|ref|ZP_03162888.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197241069|gb|EDY23689.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
          Length = 366

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +  S
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFE--TEGSELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + + A +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPLEASLPSH-SVIVPRKGVIELMRMLDGGENPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYGGTEMEIGFNVSYVLDVLNALKC-----ETVRIMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          NA YV+MPMR+
Sbjct: 350 EDA---------ASQNAAYVVMPMRL 366


>gi|15804295|ref|NP_290334.1| DNA polymerase III subunit beta [Escherichia coli O157:H7 EDL933]
 gi|15833890|ref|NP_312663.1| DNA polymerase III subunit beta [Escherichia coli O157:H7 str.
           Sakai]
 gi|16131569|ref|NP_418156.1| DNA polymerase III, beta subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|26250442|ref|NP_756482.1| DNA polymerase III subunit beta [Escherichia coli CFT073]
 gi|74314015|ref|YP_312434.1| DNA polymerase III subunit beta [Shigella sonnei Ss046]
 gi|82546035|ref|YP_409982.1| DNA polymerase III subunit beta [Shigella boydii Sb227]
 gi|82779230|ref|YP_405579.1| DNA polymerase III subunit beta [Shigella dysenteriae Sd197]
 gi|89110312|ref|AP_004092.1| DNA polymerase III, beta subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|91213223|ref|YP_543209.1| DNA polymerase III subunit beta [Escherichia coli UTI89]
 gi|110644044|ref|YP_671774.1| DNA polymerase III subunit beta [Escherichia coli 536]
 gi|117625977|ref|YP_859300.1| DNA polymerase III subunit beta [Escherichia coli APEC O1]
 gi|157156673|ref|YP_001465186.1| DNA polymerase III subunit beta [Escherichia coli E24377A]
 gi|157163181|ref|YP_001460499.1| DNA polymerase III subunit beta [Escherichia coli HS]
 gi|168748583|ref|ZP_02773605.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753590|ref|ZP_02778597.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759887|ref|ZP_02784894.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766188|ref|ZP_02791195.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772264|ref|ZP_02797271.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779923|ref|ZP_02804930.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|168798736|ref|ZP_02823743.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|170018063|ref|YP_001723017.1| DNA polymerase III subunit beta [Escherichia coli ATCC 8739]
 gi|170083203|ref|YP_001732523.1| DNA polymerase III, beta subunit [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682488|ref|YP_001746029.1| DNA polymerase III subunit beta [Escherichia coli SMS-3-5]
 gi|187730327|ref|YP_001882465.1| DNA polymerase III subunit beta [Shigella boydii CDC 3083-94]
 gi|188492542|ref|ZP_02999812.1| DNA polymerase III, beta subunit [Escherichia coli 53638]
 gi|191165808|ref|ZP_03027646.1| DNA polymerase III, beta subunit [Escherichia coli B7A]
 gi|191170441|ref|ZP_03031994.1| DNA polymerase III, beta subunit [Escherichia coli F11]
 gi|193063787|ref|ZP_03044874.1| DNA polymerase III, beta subunit [Escherichia coli E22]
 gi|194428142|ref|ZP_03060686.1| DNA polymerase III, beta subunit [Escherichia coli B171]
 gi|194431323|ref|ZP_03063616.1| DNA polymerase III, beta subunit [Shigella dysenteriae 1012]
 gi|194435912|ref|ZP_03068015.1| DNA polymerase III, beta subunit [Escherichia coli 101-1]
 gi|195936322|ref|ZP_03081704.1| DNA polymerase III subunit beta [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807282|ref|ZP_03249619.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813217|ref|ZP_03254546.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820496|ref|ZP_03260816.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400437|ref|YP_002273227.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921178|ref|YP_002295262.1| DNA polymerase III subunit beta [Escherichia coli SE11]
 gi|217324148|ref|ZP_03440232.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218551231|ref|YP_002385023.1| DNA polymerase III subunit beta [Escherichia fergusonii ATCC 35469]
 gi|218556266|ref|YP_002389180.1| DNA polymerase III subunit beta [Escherichia coli IAI1]
 gi|218560776|ref|YP_002393689.1| DNA polymerase III subunit beta [Escherichia coli S88]
 gi|218691989|ref|YP_002400201.1| DNA polymerase III subunit beta [Escherichia coli ED1a]
 gi|218697423|ref|YP_002405090.1| DNA polymerase III subunit beta [Escherichia coli 55989]
 gi|218702550|ref|YP_002410179.1| DNA polymerase III subunit beta [Escherichia coli IAI39]
 gi|218707347|ref|YP_002414866.1| DNA polymerase III subunit beta [Escherichia coli UMN026]
 gi|227883922|ref|ZP_04001727.1| DNA-directed DNA polymerase [Escherichia coli 83972]
 gi|237703501|ref|ZP_04533982.1| DNA polymerase III subunit beta [Escherichia sp. 3_2_53FAA]
 gi|238902791|ref|YP_002928587.1| DNA polymerase III, beta subunit [Escherichia coli BW2952]
 gi|253771437|ref|YP_003034268.1| DNA polymerase III subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038918|ref|ZP_04872970.1| DNA polymerase III [Escherichia sp. 1_1_43]
 gi|254163652|ref|YP_003046760.1| DNA polymerase III subunit beta [Escherichia coli B str. REL606]
 gi|254795704|ref|YP_003080541.1| DNA polymerase III subunit beta [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021281|ref|ZP_05435146.1| DNA polymerase III subunit beta [Shigella sp. D9]
 gi|256025568|ref|ZP_05439433.1| DNA polymerase III subunit beta [Escherichia sp. 4_1_40B]
 gi|260846514|ref|YP_003224292.1| DNA polymerase III, beta subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260857888|ref|YP_003231779.1| DNA polymerase III, beta subunit [Escherichia coli O26:H11 str.
           11368]
 gi|260870432|ref|YP_003236834.1| DNA polymerase III, beta subunit [Escherichia coli O111:H- str.
           11128]
 gi|261225854|ref|ZP_05940135.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258899|ref|ZP_05951432.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285120|ref|YP_003501938.1| DNA polymerase III subunit beta [Escherichia coli O55:H7 str.
           CB9615]
 gi|293407341|ref|ZP_06651263.1| DNA polymerase III subunit beta [Escherichia coli FVEC1412]
 gi|293413155|ref|ZP_06655821.1| DNA polymerase III [Escherichia coli B354]
 gi|293417174|ref|ZP_06659801.1| DNA polymerase III [Escherichia coli B185]
 gi|297518856|ref|ZP_06937242.1| DNA polymerase III subunit beta [Escherichia coli OP50]
 gi|298383082|ref|ZP_06992677.1| DNA polymerase III subunit beta [Escherichia coli FVEC1302]
 gi|300824314|ref|ZP_07104430.1| DNA polymerase III, beta subunit [Escherichia coli MS 119-7]
 gi|300896030|ref|ZP_07114591.1| DNA polymerase III, beta subunit [Escherichia coli MS 198-1]
 gi|300903024|ref|ZP_07120966.1| DNA polymerase III, beta subunit [Escherichia coli MS 84-1]
 gi|300917469|ref|ZP_07134129.1| DNA polymerase III, beta subunit [Escherichia coli MS 115-1]
 gi|300925525|ref|ZP_07141400.1| DNA polymerase III, beta subunit [Escherichia coli MS 182-1]
 gi|300932332|ref|ZP_07147600.1| DNA polymerase III, beta subunit [Escherichia coli MS 187-1]
 gi|300940886|ref|ZP_07155413.1| DNA polymerase III, beta subunit [Escherichia coli MS 21-1]
 gi|300947538|ref|ZP_07161715.1| DNA polymerase III, beta subunit [Escherichia coli MS 116-1]
 gi|300956293|ref|ZP_07168595.1| DNA polymerase III, beta subunit [Escherichia coli MS 175-1]
 gi|300983652|ref|ZP_07176693.1| DNA polymerase III, beta subunit [Escherichia coli MS 200-1]
 gi|300984541|ref|ZP_07177031.1| DNA polymerase III, beta subunit [Escherichia coli MS 45-1]
 gi|301020910|ref|ZP_07184965.1| DNA polymerase III, beta subunit [Escherichia coli MS 69-1]
 gi|301028494|ref|ZP_07191734.1| DNA polymerase III, beta subunit [Escherichia coli MS 196-1]
 gi|301047519|ref|ZP_07194595.1| DNA polymerase III, beta subunit [Escherichia coli MS 185-1]
 gi|301305953|ref|ZP_07212035.1| DNA polymerase III, beta subunit [Escherichia coli MS 124-1]
 gi|301325007|ref|ZP_07218557.1| DNA polymerase III, beta subunit [Escherichia coli MS 78-1]
 gi|301644373|ref|ZP_07244374.1| DNA polymerase III, beta subunit [Escherichia coli MS 146-1]
 gi|306815946|ref|ZP_07450084.1| DNA polymerase III subunit beta [Escherichia coli NC101]
 gi|307140401|ref|ZP_07499757.1| DNA polymerase III subunit beta [Escherichia coli H736]
 gi|307313230|ref|ZP_07592855.1| DNA polymerase III, beta subunit [Escherichia coli W]
 gi|309784249|ref|ZP_07678888.1| DNA polymerase III, beta subunit [Shigella dysenteriae 1617]
 gi|309795750|ref|ZP_07690165.1| DNA polymerase III, beta subunit [Escherichia coli MS 145-7]
 gi|312972007|ref|ZP_07786181.1| DNA polymerase III, beta subunit [Escherichia coli 1827-70]
 gi|331644425|ref|ZP_08345554.1| DNA polymerase III, beta subunit [Escherichia coli H736]
 gi|331649527|ref|ZP_08350613.1| DNA polymerase III, beta subunit [Escherichia coli M605]
 gi|331655361|ref|ZP_08356360.1| DNA polymerase III, beta subunit [Escherichia coli M718]
 gi|331660043|ref|ZP_08360981.1| DNA polymerase III, beta subunit [Escherichia coli TA206]
 gi|331665351|ref|ZP_08366252.1| DNA polymerase III, beta subunit [Escherichia coli TA143]
 gi|331670545|ref|ZP_08371384.1| DNA polymerase III, beta subunit [Escherichia coli TA271]
 gi|331675191|ref|ZP_08375944.1| DNA polymerase III, beta subunit [Escherichia coli TA280]
 gi|331679799|ref|ZP_08380469.1| DNA polymerase III, beta subunit [Escherichia coli H591]
 gi|331685425|ref|ZP_08386011.1| DNA polymerase III, beta subunit [Escherichia coli H299]
 gi|332282512|ref|ZP_08394925.1| DNA polymerase III subunit beta [Shigella sp. D9]
 gi|71159295|sp|P0A990|DPO3B_ECO57 RecName: Full=DNA polymerase III subunit beta
 gi|71159296|sp|P0A989|DPO3B_ECOL6 RecName: Full=DNA polymerase III subunit beta
 gi|71159297|sp|P0A988|DPO3B_ECOLI RecName: Full=DNA polymerase III subunit beta
 gi|494833|pdb|2POL|A Chain A, Three-Dimensional Structure Of The Beta Subunit Of
           Escherichia Coli Dna Polymerase Iii Holoenzyme: A
           Sliding Dna Clamp
 gi|494834|pdb|2POL|B Chain B, Three-Dimensional Structure Of The Beta Subunit Of
           Escherichia Coli Dna Polymerase Iii Holoenzyme: A
           Sliding Dna Clamp
 gi|34809863|pdb|1MMI|A Chain A, E. Coli Dna Polymerase Beta Subunit
 gi|34809864|pdb|1MMI|B Chain B, E. Coli Dna Polymerase Beta Subunit
 gi|39654966|pdb|1UNN|A Chain A, Complex Of Beta-Clamp Processivity Factor And Little
           Finger Domain Of Poliv
 gi|39654967|pdb|1UNN|B Chain B, Complex Of Beta-Clamp Processivity Factor And Little
           Finger Domain Of Poliv
 gi|51247132|pdb|1OK7|A Chain A, A Conserved Protein Binding-Site On Bacterial Sliding
           Clamps
 gi|51247133|pdb|1OK7|B Chain B, A Conserved Protein Binding-Site On Bacterial Sliding
           Clamps
 gi|166235467|pdb|3BEP|A Chain A, Structure Of A Sliding Clamp On Dna
 gi|166235468|pdb|3BEP|B Chain B, Structure Of A Sliding Clamp On Dna
 gi|194709177|pdb|3D1E|A Chain A, Crystal Structure Of E. Coli Sliding Clamp (Beta) Bound To
           A Polymerase Ii Peptide
 gi|194709178|pdb|3D1E|B Chain B, Crystal Structure Of E. Coli Sliding Clamp (Beta) Bound To
           A Polymerase Ii Peptide
 gi|194709180|pdb|3D1F|A Chain A, Crystal Structure Of E. Coli Sliding Clamp (Beta) Bound To
           A Polymerase Iii Peptide
 gi|194709181|pdb|3D1F|B Chain B, Crystal Structure Of E. Coli Sliding Clamp (Beta) Bound To
           A Polymerase Iii Peptide
 gi|194709184|pdb|3D1G|A Chain A, Structure Of A Small Molecule Inhibitor Bound To A Dna
           Sliding Clamp
 gi|194709185|pdb|3D1G|B Chain B, Structure Of A Small Molecule Inhibitor Bound To A Dna
           Sliding Clamp
 gi|12518540|gb|AAG58898.1|AE005601_4 DNA polymerase III, beta-subunit [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110872|gb|AAN83056.1|AE016769_171 DNA polymerase III, beta chain [Escherichia coli CFT073]
 gi|145761|gb|AAB59150.1| DNA polymerase III beta-subunit [Escherichia coli]
 gi|290549|gb|AAA62052.1| DNA polymerase III beta-subunit [Escherichia coli]
 gi|1790136|gb|AAC76724.1| DNA polymerase III, beta subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|13364111|dbj|BAB38059.1| DNA polymerase III beta-subunit [Escherichia coli O157:H7 str.
           Sakai]
 gi|73857492|gb|AAZ90199.1| DNA polymerase III beta subunit [Shigella sonnei Ss046]
 gi|81243378|gb|ABB64088.1| DNA polymerase III, beta-subunit [Shigella dysenteriae Sd197]
 gi|81247446|gb|ABB68154.1| DNA polymerase III beta-subunit [Shigella boydii Sb227]
 gi|85676343|dbj|BAE77593.1| DNA polymerase III, beta subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|91074797|gb|ABE09678.1| DNA polymerase III, beta-subunit [Escherichia coli UTI89]
 gi|110345636|gb|ABG71873.1| DNA polymerase III, beta chain [Escherichia coli 536]
 gi|115515101|gb|ABJ03176.1| DNA polymerase III subunit beta [Escherichia coli APEC O1]
 gi|157068861|gb|ABV08116.1| DNA polymerase III, beta subunit [Escherichia coli HS]
 gi|157078703|gb|ABV18411.1| DNA polymerase III, beta subunit [Escherichia coli E24377A]
 gi|169752991|gb|ACA75690.1| DNA polymerase III, beta subunit [Escherichia coli ATCC 8739]
 gi|169891038|gb|ACB04745.1| DNA polymerase III, beta subunit [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520206|gb|ACB18384.1| DNA polymerase III, beta subunit [Escherichia coli SMS-3-5]
 gi|187427319|gb|ACD06593.1| DNA polymerase III, beta subunit [Shigella boydii CDC 3083-94]
 gi|187771361|gb|EDU35205.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016968|gb|EDU55090.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188487741|gb|EDU62844.1| DNA polymerase III, beta subunit [Escherichia coli 53638]
 gi|189002623|gb|EDU71609.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359039|gb|EDU77458.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364639|gb|EDU83058.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369478|gb|EDU87894.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189378717|gb|EDU97133.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|190904132|gb|EDV63843.1| DNA polymerase III, beta subunit [Escherichia coli B7A]
 gi|190909249|gb|EDV68835.1| DNA polymerase III, beta subunit [Escherichia coli F11]
 gi|192930502|gb|EDV83109.1| DNA polymerase III, beta subunit [Escherichia coli E22]
 gi|194413900|gb|EDX30178.1| DNA polymerase III, beta subunit [Escherichia coli B171]
 gi|194420778|gb|EDX36854.1| DNA polymerase III, beta subunit [Shigella dysenteriae 1012]
 gi|194425455|gb|EDX41439.1| DNA polymerase III, beta subunit [Escherichia coli 101-1]
 gi|208727083|gb|EDZ76684.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734494|gb|EDZ83181.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740619|gb|EDZ88301.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161837|gb|ACI39270.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209754118|gb|ACI75366.1| replication initiation protein DnaA [Escherichia coli]
 gi|209754120|gb|ACI75367.1| replication initiation protein DnaA [Escherichia coli]
 gi|209754122|gb|ACI75368.1| replication initiation protein DnaA [Escherichia coli]
 gi|209754124|gb|ACI75369.1| replication initiation protein DnaA [Escherichia coli]
 gi|209754126|gb|ACI75370.1| replication initiation protein DnaA [Escherichia coli]
 gi|209914437|dbj|BAG79511.1| DNA polymerase III beta subunit [Escherichia coli SE11]
 gi|217320369|gb|EEC28793.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354155|emb|CAV00755.1| DNA polymerase III, beta subunit [Escherichia coli 55989]
 gi|218358773|emb|CAQ91430.1| DNA polymerase III, beta subunit [Escherichia fergusonii ATCC
           35469]
 gi|218363035|emb|CAR00674.1| DNA polymerase III, beta subunit [Escherichia coli IAI1]
 gi|218367545|emb|CAR05330.1| DNA polymerase III, beta subunit [Escherichia coli S88]
 gi|218372536|emb|CAR20411.1| DNA polymerase III, beta subunit [Escherichia coli IAI39]
 gi|218429553|emb|CAR10376.1| DNA polymerase III, beta subunit [Escherichia coli ED1a]
 gi|218434444|emb|CAR15372.1| DNA polymerase III, beta subunit [Escherichia coli UMN026]
 gi|222035415|emb|CAP78160.1| DNA polymerase III subunit beta [Escherichia coli LF82]
 gi|226838883|gb|EEH70910.1| DNA polymerase III [Escherichia sp. 1_1_43]
 gi|226902765|gb|EEH89024.1| DNA polymerase III subunit beta [Escherichia sp. 3_2_53FAA]
 gi|227839200|gb|EEJ49666.1| DNA-directed DNA polymerase [Escherichia coli 83972]
 gi|238860831|gb|ACR62829.1| DNA polymerase III, beta subunit [Escherichia coli BW2952]
 gi|242379240|emb|CAQ34045.1| dnaN, subunit of DNA polymerase III, beta subunit and DNA
           polymerase III, holoenzyme [Escherichia coli BL21(DE3)]
 gi|253322481|gb|ACT27083.1| DNA polymerase III, beta subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975553|gb|ACT41224.1| DNA polymerase III subunit beta [Escherichia coli B str. REL606]
 gi|253979709|gb|ACT45379.1| DNA polymerase III subunit beta [Escherichia coli BL21(DE3)]
 gi|254595104|gb|ACT74465.1| DNA polymerase III, beta subunit [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756537|dbj|BAI28039.1| DNA polymerase III, beta subunit [Escherichia coli O26:H11 str.
           11368]
 gi|257761661|dbj|BAI33158.1| DNA polymerase III, beta subunit [Escherichia coli O103:H2 str.
           12009]
 gi|257766788|dbj|BAI38283.1| DNA polymerase III, beta subunit [Escherichia coli O111:H- str.
           11128]
 gi|260447281|gb|ACX37703.1| DNA polymerase III, beta subunit [Escherichia coli DH1]
 gi|281180755|dbj|BAI57085.1| DNA polymerase III beta subunit [Escherichia coli SE15]
 gi|290764993|gb|ADD58954.1| DNA polymerase III subunit beta [Escherichia coli O55:H7 str.
           CB9615]
 gi|291425632|gb|EFE98668.1| DNA polymerase III subunit beta [Escherichia coli FVEC1412]
 gi|291431205|gb|EFF04198.1| DNA polymerase III [Escherichia coli B185]
 gi|291468288|gb|EFF10783.1| DNA polymerase III [Escherichia coli B354]
 gi|294492870|gb|ADE91626.1| DNA polymerase III, beta subunit [Escherichia coli IHE3034]
 gi|298276918|gb|EFI18436.1| DNA polymerase III subunit beta [Escherichia coli FVEC1302]
 gi|299878456|gb|EFI86667.1| DNA polymerase III, beta subunit [Escherichia coli MS 196-1]
 gi|300300579|gb|EFJ56964.1| DNA polymerase III, beta subunit [Escherichia coli MS 185-1]
 gi|300306875|gb|EFJ61395.1| DNA polymerase III, beta subunit [Escherichia coli MS 200-1]
 gi|300316880|gb|EFJ66664.1| DNA polymerase III, beta subunit [Escherichia coli MS 175-1]
 gi|300360090|gb|EFJ75960.1| DNA polymerase III, beta subunit [Escherichia coli MS 198-1]
 gi|300398377|gb|EFJ81915.1| DNA polymerase III, beta subunit [Escherichia coli MS 69-1]
 gi|300404930|gb|EFJ88468.1| DNA polymerase III, beta subunit [Escherichia coli MS 84-1]
 gi|300408374|gb|EFJ91912.1| DNA polymerase III, beta subunit [Escherichia coli MS 45-1]
 gi|300415273|gb|EFJ98583.1| DNA polymerase III, beta subunit [Escherichia coli MS 115-1]
 gi|300418365|gb|EFK01676.1| DNA polymerase III, beta subunit [Escherichia coli MS 182-1]
 gi|300452875|gb|EFK16495.1| DNA polymerase III, beta subunit [Escherichia coli MS 116-1]
 gi|300454367|gb|EFK17860.1| DNA polymerase III, beta subunit [Escherichia coli MS 21-1]
 gi|300459918|gb|EFK23411.1| DNA polymerase III, beta subunit [Escherichia coli MS 187-1]
 gi|300523201|gb|EFK44270.1| DNA polymerase III, beta subunit [Escherichia coli MS 119-7]
 gi|300838804|gb|EFK66564.1| DNA polymerase III, beta subunit [Escherichia coli MS 124-1]
 gi|300848101|gb|EFK75861.1| DNA polymerase III, beta subunit [Escherichia coli MS 78-1]
 gi|301077314|gb|EFK92120.1| DNA polymerase III, beta subunit [Escherichia coli MS 146-1]
 gi|305850342|gb|EFM50799.1| DNA polymerase III subunit beta [Escherichia coli NC101]
 gi|306906913|gb|EFN37422.1| DNA polymerase III, beta subunit [Escherichia coli W]
 gi|307555841|gb|ADN48616.1| DNA polymerase III, beta-subunit [Escherichia coli ABU 83972]
 gi|307628777|gb|ADN73081.1| DNA polymerase III subunit beta [Escherichia coli UM146]
 gi|308120629|gb|EFO57891.1| DNA polymerase III, beta subunit [Escherichia coli MS 145-7]
 gi|308927756|gb|EFP73224.1| DNA polymerase III, beta subunit [Shigella dysenteriae 1617]
 gi|309704148|emb|CBJ03495.1| DNA polymerase III beta-subunit [Escherichia coli ETEC H10407]
 gi|310334384|gb|EFQ00589.1| DNA polymerase III, beta subunit [Escherichia coli 1827-70]
 gi|312948268|gb|ADR29095.1| DNA polymerase III subunit beta [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315063007|gb|ADT77334.1| DNA polymerase III, beta subunit [Escherichia coli W]
 gi|315138285|dbj|BAJ45444.1| DNA polymerase III subunit beta [Escherichia coli DH1]
 gi|315254612|gb|EFU34580.1| DNA polymerase III, beta subunit [Escherichia coli MS 85-1]
 gi|315285494|gb|EFU44939.1| DNA polymerase III, beta subunit [Escherichia coli MS 110-3]
 gi|315292859|gb|EFU52211.1| DNA polymerase III, beta subunit [Escherichia coli MS 153-1]
 gi|315296899|gb|EFU56187.1| DNA polymerase III, beta subunit [Escherichia coli MS 16-3]
 gi|315618593|gb|EFU99179.1| DNA polymerase III, beta subunit [Escherichia coli 3431]
 gi|320174825|gb|EFW49948.1| DNA polymerase III beta subunit [Shigella dysenteriae CDC 74-1112]
 gi|320180042|gb|EFW54984.1| DNA polymerase III beta subunit [Shigella boydii ATCC 9905]
 gi|320185534|gb|EFW60300.1| DNA polymerase III beta subunit [Shigella flexneri CDC 796-83]
 gi|320191199|gb|EFW65849.1| DNA polymerase III beta subunit [Escherichia coli O157:H7 str.
           EC1212]
 gi|320193753|gb|EFW68386.1| DNA polymerase III beta subunit [Escherichia coli WV_060327]
 gi|320201271|gb|EFW75852.1| DNA polymerase III beta subunit [Escherichia coli EC4100B]
 gi|320639426|gb|EFX09041.1| DNA polymerase III subunit beta [Escherichia coli O157:H7 str.
           G5101]
 gi|320644869|gb|EFX13905.1| DNA polymerase III subunit beta [Escherichia coli O157:H- str.
           493-89]
 gi|320650133|gb|EFX18629.1| DNA polymerase III subunit beta [Escherichia coli O157:H- str. H
           2687]
 gi|320655481|gb|EFX23416.1| DNA polymerase III subunit beta [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661107|gb|EFX28543.1| DNA polymerase III subunit beta [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666233|gb|EFX33239.1| DNA polymerase III subunit beta [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323155377|gb|EFZ41560.1| DNA polymerase III, beta subunit [Escherichia coli EPECa14]
 gi|323161047|gb|EFZ46966.1| DNA polymerase III, beta subunit [Escherichia coli E128010]
 gi|323164687|gb|EFZ50482.1| DNA polymerase III, beta subunit [Shigella sonnei 53G]
 gi|323173319|gb|EFZ58948.1| DNA polymerase III, beta subunit [Escherichia coli LT-68]
 gi|323177713|gb|EFZ63297.1| DNA polymerase III, beta subunit [Escherichia coli 1180]
 gi|323182496|gb|EFZ67900.1| DNA polymerase III, beta subunit [Escherichia coli 1357]
 gi|323189564|gb|EFZ74844.1| DNA polymerase III, beta subunit [Escherichia coli RN587/1]
 gi|323376399|gb|ADX48667.1| DNA polymerase III, beta subunit [Escherichia coli KO11]
 gi|323934948|gb|EGB31326.1| DNA polymerase III [Escherichia coli E1520]
 gi|323949944|gb|EGB45828.1| DNA polymerase III [Escherichia coli H252]
 gi|323955005|gb|EGB50783.1| DNA polymerase III [Escherichia coli H263]
 gi|323959766|gb|EGB55416.1| DNA polymerase III [Escherichia coli H489]
 gi|323965762|gb|EGB61213.1| DNA polymerase III [Escherichia coli M863]
 gi|323971178|gb|EGB66424.1| DNA polymerase III [Escherichia coli TA007]
 gi|323975232|gb|EGB70336.1| DNA polymerase III [Escherichia coli TW10509]
 gi|324008037|gb|EGB77256.1| DNA polymerase III, beta subunit [Escherichia coli MS 57-2]
 gi|324012738|gb|EGB81957.1| DNA polymerase III, beta subunit [Escherichia coli MS 60-1]
 gi|324018431|gb|EGB87650.1| DNA polymerase III, beta subunit [Escherichia coli MS 117-3]
 gi|324115947|gb|EGC09873.1| DNA polymerase III [Escherichia coli E1167]
 gi|326337250|gb|EGD61085.1| DNA polymerase III beta subunit [Escherichia coli O157:H7 str.
           1044]
 gi|326341621|gb|EGD65410.1| DNA polymerase III beta subunit [Escherichia coli O157:H7 str.
           1125]
 gi|327250844|gb|EGE62546.1| DNA polymerase III, beta subunit [Escherichia coli STEC_7v]
 gi|331036719|gb|EGI08945.1| DNA polymerase III, beta subunit [Escherichia coli H736]
 gi|331042025|gb|EGI14169.1| DNA polymerase III, beta subunit [Escherichia coli M605]
 gi|331047376|gb|EGI19454.1| DNA polymerase III, beta subunit [Escherichia coli M718]
 gi|331053258|gb|EGI25291.1| DNA polymerase III, beta subunit [Escherichia coli TA206]
 gi|331057861|gb|EGI29847.1| DNA polymerase III, beta subunit [Escherichia coli TA143]
 gi|331062607|gb|EGI34527.1| DNA polymerase III, beta subunit [Escherichia coli TA271]
 gi|331067636|gb|EGI39038.1| DNA polymerase III, beta subunit [Escherichia coli TA280]
 gi|331072971|gb|EGI44296.1| DNA polymerase III, beta subunit [Escherichia coli H591]
 gi|331077796|gb|EGI49008.1| DNA polymerase III, beta subunit [Escherichia coli H299]
 gi|332084052|gb|EGI89259.1| DNA polymerase III, beta subunit [Shigella dysenteriae 155-74]
 gi|332084891|gb|EGI90074.1| DNA polymerase III, beta subunit [Shigella boydii 5216-82]
 gi|332089554|gb|EGI94658.1| DNA polymerase III, beta subunit [Shigella boydii 3594-74]
 gi|332104864|gb|EGJ08210.1| DNA polymerase III subunit beta [Shigella sp. D9]
 gi|332345692|gb|AEE59026.1| DNA polymerase III, beta subunit DnaN [Escherichia coli UMNK88]
          Length = 366

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|297184289|gb|ADI20406.1| DNA polymerase sliding clamp subunit (pcna homolog) [uncultured
           alpha proteobacterium EB080_L43F08]
          Length = 372

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 144/387 (37%), Positives = 226/387 (58%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ERS +L+ +  A  ++ER+NTIP+  +VL++A  G +  +A+  +IE+   +   
Sbjct: 1   MKVSIERSALLKAMSQAQSVVERRNTIPILANVLIEAEGGEISFRATDLDIEVVYKVVGM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV AH L++IVRKL DGA +    +      +++  G S+F L + P  +FP 
Sbjct: 61  VERAGATTVGAHTLHEIVRKLPDGAMVELTDDATAN-RLDVVAGRSSFSLATLPREDFPI 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               EY  +F   S  L+ L +++ FA++TEE RYYLNG++ H ++      L  VATDG
Sbjct: 120 MANSEYACNFSAQSETLRRLFDKSKFAISTEETRYYLNGVYMHSSDGENGRVLRCVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +      +P +IVPRK VGE+ ++L   +  + VS+SE++I  +   + ++
Sbjct: 180 HRLARIDTQLPEGADTLPGVIVPRKTVGELRKLLDDDEMKIAVSVSETKIRFSTPEIILT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     QAVDRVS +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGSFPDYTRVIPQGNTRRLEVDAAEFAQAVDRVSTVSSERSRAVKLTLEDDRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS     
Sbjct: 300 VNAPDSGAAEEELVVGYADERLEIGFNAKYLLEIAGQVD-----RENAVFMFNSSGDPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R  + +S         A YV+MPMR+
Sbjct: 355 MREGNDES---------AVYVVMPMRV 372


>gi|92112138|ref|YP_572066.1| DNA polymerase III subunit beta [Chromohalobacter salexigens DSM
           3043]
 gi|91795228|gb|ABE57367.1| DNA polymerase III, beta subunit [Chromohalobacter salexigens DSM
           3043]
          Length = 367

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 201/386 (52%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITG-AIPA 59
           M+ T+ R  +L  L     ++ER+ T+PV  +VLLQ  D  L +  +  E+E+ G   P 
Sbjct: 1   MRFTITREALLRPLSLVAGVVERRQTLPVLSNVLLQVQDSQLALTGTDLEVELIGRTTPH 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            VD  GS TV A  L DI + L +   I+F  E        +  G S F L + P +EFP
Sbjct: 61  HVDEPGSATVPARKLMDICKSLPEQTDITFTLEEG---RAILRAGRSRFTLSTLPVAEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +   +  LA   LK+L++ T FAMA +++RYYLNG+          +  VATDGH
Sbjct: 118 NIEGSQSDTTLTLARGTLKHLIDATSFAMAQQDVRYYLNGMLLEF--GHHLVRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV       ++     +IVPRK + E+ R+L   D  V++++  + +       + + 
Sbjct: 176 RLAVCARSADVEVEPSQKLIVPRKGILELARLLDGSDEPVELTIGGTHLRAQTGDFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y  VIP   DK +      LRQ + R +I+S+ + + V+L+L  + L +T 
Sbjct: 236 KLVDGKFPDYDRVIPRGGDKVVIAERGELRQVLSRTAILSNEKYRGVRLNLEENNLRVTA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E++ + Y+   +++ FN  YL++++  + +     D V   L   NSS  +
Sbjct: 296 NNPEQEEAEENVAIEYDGGALEVGFNVGYLVDVLGVLDA-----DRVQMTLSDPNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +A YV+MPMR+
Sbjct: 351 EEP---------GGGDAMYVVMPMRL 367


>gi|197334198|ref|YP_002154782.1| DNA polymerase III, beta subunit [Vibrio fischeri MJ11]
 gi|197315688|gb|ACH65135.1| DNA polymerase III, beta subunit [Vibrio fischeri MJ11]
          Length = 366

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + ++P+  ++LLQ  +G L + A+  E+E+   I   
Sbjct: 1   MKFSIERSLLLKPLQQVSGALGGRPSLPILGNILLQVENGQLSMTATDLEVELISKITLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G++TV +    DI R L D A I+   E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGAVTVPSRKFLDICRGLPDSANITIVLE---GDRVLVRSGRSRFTLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  E      L+ + L+ L+E T F+MA +++RYYLNG+ F          +VATDGH
Sbjct: 118 NIEGWESEVEITLSQAQLRKLIESTQFSMANQDVRYYLNGMMFETQGNI--FRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  + + +++ +   +I+PRK + E++R+L S D SV +    S +   + +   + 
Sbjct: 176 RMAVCNMPVESELPEQ-QVIMPRKGIQELVRLLDSPDQSVTLQFGNSNVRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S++K L  +C  LRQA  R +I+S+ + + V+++L+++++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSSNKTLEADCDELRQAFARAAILSNEKFRGVRVNLANNQMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       + V   + ++N+S  +
Sbjct: 295 NNPEQEEAEEILDVDFQGDDIEIGFNVSYVLDVLNTLKC-----ERVRISMTTANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D            YV+MP+R+
Sbjct: 350 EDCANDEAQ---------YVVMPIRL 366


>gi|269965277|ref|ZP_06179398.1| DNA polymerase III, beta chain [Vibrio alginolyticus 40B]
 gi|269830078|gb|EEZ84306.1| DNA polymerase III, beta chain [Vibrio alginolyticus 40B]
          Length = 366

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 221/386 (57%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++LL+  + +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEENVLSMTATDLEVELVSKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDAIITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L+ + L+ L+++T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + + + + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFTFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S +K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQSTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       + V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVSFEGDAIEIGFNVSYVLDVLNTLRC-----ENVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|323462780|pdb|2XUR|A Chain A, The G157c Mutation In The Escherichia Coli Sliding Clamp
           Specifically Affects Initiation Of Replication
 gi|323462781|pdb|2XUR|B Chain B, The G157c Mutation In The Escherichia Coli Sliding Clamp
           Specifically Affects Initiation Of Replication
          Length = 373

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 8   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 67

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 68  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 124

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLN + F    E  +L  VATDGH
Sbjct: 125 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNCMLFETEGE--ELRTVATDGH 182

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 183 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 241

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 242 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 301

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 302 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 356

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 357 EDAASQSAA---------YVVMPMRL 373


>gi|226326919|ref|ZP_03802437.1| hypothetical protein PROPEN_00779 [Proteus penneri ATCC 35198]
 gi|225204756|gb|EEG87110.1| hypothetical protein PROPEN_00779 [Proteus penneri ATCC 35198]
          Length = 367

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 205/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LL+  +  L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREQLLKPLQQVSGPLGGRPTLPILGNLLLKVTENTLSLTGTDLEMEMVARVNLS 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+IS   +   G  + +  G S F L + P S+FP
Sbjct: 61  QSHEIGATTVPARKFFDIWRGLPEGAEISVELD---GDRLLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E+ +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFE--TENTELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +DI   +     I+  +  +  +  +    +SS+++ +  + I  ++     + 
Sbjct: 176 RLAVCSMDIGQSLPGHSVIVPRKGVIELMRLLDGGGESSLQLQIGSNNIRAHVGDFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K +   C  L+QA  R +I+S+ + + V+++L+S +L +T 
Sbjct: 236 KLVDGRFPDYRRVLPKNPTKTVIAGCDILKQAFSRAAILSNEKFRGVRINLTSGQLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  YLL++++ +       +EV   L  + SSV +
Sbjct: 296 NNPEQEEAEEIVDVQYQGEEMEIGFNVSYLLDVLNTLKC-----EEVKLLLTDAVSSVQV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 351 ENVASSAAA---------YVVMPMRL 367


>gi|254507273|ref|ZP_05119409.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus 16]
 gi|219549733|gb|EED26722.1| DNA polymerase III, beta subunit [Vibrio parahaemolyticus 16]
          Length = 366

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 219/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + T+P+  ++LL+  D +L + A+  E+E+   +   
Sbjct: 1   MKFSIERSHLLKPLQQVSGALGGRPTLPILGNLLLKVEDNVLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D + I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDSVITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  E   L +VATDGH
Sbjct: 118 NIEDWQSEVEISLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--EGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTALGADFAQQ-QIIVPRKGVLELVKLMDAPEQPVTLQIGSSNVRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K L   C  LR A  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNTTKTLEAGCDELRSAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++  P++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVSFDGEPIEIGFNVSYVLDVLNTLRC-----EKVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              + DS         A YV+MP+R+
Sbjct: 350 ENAEDDS---------AMYVVMPIRL 366


>gi|89052493|ref|YP_507944.1| DNA polymerase III subunit beta [Jannaschia sp. CCS1]
 gi|88862042|gb|ABD52919.1| DNA polymerase III, beta subunit [Jannaschia sp. CCS1]
          Length = 372

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 142/387 (36%), Positives = 228/387 (58%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+++ER+ +L  +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKLSIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGETVSFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++IVRKL DG+ +S  ++    + + I  G S+F L + P  +FP 
Sbjct: 61  VERAGATTVSAVTLHEIVRKLPDGSLVSLTEDT-TTSRLTIEAGRSSFQLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               +Y  +F   +  L+ L +++ FA++TEE RYYLNG++FHI   +    L AVATDG
Sbjct: 120 MASTDYAANFSAKAPELRRLFDKSKFAISTEETRYYLNGVYFHIAEGDNGKALRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +     +MP +IVPRK VGE+ ++L   D+ + VS+SE++I      ++++
Sbjct: 180 HRLARIDSALPDGAQEMPGVIVPRKTVGELRKLLDDDDAQIAVSVSETKIRFATPDITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + + V+  +  +AVD V+ +SS R +AVK++L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPAGNTRRMEVDAGDFAKAVDLVATVSSERSRAVKMALDEDRLMLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+ PD G A   + V Y +  ++I FN KYLLEI   +       +  VF   S      
Sbjct: 300 VNAPDSGNAEAELVVAYADEKLEIGFNAKYLLEIASQVD-----RENAVFMFSSPAEPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R  + DS         A YV+MPMR+
Sbjct: 355 MREGNDDS---------AIYVVMPMRV 372


>gi|170766918|ref|ZP_02901371.1| DNA polymerase III, beta subunit [Escherichia albertii TW07627]
 gi|170124356|gb|EDS93287.1| DNA polymerase III, beta subunit [Escherichia albertii TW07627]
          Length = 366

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALI 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|324111598|gb|EGC05579.1| DNA polymerase III [Escherichia fergusonii B253]
          Length = 366

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  HPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|262392782|ref|YP_003284636.1| DNA polymerase III subunit beta [Vibrio sp. Ex25]
 gi|262336376|gb|ACY50171.1| DNA polymerase III beta subunit [Vibrio sp. Ex25]
          Length = 366

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 221/386 (57%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++LL+  + +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEENVLSMTATDLEVELVSKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDAIITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L+ + L+ L+++T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + + + + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFTFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S +K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQSTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       + V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVTFEGDAIEIGFNVSYVLDVLNTLRC-----ENVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|218708099|ref|YP_002415720.1| DNA polymerase III subunit beta [Vibrio splendidus LGP32]
 gi|218321118|emb|CAV17068.1| DNA polymerase III beta subunit [Vibrio splendidus LGP32]
          Length = 366

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++L++  D +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEDNVLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D + I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDSSVITVVLD---GDRIQVRSGRSRFSLATLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++        +  + L+ L+E+T F+MA +++RYYLNG+ F I  E   L +VATDGH
Sbjct: 118 NIEDWSSEVEVSVTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--EGSILRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQAQLGADFAQ-KQIIVPRKGVQELVKLLDAPEQPVTLQIGNSNVRAEVNNYVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K L   C  LR A  R +I+S+ + + V+++L   ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNTTKTLEAGCDELRSAFSRAAILSNEKFRGVRVNLVDSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++   ++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEVLDVNFDGDALEIGFNVSYVLDVLNTLRC-----EQVRISMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                DS         A YV+MP+R+
Sbjct: 350 ENAQDDS---------AMYVVMPIRL 366


>gi|254490238|ref|ZP_05103428.1| DNA polymerase III, beta subunit [Methylophaga thiooxidans DMS010]
 gi|224464585|gb|EEF80844.1| DNA polymerase III, beta subunit [Methylophaga thiooxydans DMS010]
          Length = 367

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 136/385 (35%), Positives = 219/385 (56%), Gaps = 18/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ TV +  I+  L   C I+ER+ T+P+  +VLL+ +   L + ++  E+E+   +P S
Sbjct: 1   MQFTVSQETIVRPLQLVCSIVERRATLPILSNVLLRVHGNQLSMTSTDMELEMIATLPVS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G ITVSA    DIVR L   A IS    N    +  +  G S F L + P  +FP 
Sbjct: 61  VEEEGKITVSARKFLDIVRALPGNATISL---NAKDNKAVVKAGKSRFSLSTLPSDDFPD 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
           ++   Y+    L  S LK+L++ T FAMA++++RYYLNG+      E+  L AVATDGHR
Sbjct: 118 SEGANYIDEISLPQSALKSLLDETSFAMASQDVRYYLNGLLLE--REETTLRAVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+  +     +A+  S+IVPRKA+ E+ R+L+  D  VK++ S  +I + +  +  + +
Sbjct: 176 LAMGSLTTANPVAEKNSVIVPRKAIIELGRLLNETDDDVKLAFSNQQIKVELPDIHFTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG+FPNY+ V+P   DKE+      L+QA+ R +I+S+ + ++V+++L +D+L  TV 
Sbjct: 236 LIDGQFPNYERVLPLGGDKEVLAERDELKQALSRAAILSNDKHRSVRINLDTDQLKATVT 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N +   A E ++V Y   P++I FN  YLL++++ I      D++V        SS  + 
Sbjct: 296 NQEQESAEEEISVDYKGSPLEIAFNNAYLLDLLNAIP-----DEKVKILFTDETSSALVT 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             D+  +          YV+MPMR+
Sbjct: 351 PADQKFERQ--------YVVMPMRL 367


>gi|16762488|ref|NP_458105.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143976|ref|NP_807318.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56415710|ref|YP_152785.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62182325|ref|YP_218742.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161505632|ref|YP_001572744.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|161616955|ref|YP_001590920.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167548873|ref|ZP_02342632.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168233392|ref|ZP_02658450.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168260378|ref|ZP_02682351.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464832|ref|ZP_02698724.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168818303|ref|ZP_02830303.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194471413|ref|ZP_03077397.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197251713|ref|YP_002148775.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197364638|ref|YP_002144275.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198245644|ref|YP_002217787.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204928586|ref|ZP_03219785.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205354576|ref|YP_002228377.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859063|ref|YP_002245714.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213648785|ref|ZP_03378838.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865135|ref|ZP_03387254.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224585636|ref|YP_002639435.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238913090|ref|ZP_04656927.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289826404|ref|ZP_06545516.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25288590|pir||AB0958 DNA polymerase III beta-chain [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504793|emb|CAD03158.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139612|gb|AAO71178.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56129967|gb|AAV79473.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62129958|gb|AAX67661.1| DNA polymerase III, beta-subunit [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|160866979|gb|ABX23602.1| hypothetical protein SARI_03808 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161366319|gb|ABX70087.1| hypothetical protein SPAB_04776 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194457777|gb|EDX46616.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|195632425|gb|EDX50909.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197096115|emb|CAR61711.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197215416|gb|ACH52813.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197940160|gb|ACH77493.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204322019|gb|EDZ07217.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205274357|emb|CAR39382.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205325570|gb|EDZ13409.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205332539|gb|EDZ19303.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205344390|gb|EDZ31154.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205350419|gb|EDZ37050.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206710866|emb|CAR35230.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224470164|gb|ACN47994.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|320088258|emb|CBY98020.1| DNA polymerase III, beta-subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322617250|gb|EFY14155.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619062|gb|EFY15948.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625129|gb|EFY21957.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630180|gb|EFY26951.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634394|gb|EFY31128.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635279|gb|EFY31994.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642897|gb|EFY39481.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647623|gb|EFY44110.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650571|gb|EFY46978.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656403|gb|EFY52695.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661583|gb|EFY57806.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661664|gb|EFY57883.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668222|gb|EFY64380.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672849|gb|EFY68957.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674970|gb|EFY71056.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683660|gb|EFY79673.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687736|gb|EFY83705.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322716816|gb|EFZ08387.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323192049|gb|EFZ77284.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200531|gb|EFZ85609.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204957|gb|EFZ89942.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206700|gb|EFZ91657.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211772|gb|EFZ96605.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218634|gb|EGA03341.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220035|gb|EGA04505.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224805|gb|EGA09070.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232486|gb|EGA16588.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235261|gb|EGA19346.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241049|gb|EGA25086.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241401|gb|EGA25433.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248632|gb|EGA32562.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252069|gb|EGA35929.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258627|gb|EGA42290.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262342|gb|EGA45900.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268178|gb|EGA51654.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270592|gb|EGA54037.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625573|gb|EGE31918.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629712|gb|EGE36055.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 366

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +  S
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFE--TEGSELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + + A +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPLEASLPSH-SVIVPRKGVIELMRMLDGGENPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYGGTEMEIGFNVSYVLDVLNALKC-----ETVRIMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|16767122|ref|NP_462737.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167992431|ref|ZP_02573529.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168242057|ref|ZP_02666989.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194444384|ref|YP_002043087.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449346|ref|YP_002047870.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|200387477|ref|ZP_03214089.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|3915668|sp|P26464|DPO3B_SALTY RecName: Full=DNA polymerase III subunit beta
 gi|2653647|gb|AAB87631.1| DNA polymerase III beta clamp subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16422411|gb|AAL22696.1| DNA polymerase III, beta-subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194403047|gb|ACF63269.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407650|gb|ACF67869.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|199604575|gb|EDZ03120.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205329442|gb|EDZ16206.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205338833|gb|EDZ25597.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|261248978|emb|CBG26835.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996123|gb|ACY91008.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160370|emb|CBW19895.1| DNA polymerase III beta-subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914967|dbj|BAJ38941.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225555|gb|EFX50610.1| DNA polymerase III beta subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323132198|gb|ADX19628.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332990687|gb|AEF09670.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 366

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +  S
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIESTQFSMAHQDVRYYLNGMLFE--TEGSELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + + A +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPLEASLPSH-SVIVPRKGVIELMRMLDGGENPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYGGTEMEIGFNVSYVLDVLNALKC-----ETVRIMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|304398067|ref|ZP_07379942.1| DNA polymerase III, beta subunit [Pantoea sp. aB]
 gi|304354353|gb|EFM18725.1| DNA polymerase III, beta subunit [Pantoea sp. aB]
          Length = 366

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GS TV A    DI R L DGA+I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  QAHEPGSTTVPARKFLDICRGLPDGAEITLALE---GDRMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMMFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E+LR+L   D+ ++V +  S I  ++     + 
Sbjct: 176 RLAVCSMPI-GQALPSHSVIVPRKGVIELLRLLDGGDTPLQVRIGGSNIRAHVGDYIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L ++ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKVLEAGCDLLKQAFARAAILSNEKFRGVRLYITENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVSYNGTELEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDV---------ASPAAAYVVMPMRL 366


>gi|59710617|ref|YP_203393.1| DNA polymerase III subunit beta [Vibrio fischeri ES114]
 gi|59478718|gb|AAW84505.1| DNA polymerase III, beta subunit [Vibrio fischeri ES114]
          Length = 366

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + ++P+  ++LLQ  +G L + A+  E+E+   I   
Sbjct: 1   MKFSIERSLLLKPLQQVSGALGGRPSLPILGNILLQVENGQLSMTATDLEVELISKITLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G++TV +    DI R L D A I+   E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGAVTVPSRKFLDICRGLPDSANITIVLE---GDRVLVRSGRSRFTLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  E      L+ + L+ L+E T F+MA +++RYYLNG+ F          +VATDGH
Sbjct: 118 NIEGWESEVEITLSQAQLRKLIESTQFSMANQDVRYYLNGMMFETQGNI--FRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  + + +++ +   +I+PRK + E++R+L S + SV +    S +   + +   + 
Sbjct: 176 RMAVCNMPVESELPEQ-QVIMPRKGIQELVRLLDSPEQSVTLQFGNSNVRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S++K L  +C  LRQA  R +I+S+ + + V+++L+++++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSSNKTLEADCDELRQAFARAAILSNEKFRGVRVNLANNQMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       + V   + ++N+S  +
Sbjct: 295 NNPEQEEAEEILDVDFQGDDIEIGFNVSYVLDVLNTLKC-----ERVRISMTTANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D            YV+MP+R+
Sbjct: 350 EDCANDEAQ---------YVVMPIRL 366


>gi|30065009|ref|NP_839180.1| DNA polymerase III subunit beta [Shigella flexneri 2a str. 2457T]
 gi|56480410|ref|NP_709499.2| DNA polymerase III subunit beta [Shigella flexneri 2a str. 301]
 gi|110807609|ref|YP_691129.1| DNA polymerase III subunit beta [Shigella flexneri 5 str. 8401]
 gi|30043270|gb|AAP18991.1| DNA polymerase III, beta-subunit [Shigella flexneri 2a str. 2457T]
 gi|56383961|gb|AAN45206.2| DNA polymerase III, beta-subunit [Shigella flexneri 2a str. 301]
 gi|110617157|gb|ABF05824.1| DNA polymerase III, beta-subunit [Shigella flexneri 5 str. 8401]
 gi|281603072|gb|ADA76056.1| DNA polymerase III, beta-subunit [Shigella flexneri 2002017]
 gi|313647709|gb|EFS12157.1| DNA polymerase III, beta subunit [Shigella flexneri 2a str. 2457T]
 gi|332750522|gb|EGJ80931.1| DNA polymerase III, beta subunit [Shigella flexneri K-671]
 gi|332750693|gb|EGJ81101.1| DNA polymerase III, beta subunit [Shigella flexneri 4343-70]
 gi|332751746|gb|EGJ82144.1| DNA polymerase III, beta subunit [Shigella flexneri 2747-71]
 gi|332764072|gb|EGJ94309.1| DNA polymerase III, beta subunit [Shigella flexneri 2930-71]
 gi|332996041|gb|EGK15668.1| DNA polymerase III, beta subunit [Shigella flexneri VA-6]
 gi|332997108|gb|EGK16724.1| DNA polymerase III, beta subunit [Shigella flexneri K-218]
 gi|333013256|gb|EGK32629.1| DNA polymerase III, beta subunit [Shigella flexneri K-304]
          Length = 366

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNLLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|206578911|ref|YP_002235887.1| DNA polymerase III, beta subunit [Klebsiella pneumoniae 342]
 gi|288932894|ref|YP_003436953.1| DNA polymerase III subunit beta [Klebsiella variicola At-22]
 gi|290511690|ref|ZP_06551058.1| DNA polymerase III, beta subunit [Klebsiella sp. 1_1_55]
 gi|206567969|gb|ACI09745.1| DNA polymerase III, beta subunit [Klebsiella pneumoniae 342]
 gi|288887623|gb|ADC55941.1| DNA polymerase III, beta subunit [Klebsiella variicola At-22]
 gi|289775480|gb|EFD83480.1| DNA polymerase III, beta subunit [Klebsiella sp. 1_1_55]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFE--TEGSELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + + A +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPLEASLPNH-SVIVPRKGVIELMRMLDGGDTPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLDAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGTEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|152972608|ref|YP_001337754.1| DNA polymerase III subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238897211|ref|YP_002921959.1| DNA polymerase III subunit beta [Klebsiella pneumoniae NTUH-K2044]
 gi|262040465|ref|ZP_06013708.1| DNA polymerase III [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330005214|ref|ZP_08305173.1| DNA polymerase III, beta subunit [Klebsiella sp. MS 92-3]
 gi|150957457|gb|ABR79487.1| DNA polymerase III subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238549541|dbj|BAH65892.1| DNA polymerase III subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259042218|gb|EEW43246.1| DNA polymerase III [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328536346|gb|EGF62708.1| DNA polymerase III, beta subunit [Klebsiella sp. MS 92-3]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFE--TEGSELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + + A +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPLEASLPNH-SVIVPRKGVIELMRMLDGGDTPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGTEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|86147176|ref|ZP_01065492.1| DNA polymerase III subunit beta [Vibrio sp. MED222]
 gi|85835060|gb|EAQ53202.1| DNA polymerase III subunit beta [Vibrio sp. MED222]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++L++  D +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEDNVLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D + I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDSSVITVVLD---GDRIQVRSGRSRFSLATLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++        +  + L+ L+E+T F+MA +++RYYLNG+ F I  E   L +VATDGH
Sbjct: 118 NIEDWSSEVEVSVTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--EGSILRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQAQLGADFAQ-KQIIVPRKGVQELVKLLDAPEQPVTLQIGNSNVRAEVNNYVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K L   C  LR A  R +I+S+ + + V+++L   ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNTTKTLEAGCDELRSAFSRAAILSNEKFRGVRVNLVDSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++   ++I FN  Y+L++++ +       ++V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEVLDVTFDGDALEIGFNVSYVLDVLNTLRC-----EQVRISMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                DS         A YV+MP+R+
Sbjct: 350 ENAQDDS---------AMYVVMPIRL 366


>gi|254282661|ref|ZP_04957629.1| DNA polymerase III, beta subunit [gamma proteobacterium NOR51-B]
 gi|219678864|gb|EED35213.1| DNA polymerase III, beta subunit [gamma proteobacterium NOR51-B]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 203/386 (52%), Gaps = 22/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           M  T+ R  +++ L     ++ER+ T+P+  +VLL+     LE+  +  E+E+ G +  A
Sbjct: 1   MNFTIPRDALIKPLNLVAGVVERRQTLPILSNVLLRVEGNRLELTGTDLEVELLGRVDLA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L +G++I+F  ++    +  +  G S F L + P ++FP
Sbjct: 61  EPGEAGEITVPARKLVDICKSLPEGSEINFSVDSG---KATVKAGRSRFTLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  E   S  L  SVLK L++RT FAMA +++RYYLNG+   I     +L  VATDGH
Sbjct: 118 TVESSEGEVSVSLPQSVLKRLIDRTGFAMAQQDVRYYLNGMLLEILGG--RLRMVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+       +      II  +  +   L  L   D  V + +  + +       + + 
Sbjct: 176 RLALCTAQEPVEAGDASVIIPRKGVLE--LARLLEGDGPVTLVIGSNHVRAANLQFTFTS 233

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP Y+ V+P S DK +  +   LRQA  R +I+S+ + + V+L ++ D L +T 
Sbjct: 234 KLVDGKFPEYERVLPKSPDKSVVGDRQTLRQAFTRTAILSNEKYRGVRLKIADDTLEITA 293

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P+++ FN  YLL+++  +      D++V   L  + SS  +
Sbjct: 294 NNPEQEQAEEVVSVEFQGDPLEVGFNVSYLLDVLSVLG-----DEKVRLSLADAASSALL 348

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D           ++ YV+MPMR+
Sbjct: 349 EEAD---------GGDSLYVVMPMRL 365


>gi|319406518|emb|CBI80160.1| DNA polymerase III, beta chain [Bartonella sp. 1-1C]
          Length = 373

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 159/387 (41%), Positives = 246/387 (63%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ RS +L+ L    RI+ER++ IP+  +VL+  +DG +++KA+  ++EI  +   +
Sbjct: 1   MRITIGRSQLLKSLSRVHRIVERRSAIPILSNVLIDTSDGRMQLKATDLDLEIIESSSVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ITV AHLLYDIVRKL D + +      +  + ++I+ G +NF LQ  P+ +FP 
Sbjct: 61  IEQGGAITVPAHLLYDIVRKLPDDSNVILEVNEDQASAMSITSGCTNFQLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++   F L +S LK L++ T FAM+TEE RYYLNGI+FH I+++ LKL  V+TDGH
Sbjct: 121 SLPGQFSCRFSLLASRLKYLLDCTQFAMSTEETRYYLNGIYFHVIDDDILKLRLVSTDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  + +  MP +I+PRK VGE+ ++L  + D+ V + LS+++I  ++ S+ ++
Sbjct: 181 RLAQVDIEAPSGVDGMPGVIIPRKTVGELQKLLGEEADNDVCIELSDTKIRFSVGSVILT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L VN  +   AVDRVS +SS R +AVKL++    + + 
Sbjct: 241 SKLIDGVFPEYQRVIPLGNDKKLIVNRQDFSAAVDRVSTISSDRGRAVKLTIEKGVVKLV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y   P++I FN +YLL+I   +SS     DE++F    S +   
Sbjct: 301 VNNPDSGSAKDQLVANYVFDPLEIGFNSRYLLDIAAQLSS-----DEMIFMFADSGAPTL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IRG D           NA YVLMP+R+
Sbjct: 356 IRGNDD---------KNALYVLMPIRV 373


>gi|15988190|pdb|1JQL|A Chain A, Mechanism Of Processivity Clamp Opening By The Delta
           Subunit Wrench Of The Clamp Loader Complex Of E. Coli
           Dna Polymerase Iii: Structure Of Beta-Delta (1-140)
 gi|16974833|pdb|1JQJ|A Chain A, Mechanism Of Processivity Clamp Opening By The Delta
           Subunit Wrench Of The Clamp Loader Complex Of E. Coli
           Dna Polymerase Iii: Structure Of The Beta-Delta Complex
 gi|16974834|pdb|1JQJ|B Chain B, Mechanism Of Processivity Clamp Opening By The Delta
           Subunit Wrench Of The Clamp Loader Complex Of E. Coli
           Dna Polymerase Iii: Structure Of The Beta-Delta Complex
          Length = 366

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +  S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAAASNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|168235477|ref|ZP_02660535.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194738233|ref|YP_002116781.1| DNA polymerase III subunit beta [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194713735|gb|ACF92956.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197291529|gb|EDY30881.1| DNA polymerase III, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 366

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +  S
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFE--TEGSELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + + A +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPLEASLPSH-SVIVPRKGVIELMRMLDGGENPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYGGMEMEIGFNVSYVLDVLNALKC-----ETVRIMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|268593489|ref|ZP_06127710.1| DNA polymerase III, beta subunit [Providencia rettgeri DSM 1131]
 gi|291310911|gb|EFE51364.1| DNA polymerase III, beta subunit [Providencia rettgeri DSM 1131]
          Length = 366

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ER  +L+ L      +  + T+P+  ++LLQ  +G L++  +  E+E+   +  +
Sbjct: 1   MKFTIEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVKEGTLQLTGTDLEMEMMANVALT 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ TV A   +DI R L +G++I     ++    + +  G S F L + P ++FP
Sbjct: 61  GEHEIGATTVPARKFFDIWRGLPEGSEIHVELNDD---RLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S+LK L+E T F+MA +++RYYLNG+ F    ED  L  V+TDGH
Sbjct: 118 NLDDWQSEVEFSLPQSILKRLIEATQFSMAHQDVRYYLNGMLFE--TEDQMLRTVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +DI  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMDI-GQSLPSHSVIVPRKGVIELMRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEARCDLLKQAFSRAAILSNEKFRGVRLYFSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ + S     + V   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVSYQGTEMEIGFNVSYILDVLNALKS-----ENVQLLLTDAVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D  +         A YV+MPMR+
Sbjct: 350 EDADSKA---------AVYVVMPMRL 366


>gi|308188764|ref|YP_003932895.1| DNA polymerase III, beta-subunit [Pantoea vagans C9-1]
 gi|308059274|gb|ADO11446.1| DNA polymerase III, beta-subunit [Pantoea vagans C9-1]
          Length = 384

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 132/386 (34%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +   
Sbjct: 19  MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALT 78

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GS TV A    DI R L DGA+I+   E   G  + +  G S F L + P S+FP
Sbjct: 79  QAHEPGSTTVPARKFLDICRGLPDGAEITLALE---GDRMLVRSGRSRFSLSTLPASDFP 135

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 136 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMMFETEGE--ELRTVATDGH 193

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E+LR+L   ++ ++V +  S I  ++     + 
Sbjct: 194 RLAVCSMPI-GQALPSHSVIVPRKGVIELLRLLDGGENPLQVQIGGSNIRAHVGDYIFTS 252

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L ++ ++L +T 
Sbjct: 253 KLVDGRFPDYRRVLPKNPDKALEAGCDLLKQAFARAAILSNEKFRGVRLYITENQLKITA 312

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 313 NNPEQEEAEEMLDVSYNGTELEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 367

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 368 EDV---------ASPAAAYVVMPMRL 384


>gi|156972778|ref|YP_001443685.1| DNA polymerase III subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|156524372|gb|ABU69458.1| hypothetical protein VIBHAR_00443 [Vibrio harveyi ATCC BAA-1116]
          Length = 366

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 218/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++LL+  + +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEENVLSMTATDLEVELVSKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D + I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDSIITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  S L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQSDLRTLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S +K L   C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQSTNKTLETGCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       D V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVTFEGDAIEIGFNVSYVLDVLNTLRC-----DNVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|148555705|ref|YP_001263287.1| DNA polymerase III subunit beta [Sphingomonas wittichii RW1]
 gi|148500895|gb|ABQ69149.1| DNA polymerase III, beta subunit [Sphingomonas wittichii RW1]
          Length = 370

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 154/387 (39%), Positives = 233/387 (60%), Gaps = 19/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ LGH   ++ER+NTIP+  +VL++A  +G L + A+  +++I  A+PA
Sbjct: 1   MKATIERATLLKSLGHVQSVVERRNTIPILSNVLIEATAEGTLRLMATDLDLQIVEAVPA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +VD  G+ TVSAH L+DI RKL +G+Q+          ++ +  G + F LQ+ P+ +FP
Sbjct: 61  AVDQPGATTVSAHTLFDIARKLPEGSQVQLSA---AEGKMQVVAGRARFNLQTLPKDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDG 178
              E E    FEL +  LK L+++T FA++TEE RYYLNGIFFH  +E    L A ATDG
Sbjct: 118 MIAEGELPTRFELPAETLKQLIDKTRFAISTEETRYYLNGIFFHVQDEGSPVLKAAATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   +        MP II+PRK VGE+ ++L   D SV ++LS ++I   + +  ++
Sbjct: 178 HRLARVTIARPDGAEGMPDIIIPRKCVGELRKLLDEVDGSVDITLSSTKIRFGLGTAILT 237

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDK L+++  +  + VDRV+ ++S + +AVK++L  DK+ ++
Sbjct: 238 SKLIDGTFPDYNRVIPTANDKLLKIDPKSFMEGVDRVATIASEKTRAVKMALDRDKITLS 297

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V +P+ G A E +   Y     +I FN +YLL+I+  I       D V   L  + +   
Sbjct: 298 VTSPENGTAAEEVPGDYAATGFEIGFNARYLLDILGQIDG-----DTVEVHLADAAAPTL 352

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR  DK           A YVLMPMR+
Sbjct: 353 IRENDKAP---------ALYVLMPMRV 370


>gi|332997867|gb|EGK17475.1| DNA polymerase III, beta subunit [Shigella flexneri K-272]
 gi|333013662|gb|EGK33027.1| DNA polymerase III, beta subunit [Shigella flexneri K-227]
          Length = 366

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  HPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNLLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|269962692|ref|ZP_06177037.1| DNA polymerase III, beta chain [Vibrio harveyi 1DA3]
 gi|269832615|gb|EEZ86729.1| DNA polymerase III, beta chain [Vibrio harveyi 1DA3]
          Length = 366

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 218/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++L++  + +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEENVLSMTATDLEVELVSKVALE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D + I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDSIITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  S L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQSDLRTLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S  K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSTTKTLEASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       D V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVTFEGDAIEIGFNVSYVLDVLNTLRC-----DNVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|28867245|ref|NP_789864.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213968440|ref|ZP_03396583.1| DNA polymerase III, beta subunit [Pseudomonas syringae pv. tomato
           T1]
 gi|301384272|ref|ZP_07232690.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063878|ref|ZP_07255419.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. tomato
           K40]
 gi|302131961|ref|ZP_07257951.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|28850479|gb|AAO53559.1| DNA polymerase III, beta subunit [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213926728|gb|EEB60280.1| DNA polymerase III, beta subunit [Pseudomonas syringae pv. tomato
           T1]
 gi|331017724|gb|EGH97780.1| DNA polymerase III subunit beta [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 367

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +  +LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQSLREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEIGVEYNGEALEIGFNVSYLLDVLSVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|121587274|ref|ZP_01677047.1| DNA polymerase III, beta chain [Vibrio cholerae 2740-80]
 gi|261213262|ref|ZP_05927544.1| DNA polymerase III beta subunit [Vibrio sp. RC341]
 gi|121548520|gb|EAX58576.1| DNA polymerase III, beta chain [Vibrio cholerae 2740-80]
 gi|260837536|gb|EEX64239.1| DNA polymerase III beta subunit [Vibrio sp. RC341]
          Length = 366

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  D  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEDNQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|256821230|ref|YP_003145193.1| DNA polymerase III subunit beta [Kangiella koreensis DSM 16069]
 gi|256794769|gb|ACV25425.1| DNA polymerase III, beta subunit [Kangiella koreensis DSM 16069]
          Length = 367

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 202/386 (52%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L  L      +E++ T+PV  +VL+  +D  L + A+  E+E+   +   
Sbjct: 1   MRFTISRDQLLAPLQLVSGAVEKRQTLPVLSNVLMVVDDSKLSLTATDLEVELKAQVDLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G ITV A  L DIVR L DG  +      +  T + +    S F L +   +EFP
Sbjct: 61  GEFEPGEITVPARKLLDIVRSLGDGENVKI---EQSETRLKVITPSSRFSLSTMSANEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  E   + S EL   VLK+L+E+T FAMA +++RYYLNG+ F  + +  KL  VATDGH
Sbjct: 118 NLDETVSLASLELTQDVLKSLIEKTQFAMAQQDVRYYLNGMLFEFDND--KLTTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++            S I+PRK V E+ R+L   D ++ ++L  + I +     S + 
Sbjct: 176 RLALSRAKASIDADDKISAIIPRKGVTELARLLEHSDDNITLNLGSNHIKVIGPDYSFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP Y+ V+P + DK +  +    ++++ R SI+ + + + V+  L+++++ +  
Sbjct: 236 KLVDGRFPEYEKVLPRNGDKIVIADRELFKESLSRASILCNEKFRGVRFMLTNEQVRLHA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A     V Y    ++I FN  Y++++++ I +      +V      +NSS  I
Sbjct: 296 NNPEQEEAEVEFGVDYQGSDLEIGFNVSYMIDVMNTIKT-----PQVKLTFIDANSSTLI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D            + YV+MPMR+
Sbjct: 351 EEVD---------GGESVYVVMPMRL 367


>gi|254225545|ref|ZP_04919154.1| DNA polymerase III, beta chain [Vibrio cholerae V51]
 gi|125621865|gb|EAZ50190.1| DNA polymerase III, beta chain [Vibrio cholerae V51]
          Length = 366

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 217/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   +K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTNKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       + V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----ENVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|260595831|ref|YP_003208402.1| DNA polymerase III subunit beta [Cronobacter turicensis z3032]
 gi|260215008|emb|CBA26670.1| DNA polymerase III subunit beta [Cronobacter turicensis z3032]
          Length = 366

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +S G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLD---GDRMRVSSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E   L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--DLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPVGQPLPNH-SVIVPRKGVLELMRMLDGGDAPLRIQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYPGTEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASSSAA---------YVVMPMRL 366


>gi|283787599|ref|YP_003367464.1| DNA polymerase III beta-subunit [Citrobacter rodentium ICC168]
 gi|282951053|emb|CBG90731.1| DNA polymerase III beta-subunit [Citrobacter rodentium ICC168]
          Length = 366

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALI 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QAHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ + V +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLHVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYPGTEMEIGFNVSYVLDVLNALKC-----ETVRIMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|329847539|ref|ZP_08262567.1| DNA polymerase III, beta subunit [Asticcacaulis biprosthecum C19]
 gi|328842602|gb|EGF92171.1| DNA polymerase III, beta subunit [Asticcacaulis biprosthecum C19]
          Length = 373

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 136/387 (35%), Positives = 220/387 (56%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ER  +L+ LGH   ++ER+NTIP+  +VLL A  G +   A+  ++EI     A+
Sbjct: 1   MQFTIERGALLKALGHVQNVVERRNTIPILSNVLLSAERGQVSFSATDLDMEIVDTAEAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V V G IT  AH LY+IVRKL DGA +           + +S G S F L   P  +FP 
Sbjct: 61  VSVPGQITAPAHTLYEIVRKLPDGADVELKFSAGDDPRLAVSAGRSRFALPVLPAGDFPI 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
              +    SF +    LK L+++T FA++TEE RYYLNG++ H    +    L AVATDG
Sbjct: 121 MSSDHEGVSFSILRDDLKRLIDKTRFAVSTEETRYYLNGMYLHTLSEDGSNYLRAVATDG 180

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE+      A  P +I+PRK + +  R+L      V++++S ++I   + + S++
Sbjct: 181 HRLALAEMPAPEGSAGGPGVIIPRKTIDQARRLLDDGTGYVELTISPAKIRFQLGNASLT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +NDK + ++   L +AVDRVS +S+ + ++VK+++   +L ++
Sbjct: 241 SKIIDGSFPDYGRVIPKNNDKVMMIDTGILAKAVDRVSTISAEKSRSVKMAIEPGRLTLS 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A+E   + Y+   +DI FN +Y+L+++  I       ++V  R   ++S   
Sbjct: 301 VRNIEAGQAVEEAEIDYDNDSIDIGFNARYILDVMGQIGG-----EQVELRFADASSPTL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +     +            YVLMP+R+
Sbjct: 356 VLDPADNGVQ---------YVLMPLRV 373


>gi|163849459|ref|YP_001637502.1| DNA polymerase III subunit beta [Methylobacterium extorquens PA1]
 gi|163661064|gb|ABY28431.1| DNA polymerase III, beta subunit [Methylobacterium extorquens PA1]
          Length = 373

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 173/388 (44%), Positives = 238/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++TVER+ +L+ LGH  R++ER+NTIP+  +VLL+  +  L++KA+  +IE+T  + A 
Sbjct: 1   MRVTVERAALLKSLGHVHRVVERRNTIPILSNVLLRTGENGLQLKATDLDIEVTETVAAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH++YDIVRKL +GAQ+S     E G ++ I  G S F L + PE +FP 
Sbjct: 61  VLDAGATTVPAHVIYDIVRKLPEGAQVSLETSGETG-QMTIRSGRSRFALGALPEGDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF + ++ LK L+E+T FA++TEE RYYLNGI+FH    E  LKL AVATDG
Sbjct: 120 LAAGELPHSFAIPAAELKQLIEKTQFAISTEETRYYLNGIYFHTLEVEGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI-ESLSM 237
           HRLA  E D       MP IIVPRKAV EI +++     SV+V LS ++I L     + +
Sbjct: 180 HRLARVETDAPEGSRGMPGIIVPRKAVAEIQKLVDDGGESVQVELSPAKIRLTFAGGVIL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP  NDK L V      +AVDRVS +SS R +AVKL++S  +L +
Sbjct: 240 ISKLIDGTFPDYQRVIPTGNDKRLTVERDAFAKAVDRVSTISSERGRAVKLAVSEGRLAL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V NPD G A E ++V Y    +DI FN +YLL+I   +       D  +F+L    S  
Sbjct: 300 SVTNPDAGSATEELDVDYEASALDIGFNARYLLDITAQLQG-----DTALFKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I+ +D            A YVLMPMR+
Sbjct: 355 LIQDRDGAP---------ALYVLMPMRV 373


>gi|188579289|ref|YP_001922734.1| DNA polymerase III subunit beta [Methylobacterium populi BJ001]
 gi|179342787|gb|ACB78199.1| DNA polymerase III, beta subunit [Methylobacterium populi BJ001]
          Length = 373

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 173/388 (44%), Positives = 238/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++TVER+ +L  LGH  R++ER+NTIP+  +VLL+  D  L++KA+  +IE+T  + A 
Sbjct: 1   MRVTVERAALLRSLGHVHRVVERRNTIPILSNVLLRTGDNGLQLKATDLDIEVTETVAAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH++YDIVRKL +GAQ+S     E G ++ I  G S F L + PE +FP 
Sbjct: 61  VLDAGATTVPAHVIYDIVRKLPEGAQVSLETSGETG-QMTIRSGRSRFALGALPEGDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF + +S LK L+E+T FA++TEE RYYLNGI+FH    E  LKL AVATDG
Sbjct: 120 LAAGELPHSFSIPASELKQLIEKTQFAISTEETRYYLNGIYFHTVEVEGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI-ESLSM 237
           HRLA  E +       MP IIVPRKAV EI +++     SV+V LS ++I L     +++
Sbjct: 180 HRLARVETEAPEDSRGMPGIIVPRKAVAEIQKLVDDGGESVQVELSPAKIRLTFAGGVTL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP  NDK L V      +AVDRVS +SS R +AVKL+++  +L +
Sbjct: 240 ISKLIDGTFPDYQRVIPTGNDKRLTVERDAFAKAVDRVSTISSERGRAVKLAVAEGRLAL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V NPD G A E ++V Y    +DI FN +YLL+I   +       D  +F+L    S  
Sbjct: 300 SVTNPDAGSATEELDVDYEASALDIGFNARYLLDITAQLQG-----DTALFKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I+ +D            A YVLMPMR+
Sbjct: 355 LIQDRDGAP---------ALYVLMPMRV 373


>gi|218528085|ref|YP_002418901.1| DNA polymerase III subunit beta [Methylobacterium chloromethanicum
           CM4]
 gi|240136785|ref|YP_002961252.1| DNA polymerase III, beta-subunit [Methylobacterium extorquens AM1]
 gi|254558655|ref|YP_003065750.1| DNA polymerase III, beta-subunit [Methylobacterium extorquens DM4]
 gi|218520388|gb|ACK80973.1| DNA polymerase III, beta subunit [Methylobacterium chloromethanicum
           CM4]
 gi|240006749|gb|ACS37975.1| DNA polymerase III, beta-subunit [Methylobacterium extorquens AM1]
 gi|254265933|emb|CAX21682.1| DNA polymerase III, beta-subunit [Methylobacterium extorquens DM4]
          Length = 373

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 172/388 (44%), Positives = 238/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++TVER+ +L+ LGH  R++ER+NTIP+  +VLL+  +  L++KA+  +IE+T  + A 
Sbjct: 1   MRVTVERAALLKSLGHVHRVVERRNTIPILSNVLLRTGENGLQLKATDLDIEVTETVAAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH++YDIVRKL +GAQ+S     E G ++ I  G S F L + PE +FP 
Sbjct: 61  VLDAGATTVPAHVIYDIVRKLPEGAQVSLETSGETG-QMTIRSGRSRFALGALPEGDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  +SF + ++ LK L+E+T FA++TEE RYYLNGI+FH    E  LKL AVATDG
Sbjct: 120 LAAGELPHSFAIPAAELKQLIEKTQFAISTEETRYYLNGIYFHTLEVEGALKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI-ESLSM 237
           HRLA  E +       MP IIVPRKAV EI +++     SV+V LS ++I L     + +
Sbjct: 180 HRLARVETEAPEGSRGMPGIIVPRKAVAEIQKLVDDGGESVQVELSPAKIRLTFAGGVIL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP  NDK L V      +AVDRVS +SS R +AVKL++S  +L +
Sbjct: 240 ISKLIDGTFPDYQRVIPTGNDKRLTVERDAFAKAVDRVSTISSERGRAVKLAVSEGRLAL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V NPD G A E ++V Y    +DI FN +YLL+I   +       D  +F+L    S  
Sbjct: 300 SVTNPDAGSATEELDVDYEASALDIGFNARYLLDITAQLQG-----DTALFKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I+ +D            A YVLMPMR+
Sbjct: 355 LIQDRDGAP---------ALYVLMPMRV 373


>gi|332187226|ref|ZP_08388965.1| DNA polymerase III, beta subunit [Sphingomonas sp. S17]
 gi|332012647|gb|EGI54713.1| DNA polymerase III, beta subunit [Sphingomonas sp. S17]
          Length = 380

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 155/388 (39%), Positives = 230/388 (59%), Gaps = 20/388 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L+ L H   ++ER+NTIP+  +VLL+A  +G L + A+  +++I  ++ A
Sbjct: 10  MKATIERATLLKGLSHVQSVVERRNTIPILSNVLLEATAEGQLRMMATDLDLQINDSVAA 69

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +VD  GS TVSAH L+DI RKL +GAQ+           + I  G + F L + P  +FP
Sbjct: 70  AVDQPGSTTVSAHTLFDIARKLPEGAQVQLTA---AEGRMTIVAGRARFSLGTLPRDDFP 126

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATD 177
              E E    FEL   +LK ++++T FA++TEE RYYLNGIF H+ E++    L A ATD
Sbjct: 127 VIAEGELPTQFELPVELLKQIIDKTRFAISTEETRYYLNGIFLHVAEDNGAPVLKAAATD 186

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA   ++       MP +IVPRK V E+ ++L   D SV VSLS ++I  ++    +
Sbjct: 187 GHRLARVTIERPNGAEGMPDVIVPRKCVAELRKLLDEVDGSVGVSLSGTKIRFDLGQAIL 246

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP+Y  VIP +NDK L+++     Q VDRVS +++ + +AVK++L  D++ +
Sbjct: 247 TSKLIDGTFPDYSRVIPTANDKILKLDPKAFMQGVDRVSTIATEKTRAVKMALDRDRITL 306

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V +P+ G A E +   Y   P +I FN +YLL+I+  I S     D V   L  + +  
Sbjct: 307 SVTSPENGTASEEVPGEYTSLPFEIGFNSRYLLDILGQIDS-----DLVEVHLADAAAPT 361

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            IR  DK           A YVLMPMR+
Sbjct: 362 LIRENDKAP---------ALYVLMPMRV 380


>gi|237729023|ref|ZP_04559504.1| DNA polymerase III subunit beta [Citrobacter sp. 30_2]
 gi|226909645|gb|EEH95563.1| DNA polymerase III subunit beta [Citrobacter sp. 30_2]
          Length = 366

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALI 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPVGQPLPSH-SVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYPGTELEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|304319870|ref|YP_003853513.1| DNA polymerase III subunit beta [Parvularcula bermudensis HTCC2503]
 gi|303298773|gb|ADM08372.1| DNA polymerase III subunit beta [Parvularcula bermudensis HTCC2503]
          Length = 373

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 145/388 (37%), Positives = 230/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ER+ +L+ L H   ++ER+NTIP+  +VL++A  G L + A+  +IEI   +PA 
Sbjct: 1   MQVTIERATLLKALHHTQSVVERRNTIPILSNVLMRAQGGSLALTATDLDIEIAETVPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G +T SA  LYDIV++L DG QIS  K +     + +  G S F L   P+ +FP+
Sbjct: 61  IAEEGGVTASAVTLYDIVKRLPDGGQISLNKSSGSS-RLMLKSGRSEFQLSILPDDDFPT 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH---INEEDLKLCAVATD 177
             +E    +F +++  L  L++RT FAM+ EE RYYLNG++ H     E    L AVATD
Sbjct: 120 LSDEAAGATFTISADALGRLLDRTRFAMSQEETRYYLNGVYLHALTEGEGAPSLRAVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +  +      +P +I+PRKAV E+ R+L   D  V V+++ ++I      + +
Sbjct: 180 GHRLARLDSPLPPGAEAIPGVIIPRKAVLELRRLLDDADGDVAVTVTPAKIRFAFGDIVL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP  ND+ ++V+    R+AVDRVS +S+ + ++VKLSL+ D+L +
Sbjct: 240 VSKLIDGTFPDYQRVIPSGNDRVMKVDNDAFRRAVDRVSTVSADKTRSVKLSLTEDQLTL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
            V+NP+ G A + ++V +    +++ FN +YLL+I D IS      +  VF    + S  
Sbjct: 300 LVNNPETGSATDELSVDFKSTDLEVGFNARYLLDIADQISG-----ETAVFHFADAASPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +  ++ +          A YVLMP+R+
Sbjct: 355 LVTDEEDE---------GALYVLMPLRV 373


>gi|153212930|ref|ZP_01948524.1| DNA polymerase III, beta chain [Vibrio cholerae 1587]
 gi|229520185|ref|ZP_04409612.1| DNA polymerase III beta subunit [Vibrio cholerae TM 11079-80]
 gi|254291126|ref|ZP_04961923.1| DNA polymerase III, beta chain [Vibrio cholerae AM-19226]
 gi|124116156|gb|EAY34976.1| DNA polymerase III, beta chain [Vibrio cholerae 1587]
 gi|150422971|gb|EDN14921.1| DNA polymerase III, beta chain [Vibrio cholerae AM-19226]
 gi|229342779|gb|EEO07770.1| DNA polymerase III beta subunit [Vibrio cholerae TM 11079-80]
          Length = 366

 Score =  276 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|91228347|ref|ZP_01262275.1| DNA polymerase III subunit beta [Vibrio alginolyticus 12G01]
 gi|91188107|gb|EAS74411.1| DNA polymerase III subunit beta [Vibrio alginolyticus 12G01]
          Length = 366

 Score =  276 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 221/386 (57%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++LL+  + +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEENVLSMTATDLEVELVSKVMLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D A I+F  E   G  V +  G S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDAIITFVLE---GDRVQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L+ + L+ L+++T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLSQADLRTLIDKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK V E+++++ + +  V + +  S +   + + + + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGVQELVKLMDAPEQPVVLQIGSSNVRAEVNNFTFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S +K L  +C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQSTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLADTEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       + V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVTFEGDAIEIGFNVSYVLDVLNTLRC-----ENVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|258622959|ref|ZP_05717974.1| DNA polymerase III, beta chain [Vibrio mimicus VM573]
 gi|258626083|ref|ZP_05720934.1| DNA polymerase III, beta chain [Vibrio mimicus VM603]
 gi|262172779|ref|ZP_06040457.1| DNA polymerase III beta subunit [Vibrio mimicus MB-451]
 gi|258581609|gb|EEW06507.1| DNA polymerase III, beta chain [Vibrio mimicus VM603]
 gi|258584742|gb|EEW09476.1| DNA polymerase III, beta chain [Vibrio mimicus VM573]
 gi|261893855|gb|EEY39841.1| DNA polymerase III beta subunit [Vibrio mimicus MB-451]
          Length = 366

 Score =  276 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       + V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----ENVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|317046240|ref|YP_004113888.1| DNA polymerase III subunit beta [Pantoea sp. At-9b]
 gi|316947857|gb|ADU67332.1| DNA polymerase III, beta subunit [Pantoea sp. At-9b]
          Length = 366

 Score =  276 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ N+G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVNEGTLLLTGTDLEMEMVARVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A    DI R L DGA+I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  QPHEPGATTVPARKFLDICRGLPDGAEITLTLE---GDRMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   ++ ++V +  S I  ++     + 
Sbjct: 176 RLAVCSMPI-GQALPNHSVIVPRKGVIELVRLLDGGETPLQVQIGSSNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V++ ++ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKALEAGCDLLKQAFARAAILSNEKFRGVRIYITENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVSYNGSELEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDV---------ASPAAAYVVMPMRL 366


>gi|153802490|ref|ZP_01957076.1| DNA polymerase III, beta chain [Vibrio cholerae MZO-3]
 gi|229530201|ref|ZP_04419590.1| DNA polymerase III beta subunit [Vibrio cholerae 12129(1)]
 gi|262402081|ref|ZP_06078645.1| DNA polymerase III beta subunit [Vibrio sp. RC586]
 gi|124121960|gb|EAY40703.1| DNA polymerase III, beta chain [Vibrio cholerae MZO-3]
 gi|229332334|gb|EEN97821.1| DNA polymerase III beta subunit [Vibrio cholerae 12129(1)]
 gi|262351727|gb|EEZ00859.1| DNA polymerase III beta subunit [Vibrio sp. RC586]
 gi|327482926|gb|AEA77333.1| DNA polymerase III beta subunit [Vibrio cholerae LMA3894-4]
          Length = 366

 Score =  276 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|297581953|ref|ZP_06943873.1| DNA polymerase subunit III [Vibrio cholerae RC385]
 gi|297533820|gb|EFH72661.1| DNA polymerase subunit III [Vibrio cholerae RC385]
          Length = 366

 Score =  276 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK   E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGGLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|220920056|ref|YP_002495357.1| DNA polymerase III subunit beta [Methylobacterium nodulans ORS
           2060]
 gi|219944662|gb|ACL55054.1| DNA polymerase III, beta subunit [Methylobacterium nodulans ORS
           2060]
          Length = 373

 Score =  276 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 169/388 (43%), Positives = 240/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++TVER+ +L  LGH  R++ER+NTIP+  +VLL+++   L++KA+  +IE+T  IPA 
Sbjct: 1   MRVTVERAALLRSLGHVHRVVERRNTIPILSNVLLRSSADGLQLKATDLDIEVTETIPAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH++YDIVRKL +GAQ+S     + G ++ I  G S F L + PE++FP 
Sbjct: 61  VADGGATTVPAHVIYDIVRKLPEGAQVSLETTGDTG-QMLIRSGRSRFTLGALPETDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  + F+L ++ LK L+++T FA++TEE RYYLNGIFFH    E  +KL AVATDG
Sbjct: 120 LAAGELPHRFQLQAAELKKLIDKTQFAISTEETRYYLNGIFFHTIEAEGGVKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES-LSM 237
           HRLA  E+        MP IIVPRKAV EI +++     SV V +S +++     + + +
Sbjct: 180 HRLARVEMPAPEGSHGMPGIIVPRKAVAEIQKLVEDGGDSVGVEISSAKVRFTFSTGVML 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP  NDK L V      +AVDRVS +SS R +AVKL+++  +L +
Sbjct: 240 ISKLIDGTFPDYQRVIPTGNDKLLTVERDQFAKAVDRVSTISSERGRAVKLAVAGGRLSL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+NPD G A E ++  Y   P+DI FN +YLL+I   +       D  +F+L    S  
Sbjct: 300 SVNNPDSGSATEELDADYEAAPLDIGFNARYLLDITAQLDG-----DTALFKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I+ KD            A YVLMPMR+
Sbjct: 355 LIQDKDGAP---------ALYVLMPMRV 373


>gi|283836134|ref|ZP_06355875.1| hypothetical protein CIT292_10555 [Citrobacter youngae ATCC 29220]
 gi|291068323|gb|EFE06432.1| DNA polymerase III, beta subunit [Citrobacter youngae ATCC 29220]
          Length = 366

 Score =  276 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALI 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPVGQPLPSH-SVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYPGTELEIGFNVSYVLDVLNALKC-----ENVRIMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|114568556|ref|YP_755236.1| DNA polymerase III subunit beta [Maricaulis maris MCS10]
 gi|114339018|gb|ABI64298.1| DNA polymerase III, beta subunit [Maricaulis maris MCS10]
          Length = 372

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 217/387 (56%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH   ++E++NTIP+  +VL+ A        A+  +IEI     AS
Sbjct: 1   MKLTIERATLLKALGHVQAVVEKRNTIPILSNVLISAGPDGASFAATDLDIEILETTDAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
            D  G +T  AH LYDI RKL DGA ++          + +  G S+F L S P  +FP 
Sbjct: 61  CDGEGLVTAPAHTLYDITRKLPDGADVTLEMNG-SDPRLTLKAGRSSFSLPSLPPGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
              E+  + F++ +  L  L+++T FA++TEE RYYLNGI  H    +    L AVATDG
Sbjct: 120 MPTEDLEHRFQVPARELARLIDKTRFAISTEETRYYLNGIHLHAADQDGRKTLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
            RLA+AEVD+      MP +IVPRK V E+ R+L   D  V+VS+SE +I   +    ++
Sbjct: 180 VRLALAEVDLPDGADGMPGVIVPRKTVQEVKRLLEDADDDVEVSVSEGKIRFRLGRAVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ VIP  N + + V      +AVDRV+ +S  + ++VKLSL +D L + 
Sbjct: 240 SKLIDGAFPDYERVIPRGNTRLMSVENKRFAEAVDRVATISVEKSRSVKLSLGADALTLA 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NP+ G+A E + V Y++    I FN +Y+L++   I       DE  F    + S   
Sbjct: 300 VNNPESGQAEEELAVSYSDEGFAIGFNARYMLDVASQIEG-----DEARFHFADAASPAL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +               +A YVLMP+R+
Sbjct: 355 VTDSGD---------PDALYVLMPLRV 372


>gi|294085124|ref|YP_003551884.1| DNA polymerase III subunit beta [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664699|gb|ADE39800.1| DNA polymerase III, beta subunit [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 367

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 149/385 (38%), Positives = 233/385 (60%), Gaps = 18/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+ ++R  +L  LGH   ++ER+NTIP+  +V+L+A DG L + A+  +++IT  +  +
Sbjct: 1   MKLAIDRMSLLRPLGHVQSVVERRNTIPILANVVLRAEDGQLSLTATDMDMDITTEVGCA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ T+SAH+LYDIVRKL DG+++     +       IS G S+F L + P  +FP+
Sbjct: 61  VATAGTTTMSAHMLYDIVRKLPDGSEVELSVGDGHAM---ISAGRSSFRLPTLPVEDFPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               E   +F L ++  ++L++ T FA++TEE RYYLNGI+ H + +   LCAVATDGHR
Sbjct: 118 ISSNELPTNFVLTAADFRDLIDATKFAISTEETRYYLNGIYLHKS-DAGDLCAVATDGHR 176

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ +  +    A+MPSII+PRKAVGE+ ++L   D  V +S+SE+R      ++ ++ +
Sbjct: 177 LAMTKQTLPGGAAQMPSIILPRKAVGELRKLLDDYDGDVTISMSETRAEFAFGAVRLTTK 236

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+Y  VIP +NDK ++V+      AVDRVS +SS + ++VK+ L +  + ++  
Sbjct: 237 LIDGTFPDYTRVIPTNNDKIMQVDVGAFSAAVDRVSTISSEKSKSVKIGLRAGVMTLSAS 296

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N D   A E + V Y+   M+I FN +YLL+I   ++S     + V F L    S   +R
Sbjct: 297 NTDASSATEELEVSYSGNEMEIGFNARYLLDIASQVNS-----EMVEFALADQGSPTLVR 351

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
               D+         + +VLMPMR+
Sbjct: 352 TPGDDA---------SLFVLMPMRV 367


>gi|257485598|ref|ZP_05639639.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289628213|ref|ZP_06461167.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649103|ref|ZP_06480446.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330870076|gb|EGH04785.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|331011886|gb|EGH91942.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 367

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYNGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|66043273|ref|YP_233114.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. syringae
           B728a]
 gi|302185841|ref|ZP_07262514.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. syringae
           642]
 gi|63253980|gb|AAY35076.1| DNA polymerase III, beta chain [Pseudomonas syringae pv. syringae
           B728a]
 gi|330976403|gb|EGH76460.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 367

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 214/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFTLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D +V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGTVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L+S +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYNGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|157144343|ref|YP_001451662.1| DNA polymerase III subunit beta [Citrobacter koseri ATCC BAA-895]
 gi|157081548|gb|ABV11226.1| hypothetical protein CKO_00047 [Citrobacter koseri ATCC BAA-895]
          Length = 366

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALI 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPVGQSLPNH-SVIVPRKGVIELMRMLDGGETPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYGGTEMEIGFNVSYVLDVLNALKC-----ETVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|294638326|ref|ZP_06716579.1| DNA polymerase III, beta subunit [Edwardsiella tarda ATCC 23685]
 gi|291088579|gb|EFE21140.1| DNA polymerase III, beta subunit [Edwardsiella tarda ATCC 23685]
          Length = 366

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +++ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +P S
Sbjct: 1   MKFIVEREHLIKPLQQVSSPLGGRPTLPILGNLLLQVEDGHLSLTGTDLEMEMVARVPLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A    DI R L DGA+IS   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEAGATTVPARKFLDICRGLPDGAEISVALD---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   ++ +++ +  + +  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPHHSVIVPRKGVIELMRLLDGGETPLRLQIGSNNLRAHVGGFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDELKQAFARAAILSNEKFRGVRLHVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + VV  L  + SSV I
Sbjct: 295 NNPEQEEAEELLDVNYPGSDLEIGFNVSYVLDVLNALKC-----ERVVMMLTDAVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDA---------ASQAAVYVVMPMRL 366


>gi|156936081|ref|YP_001439997.1| DNA polymerase III subunit beta [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156534335|gb|ABU79161.1| hypothetical protein ESA_03975 [Cronobacter sakazakii ATCC BAA-894]
          Length = 366

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +S G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLD---GDRMRVSSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E   L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--DLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMPVGQPLPNH-SVIVPRKGVLELMRMLDGGDAPLRIQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGAEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASSSAA---------YVVMPMRL 366


>gi|329894831|ref|ZP_08270631.1| DNA polymerase III beta subunit [gamma proteobacterium IMCC3088]
 gi|328922725|gb|EGG30059.1| DNA polymerase III beta subunit [gamma proteobacterium IMCC3088]
          Length = 375

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 123/393 (31%), Positives = 211/393 (53%), Gaps = 26/393 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ER  +++ L     ++ER+ T+P+  +VL+      L +  +  E+E+TG +   
Sbjct: 1   MKFSIEREALVKPLSLVAGVVERRQTLPILANVLVNVEGSQLSLVGTDLEVELTGRVTLE 60

Query: 61  VDVC--GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
                 GS+TV    L+DI + L DG+ I   ++   G ++ +  G S F L + P +EF
Sbjct: 61  DSDSVSGSVTVPGRKLFDICKSLPDGSVIELAQD---GAKLVVKSGRSRFSLATLPATEF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P         S  +    LK L+E+T FAMA +++RYYLNG+ + +N    +   VATDG
Sbjct: 118 PLVDSLNVRGSMTVDQQALKALIEQTGFAMAQQDVRYYLNGMLWELNAN--QFRVVATDG 175

Query: 179 HRLAVAEVDIVAQI------AKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI 232
           HRLA + + +   +           II+PRK V E+ R+L   D+  +V+L ++ + +  
Sbjct: 176 HRLATSHIVLSEGVVQGLSGPDATQIILPRKGVLELSRLLQPGDAPAEVALGDNHLKVET 235

Query: 233 ESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSS 292
            S +   +L+DG+FP+YQ V+P ++ K +      L+ A+ R +I+S+ + + ++L LSS
Sbjct: 236 ASFTFISKLVDGKFPDYQRVLPKNSTKTVVGERDVLKSALSRAAILSNEKYRGIRLHLSS 295

Query: 293 DKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDS 352
           D+L +  +NP+  +A E ++V Y   P++I FN  YLL+++  I      +D V   L  
Sbjct: 296 DQLQVVANNPEQEEAEEIISVDYQGEPLEIGFNVSYLLDVLGVIH-----EDSVKVSLSD 350

Query: 353 SNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            + S  +   D+          NA YV+MPMR+
Sbjct: 351 PSGSALLEAADE--------HANAMYVVMPMRL 375


>gi|15640045|ref|NP_062597.1| DNA polymerase III subunit beta [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121727891|ref|ZP_01680950.1| DNA polymerase III, beta chain [Vibrio cholerae V52]
 gi|147674757|ref|YP_001218399.1| DNA polymerase III subunit beta [Vibrio cholerae O395]
 gi|153819849|ref|ZP_01972516.1| DNA polymerase III, beta chain [Vibrio cholerae NCTC 8457]
 gi|153821934|ref|ZP_01974601.1| DNA polymerase III, beta chain [Vibrio cholerae B33]
 gi|227080250|ref|YP_002808801.1| DNA polymerase III, beta chain [Vibrio cholerae M66-2]
 gi|229508298|ref|ZP_04397802.1| DNA polymerase III beta subunit [Vibrio cholerae BX 330286]
 gi|229508863|ref|ZP_04398354.1| DNA polymerase III beta subunit [Vibrio cholerae B33]
 gi|229517134|ref|ZP_04406580.1| DNA polymerase III beta subunit [Vibrio cholerae RC9]
 gi|229606572|ref|YP_002877220.1| DNA polymerase III subunit beta [Vibrio cholerae MJ-1236]
 gi|254851578|ref|ZP_05240928.1| DNA polymerase III subunit beta [Vibrio cholerae MO10]
 gi|262155884|ref|ZP_06029006.1| DNA polymerase III beta subunit [Vibrio cholerae INDRE 91/1]
 gi|262167101|ref|ZP_06034816.1| DNA polymerase III beta subunit [Vibrio cholerae RC27]
 gi|298501198|ref|ZP_07010997.1| DNA polymerase III, beta subunit [Vibrio cholerae MAK 757]
 gi|14547987|sp|Q9KVX5|DPO3B_VIBCH RecName: Full=DNA polymerase III subunit beta
 gi|9654404|gb|AAF93191.1| DNA polymerase III, beta chain [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121629835|gb|EAX62250.1| DNA polymerase III, beta chain [Vibrio cholerae V52]
 gi|126509610|gb|EAZ72204.1| DNA polymerase III, beta chain [Vibrio cholerae NCTC 8457]
 gi|126520554|gb|EAZ77777.1| DNA polymerase III, beta chain [Vibrio cholerae B33]
 gi|146316640|gb|ABQ21179.1| DNA polymerase III, beta chain [Vibrio cholerae O395]
 gi|227008138|gb|ACP04350.1| DNA polymerase III, beta chain [Vibrio cholerae M66-2]
 gi|227011984|gb|ACP08194.1| DNA polymerase III, beta chain [Vibrio cholerae O395]
 gi|229346197|gb|EEO11169.1| DNA polymerase III beta subunit [Vibrio cholerae RC9]
 gi|229354138|gb|EEO19070.1| DNA polymerase III beta subunit [Vibrio cholerae B33]
 gi|229354571|gb|EEO19493.1| DNA polymerase III beta subunit [Vibrio cholerae BX 330286]
 gi|229369227|gb|ACQ59650.1| DNA polymerase III beta subunit [Vibrio cholerae MJ-1236]
 gi|254847283|gb|EET25697.1| DNA polymerase III subunit beta [Vibrio cholerae MO10]
 gi|262024487|gb|EEY43173.1| DNA polymerase III beta subunit [Vibrio cholerae RC27]
 gi|262030336|gb|EEY48978.1| DNA polymerase III beta subunit [Vibrio cholerae INDRE 91/1]
 gi|297540070|gb|EFH76132.1| DNA polymerase III, beta subunit [Vibrio cholerae MAK 757]
          Length = 366

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ + + +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|237801663|ref|ZP_04590124.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024522|gb|EGI04578.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 367

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 214/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D +V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGTVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L+S +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVMGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYSGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|262273131|ref|ZP_06050948.1| DNA polymerase III beta subunit [Grimontia hollisae CIP 101886]
 gi|262222887|gb|EEY74195.1| DNA polymerase III beta subunit [Grimontia hollisae CIP 101886]
          Length = 366

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TV R   L+ L      +  + T+P+  ++LL+   G L +  +  E+E+   +P  
Sbjct: 1   MKFTVTRDQFLKPLQQVSGALGGRPTLPILGNILLKVESGQLSMTCTDLEVELIANLPLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G++TV +    DI R L D A ISF  E   G    I  G S F L + P ++FP
Sbjct: 61  SEAQEGAVTVPSRKFLDICRGLPDSASISFSLE---GDRAVIRSGRSRFTLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F L    L+ L+E T F+MA +++RY+LNG+      E   L +VATDGH
Sbjct: 118 NIEDWQSTVEFTLPQGKLRQLMESTAFSMANQDVRYFLNGMLLE--TEGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV    +  ++A    +IVPRK V E++R+L + D+ V + +  + I   +     + 
Sbjct: 176 RMAVGTTLLDNELAAQ-QVIVPRKGVTELMRMLDNPDAPVTIQIGSANIRALVNQFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S++K +   C +LRQA  R +I+S+ + + V+L+LS+ +L ++ 
Sbjct: 235 KLVDGRFPDYRRVLPQSSNKIMEAGCDDLRQAFSRAAILSNEKFRGVRLNLSAGQLRISA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+  +A E ++V Y+   ++I FN  Y+L++++ + S     ++V F +    +S  +
Sbjct: 295 HNPEQEEAEEFVDVNYDGDDLEIGFNVSYVLDVLNTLKS-----EQVRFSMTDGTASTLV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              + D         +A YV+MP+R+
Sbjct: 350 EDCNND---------DAMYVVMPIRL 366


>gi|209693644|ref|YP_002261572.1| DNA polymerase III subunit beta [Aliivibrio salmonicida LFI1238]
 gi|208007595|emb|CAQ77695.1| DNA polymerase III subunit beta-subunit [Aliivibrio salmonicida
           LFI1238]
          Length = 369

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 117/386 (30%), Positives = 218/386 (56%), Gaps = 18/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ L      +  + ++P+  ++LLQ  +G L + A+  E+E+   I   
Sbjct: 1   MKFSIERSHLLKPLQQVSGALGGRPSLPIFGNILLQVENGQLSMTATDLEVELISNILLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G+ITV +    DI R L DGA I+   E   G  V +  G S F L + P  +FP
Sbjct: 61  GDFEAGAITVPSRKFLDICRGLPDGANITIVLE---GDRVLVRSGRSRFTLATLPAQDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +      L+ + L+ L+E T F+MA +++RYYLNG+ F          +VATDGH
Sbjct: 118 NIEGWQSEVEITLSQAQLRKLIESTQFSMANQDVRYYLNGMMFETQG--TIFRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  + + +++ +   +I+PRK + E++R+L S + SV +    S +   + +   + 
Sbjct: 176 RMAVCNMPVESELPEQ-QVIMPRKGIQELVRLLDSPEQSVTLQFGNSNVRAEVNNFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S++K L  +C  LRQA  R +I+S+ + + V+++L+++++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQSSNKTLEADCDELRQAFARAAILSNEKFRGVRVNLANNQMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L+++D +++ +   + V   + ++N+S  +
Sbjct: 295 NNPEQEEAEEILDVDFQGEDIEIGFNVSYVLDVLDVLNTLKC--ERVRISMTTANASALV 352

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D            YV+MP+R+
Sbjct: 353 EDCANDEAQ---------YVVMPIRL 369


>gi|238917985|ref|YP_002931499.1| DNA polymerase III subunit beta [Edwardsiella ictaluri 93-146]
 gi|269137360|ref|YP_003294060.1| DNA polymerase III, beta subunit [Edwardsiella tarda EIB202]
 gi|238867553|gb|ACR67264.1| DNA polymerase III, beta subunit, putative [Edwardsiella ictaluri
           93-146]
 gi|267983020|gb|ACY82849.1| DNA polymerase III, beta subunit [Edwardsiella tarda EIB202]
 gi|304557461|gb|ADM40125.1| DNA polymerase III beta subunit [Edwardsiella tarda FL6-60]
          Length = 366

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK  VER  +++ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +P  
Sbjct: 1   MKFIVEREHLIKPLQQVSSPLGGRPTLPILGNLLLQVEDGHLSLTGTDLEMEMVARVPLV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A    DI R L DGA+IS   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEAGATTVPARKFLDICRGLPDGAEISVALD---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   ++ +++ +  + +  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRLLDGGETPLRLQIGSNNLRAHVGGFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKALEAGCDELKQAFARAAILSNEKFRGVRLHVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + VV  L  + SSV I
Sbjct: 295 NNPEQEEAEELLDVDYPGSDLEIGFNVSYVLDVLNALKC-----ERVVMMLTDAVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDA---------ASQAAVYVVMPMRL 366


>gi|257097208|pdb|3F1V|A Chain A, E. Coli Beta Sliding Clamp, 148-153 Ala Mutant
 gi|257097209|pdb|3F1V|B Chain B, E. Coli Beta Sliding Clamp, 148-153 Ala Mutant
          Length = 366

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA     YYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAAAAAAYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|330876356|gb|EGH10505.1| DNA polymerase III subunit beta [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964180|gb|EGH64440.1| DNA polymerase III subunit beta [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 367

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 212/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEIGVEYNGESLEIGFNVSYLLDVLSVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|71736736|ref|YP_272317.1| DNA polymerase III subunit beta [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557289|gb|AAZ36500.1| DNA polymerase III, beta subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320321689|gb|EFW77788.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331109|gb|EFW87080.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330881907|gb|EGH16056.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330952331|gb|EGH52591.1| DNA polymerase III subunit beta [Pseudomonas syringae Cit 7]
 gi|330961506|gb|EGH61766.1| DNA polymerase III subunit beta [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330987020|gb|EGH85123.1| DNA polymerase III subunit beta [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 367

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L+S +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYNGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|319405029|emb|CBI78639.1| DNA polymerase III, beta chain [Bartonella sp. AR 15-3]
          Length = 373

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 158/387 (40%), Positives = 247/387 (63%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ RS +L+ LG   RI+ER+NTIP+  +VL+ A+DG +++KA+  ++EIT +   +
Sbjct: 1   MRVTISRSQLLKSLGRVHRIVERRNTIPILSNVLIDASDGRMQLKATDLDLEITESSSVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ITV AHLLYDIVRKL D +++    +    + ++I+ G +NF LQ  P+ +FP 
Sbjct: 61  IEQSGAITVPAHLLYDIVRKLLDDSEVILDVDESQASTMSITSGCTNFQLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++   F L +S LK L++ T FAM+TEE RYYLNGI+FH I+++  KL  V+TDGH
Sbjct: 121 SLPGQFSCRFSLLASKLKYLIDCTQFAMSTEETRYYLNGIYFHIISDDISKLRLVSTDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++       MP +I+PRK VGE+ ++L  + D+ V + LS+++I  ++ S+ ++
Sbjct: 181 RLAQVDIEAPLGSDGMPGVIIPRKTVGELQKLLGEEADNDVCIELSDTKIRFSVGSVILT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L +N  +   AVDRVS +SS R +AVKL +    +   
Sbjct: 241 SKLIDGVFPEYQRVIPLKNDKKLIINRRDFSSAVDRVSTISSDRGRAVKLMIEKGLVRFV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y   P++I FN +YLL+I   +SS     DE++F    S +   
Sbjct: 301 VNNPDSGSAKDQLVADYAFDPLEIGFNSRYLLDIAAQLSS-----DEMIFTFADSGAPTL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IRG         ++  ++ YVLMP+R+
Sbjct: 356 IRG---------NSDTDSLYVLMPIRV 373


>gi|298484610|ref|ZP_07002715.1| DNA polymerase III beta subunit [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298160867|gb|EFI01883.1| DNA polymerase III beta subunit [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 367

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDVKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYNGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|212712613|ref|ZP_03320741.1| hypothetical protein PROVALCAL_03708 [Providencia alcalifaciens DSM
           30120]
 gi|212684829|gb|EEB44357.1| hypothetical protein PROVALCAL_03708 [Providencia alcalifaciens DSM
           30120]
          Length = 366

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LL   +G L++  +  E+E+   +P +
Sbjct: 1   MKFIIEREQLLKPLQQVSGPLGGRPTLPILGNLLLHVKEGALQLTGTDLEMEMMANVPLT 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ TV A   +DI R L +G++I     ++    + +  G S F L + P ++FP
Sbjct: 61  REHEIGATTVPARKFFDIWRGLPEGSEIQVELNDD---RLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S+LK L+E T F+MA +++RYYLNG+ F        L  V+TDGH
Sbjct: 118 NLDDWQSEVEFSLPQSILKRLIEATQFSMAHQDVRYYLNGMLFETEGNM--LRTVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +DI  ++    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMDIGQELPSH-SVIVPRKGVMELMRLLDGGDALLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEARCDLLKQAFSRAAILSNEKFRGVRLFFSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ + S     + V   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVNYQGGEMEIGFNVSYILDVLNALKS-----ENVTLFLTDAVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +A YV+MPMR+
Sbjct: 350 EDS---------ASRSAVYVVMPMRL 366


>gi|260771048|ref|ZP_05879976.1| DNA polymerase III beta subunit [Vibrio furnissii CIP 102972]
 gi|260613937|gb|EEX39128.1| DNA polymerase III beta subunit [Vibrio furnissii CIP 102972]
          Length = 366

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS  ++ L      +  + T+P+  ++LL+  D  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHFIKPLQQVSGTLGGRATLPILGNLLLKVEDNQLSMTATDLEVELVSRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G+ TV A    DI R L D A I+   E   G  V +  G S F L + P S+FP
Sbjct: 61  GDFEAGTTTVPARKFLDICRGLPDAAVITVVLE---GDRVQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    L+ LVE+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVELSLTQGELRGLVEKTQFSMANQDVRYYLNGMLFEI--DGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++ ++ A  A    IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTELGADFAN-KQIIVPRKGVLELVKLLDAPEQPVVLQIGSSNLRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + +K L+  C  LRQA  R +I+S+ + + V+++L   ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQNTNKTLQAGCDELRQAFSRAAILSNEKFRGVRVNLDGGEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++   ++I FN  Y+L++++ +       + V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVNFDGEAIEIGFNVSYVLDVLNTLRC-----ENVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|330970326|gb|EGH70392.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 367

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 214/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSNDALIDIKLDDS---KLIVKAGRSRFTLSTLPSNDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFTLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D +V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGTVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L+S +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYNGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|330890248|gb|EGH22909.1| DNA polymerase III subunit beta [Pseudomonas syringae pv. mori str.
           301020]
          Length = 367

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 212/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L   A I    ++    ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLSSDALIDIKLDDS---KLIVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLVQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSMSADIEHADRHQVIVPRKGILEMARLLTEQDGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L+S +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVEYNGDSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|50123358|ref|YP_052525.1| DNA polymerase III subunit beta [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613884|emb|CAG77336.1| DNA polymerase III, beta chain [Pectobacterium atrosepticum
           SCRI1043]
          Length = 366

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++L+Q  +G L +  +  E+E+   +   
Sbjct: 1   MKFIVERERLLKPLQQVSSPLGGRPTLPILGNLLIQVTEGALSLTGTDLEMEMVAKVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPEGAEITIMLD---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E   L  VATDGH
Sbjct: 118 NLDDWQSDVEFSLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--DLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L L  ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLKQAFSRAAILSNEKFRGVRLHLIQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVQYDGTEMEIGFNVSYVLDVLNALKC-----EGVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDS---------ASRAAAYVVMPMRL 366


>gi|188535561|ref|YP_001909358.1| DNA polymerase III subunit beta [Erwinia tasmaniensis Et1/99]
 gi|188030603|emb|CAO98498.1| DNA polymerase III subunit beta [Erwinia tasmaniensis Et1/99]
          Length = 366

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  +
Sbjct: 1   MKFTVERELLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGTLLLTGTDLEMEMVARVALT 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P S+FP
Sbjct: 61  QDHEPGATTVPARKFFDICRGLPEGAEIAVILEGE---RMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    +  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGD--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   DS ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVIELVRLLDGGDSLLQVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLDASCDLLKQAFSRAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVTYGGTDLEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|307133246|ref|YP_003885262.1| DNA polymerase III, subunit beta [Dickeya dadantii 3937]
 gi|306530775|gb|ADN00706.1| DNA polymerase III, beta subunit [Dickeya dadantii 3937]
          Length = 366

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ ++G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGRLSLTGTDLEMEMVAHLALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L DGA+IS   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPDGAEISVTLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F  + E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETSGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  LRQA  R +I+S+ + + V+L L+ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLRQAFSRAAILSNEKFRGVRLYLNQNQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVEYGGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDAASQAAA---------YVVMPMRL 366


>gi|284007064|emb|CBA72339.1| DNA polymerase III subunit beta [Arsenophonus nasoniae]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 131/386 (33%), Positives = 217/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK T+ER  +L+ L      +  + T+P+  ++LLQ ++ +L +  +  E+E+   +   
Sbjct: 1   MKFTIEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVSENILSLTGTDLEVEMVAKVTLT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GSITV A   +DI R L DGA+I    E   G  + +  G S F L + P ++FP
Sbjct: 61  QPGESGSITVPARKFFDIWRGLPDGAEIKVTLE---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFELPQATLKRLIEATQFSMAHQDVRYYLNGMLFE--TEGQELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  ++I   +    S+IVPRK V E +R+L S D S+K+ +  + I  ++     + 
Sbjct: 176 RLAVCSLNIDKDLP-THSVIVPRKGVVEFMRLLDSSDESLKLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLTADCDKLKQAFSRAAILSNEKFRGVRLYISENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  ++ E ++V Y    ++I FN  Y+L++++ +       ++V   L  SNSSV I
Sbjct: 295 NNPEQEESEEIVDVNYQSPMIEIGFNVSYILDVLNTLKC-----EQVNLLLTDSNSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                ++           YV+MPMR+
Sbjct: 350 EDAATNAAA---------YVVMPMRL 366


>gi|315178625|gb|ADT85539.1| DNA polymerase III, beta chain [Vibrio furnissii NCTC 11218]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS  ++ L      +  + T+P+  ++LL+  D  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHFIKPLQQVSGTLGGRATLPILGNLLLKVEDNQLSMTATDLEVELVSRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G+ TV A    DI R L D A I+   E   G  V +  G S F L + P S+FP
Sbjct: 61  GDFEAGTTTVPARKFLDICRGLPDAAVITVVLE---GDRVQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L    L+ LVE+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVELSLTQGELRGLVEKTQFSMANQDVRYYLNGMLFEI--DGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++ ++ A  A    IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTELGADFAN-KQIIVPRKGVLELVKLLDALEQPVVLQIGSSNLRAEVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + +K L+  C  LRQA  R +I+S+ + + V+++L   ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQNTNKTLQAGCDELRQAFSRAAILSNEKFRGVRVNLDGGEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V ++   ++I FN  Y+L++++ +       D V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEMLDVNFDGEAIEIGFNVSYVLDVLNTLRC-----DNVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|153827733|ref|ZP_01980400.1| DNA polymerase III, beta chain [Vibrio cholerae MZO-2]
 gi|229515948|ref|ZP_04405405.1| DNA polymerase III beta subunit [Vibrio cholerae TMA 21]
 gi|149737791|gb|EDM52696.1| DNA polymerase III, beta chain [Vibrio cholerae MZO-2]
 gi|229347048|gb|EEO12010.1| DNA polymerase III beta subunit [Vibrio cholerae TMA 21]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D  S         A YV+MP+R+
Sbjct: 350 ENVDDGS---------AMYVVMPIRL 366


>gi|126172259|ref|YP_001048408.1| DNA polymerase III subunit beta [Shewanella baltica OS155]
 gi|152998557|ref|YP_001364238.1| DNA polymerase III subunit beta [Shewanella baltica OS185]
 gi|160873128|ref|YP_001552444.1| DNA polymerase III subunit beta [Shewanella baltica OS195]
 gi|217971218|ref|YP_002355969.1| DNA polymerase III subunit beta [Shewanella baltica OS223]
 gi|304412706|ref|ZP_07394309.1| DNA polymerase III, beta subunit [Shewanella baltica OS183]
 gi|307305829|ref|ZP_07585575.1| DNA polymerase III, beta subunit [Shewanella baltica BA175]
 gi|125995464|gb|ABN59539.1| DNA polymerase III, beta subunit [Shewanella baltica OS155]
 gi|151363175|gb|ABS06175.1| DNA polymerase III, beta subunit [Shewanella baltica OS185]
 gi|160858650|gb|ABX47184.1| DNA polymerase III, beta subunit [Shewanella baltica OS195]
 gi|217496353|gb|ACK44546.1| DNA polymerase III, beta subunit [Shewanella baltica OS223]
 gi|304348916|gb|EFM13331.1| DNA polymerase III, beta subunit [Shewanella baltica OS183]
 gi|306911322|gb|EFN41748.1| DNA polymerase III, beta subunit [Shewanella baltica BA175]
 gi|315265353|gb|ADT92206.1| DNA polymerase III, beta subunit [Shewanella baltica OS678]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L   C  +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILSNLLVEVSGHSLKLTGTDLEVELVGQVVVH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DIV+ L + +     K  +   +  +  G S F L + P  E+P
Sbjct: 61  GDIEEGRTTVPAKKLLDIVKSLPEQS---ELKVEQQDNKWLLRSGRSRFSLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F L   VLK++++ T F+MA +++RYYLNG+ F        L A+ATDGH
Sbjct: 118 NVEAFQAEIEFSLKQGVLKSIIDSTQFSMANQDVRYYLNGLLFETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I AQ+ +   +IVPRK V E+ R+L S D  + +++ ++ I     +   + 
Sbjct: 176 RLALSHRTIEAQLPE-KQVIVPRKGVMEMARLLESDDLDIAIAIGDNAIRATTANTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  +L+QA+ R SI+S+ + + V++ L +  L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALTRASILSNEKFRGVRIQLENGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEIIDVEYNNQALEIGFNVSYLLDVLNNLKS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                        + ++ YV+MPMR+
Sbjct: 350 E---------NHLEEDSMYVVMPMRL 366


>gi|229524914|ref|ZP_04414319.1| DNA polymerase III beta subunit [Vibrio cholerae bv. albensis
           VL426]
 gi|229338495|gb|EEO03512.1| DNA polymerase III beta subunit [Vibrio cholerae bv. albensis
           VL426]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ + + +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQAGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D+V   +  +N+S  +
Sbjct: 295 NNPEQEEAEELLDVSFEGDPIEIGFNVSYVLDVLNTLRC-----DQVRVSMSDANASALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENVDDDS---------AMYVVMPIRL 366


>gi|330447268|ref|ZP_08310918.1| DNA polymerase III, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491459|dbj|GAA05415.1| DNA polymerase III, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/386 (29%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + ++P+  ++LL+  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVAAALGGRPSLPILGNILLKVEDGCLSMTGTDLEVELIAKVALD 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G++TV +    DI R L   A IS   E   G  V I  G S + L + P ++FP
Sbjct: 61  GEFESGAVTVPSRKFLDICRGLPSSASISVSYE---GDRVLIRSGRSRYTLTTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F L    ++ L++ T F+MA +++RYYLNG+ F    +   L +VATDGH
Sbjct: 118 NIEDWQSEVEFTLEQGRMRQLIDSTQFSMANQDVRYYLNGMLFE--TDGQHLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  ++   ++     IIVPRK V E++R+  + ++ V + +  S I   + +   + 
Sbjct: 176 RMAVCAINTGHELP-TKQIIVPRKGVLELVRLFDNPEAEVNIQIGNSNIRATVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P ++ K +   C  +R A  R +I+S+ + + V+++LS+ ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNSTKFVEAGCEEMRNAFARAAILSNEKFRGVRVNLSNGEIRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       D+V   L  +N+   I
Sbjct: 295 NNPEQEEAEEFLDVDYQGDSLEIGFNVSYVLDVLNTLKC-----DQVRLSLSDANAPSLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              + D          A YV+MP+R+
Sbjct: 350 EDSNNDE---------AMYVVMPIRL 366


>gi|83642916|ref|YP_431351.1| DNA polymerase III subunit beta [Hahella chejuensis KCTC 2396]
 gi|83630959|gb|ABC26926.1| DNA polymerase III, beta subunit [Hahella chejuensis KCTC 2396]
          Length = 367

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 209/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAI-PA 59
           MK+T+ R  ++  L     ++E++ T+PV  +VLL A DG L I  +  E+E+   I   
Sbjct: 1   MKLTITREALVTSLQMISGVVEKRQTMPVLANVLLDARDGKLVITGTNMEVELVAEISDV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +++    ITV A    DI R L +GA I    ++     +N+ +G S+F L + P   FP
Sbjct: 61  NIEHESRITVPAKKFTDICRALPEGAAIGIELKDG---RLNVRYGSSHFILSTLPAEHFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +EE       L    LK L++ T FAMA +++RYYLNG+      ++  L  VATDGH
Sbjct: 118 NVEEEPESVKVTLPQRELKRLIDATAFAMAQQDVRYYLNGMLME--LDEQGLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A V +   +++    IVPRK + E+ R+L+  D S  +   ++ +  ++   + + 
Sbjct: 176 RLALANVSLQTGVSEKRQPIVPRKGILELGRLLNDTDESCTLVFGDNHVRASVGHFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG+FP+YQ VIP S DK +  +   L+  + R SI+S   I+ V+L      L +  
Sbjct: 236 KLIDGKFPDYQRVIPRSGDKVMLADRVLLKGVLSRASILSHESIRGVRLQFEEGLLKVFA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NPD  +A +S+ V Y    + I FN  YL+++++ +      D++V   L ++NSS  +
Sbjct: 296 NNPDQEEAEDSLEVEYPHEALQIGFNVGYLIDVLNALD-----DEQVKVTLSNANSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
            G D           +A YV+MPMR+
Sbjct: 351 EGVD---------TRDAVYVVMPMRL 367


>gi|22127980|ref|NP_671403.1| DNA polymerase III subunit beta [Yersinia pestis KIM 10]
 gi|45443727|ref|NP_995266.1| DNA polymerase III subunit beta [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598226|ref|YP_072417.1| DNA polymerase III subunit beta [Yersinia pseudotuberculosis IP
           32953]
 gi|108810132|ref|YP_654048.1| DNA polymerase III subunit beta [Yersinia pestis Antiqua]
 gi|108814114|ref|YP_649881.1| DNA polymerase III subunit beta [Yersinia pestis Nepal516]
 gi|150260969|ref|ZP_01917697.1| DNA polymerase III, beta subunit protein [Yersinia pestis
           CA88-4125]
 gi|153950603|ref|YP_001403094.1| DNA polymerase III subunit beta [Yersinia pseudotuberculosis IP
           31758]
 gi|162419235|ref|YP_001608447.1| DNA polymerase III subunit beta [Yersinia pestis Angola]
 gi|165926167|ref|ZP_02221999.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165936833|ref|ZP_02225399.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009556|ref|ZP_02230454.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166213164|ref|ZP_02239199.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167401667|ref|ZP_02307161.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167422858|ref|ZP_02314611.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425558|ref|ZP_02317311.1| DNA polymerase III, beta subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167470925|ref|ZP_02335629.1| DNA polymerase III, beta subunit [Yersinia pestis FV-1]
 gi|170022264|ref|YP_001718769.1| DNA polymerase III subunit beta [Yersinia pseudotuberculosis YPIII]
 gi|186893346|ref|YP_001870458.1| DNA polymerase III subunit beta [Yersinia pseudotuberculosis PB1/+]
 gi|218931073|ref|YP_002348948.1| DNA polymerase III subunit beta [Yersinia pestis CO92]
 gi|229839803|ref|ZP_04459962.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229841888|ref|ZP_04462044.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229896765|ref|ZP_04511928.1| DNA polymerase III, beta subunit [Yersinia pestis Pestoides A]
 gi|229904653|ref|ZP_04519764.1| DNA polymerase III, beta subunit [Yersinia pestis Nepal516]
 gi|270488364|ref|ZP_06205438.1| DNA polymerase III, beta subunit [Yersinia pestis KIM D27]
 gi|294505624|ref|YP_003569686.1| DNA polymerase III subunit beta [Yersinia pestis Z176003]
 gi|21961125|gb|AAM87654.1|AE014012_11 DNA polymerase III, beta-subunit [Yersinia pestis KIM 10]
 gi|45438597|gb|AAS64143.1| DNA polymerase III, beta subunit protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591508|emb|CAH23180.1| DNA polymerase III, beta subunit protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777762|gb|ABG20281.1| DNA polymerase III, beta subunit [Yersinia pestis Nepal516]
 gi|108782045|gb|ABG16103.1| DNA polymerase III, beta subunit [Yersinia pestis Antiqua]
 gi|115349684|emb|CAL22665.1| DNA polymerase III, beta subunit protein [Yersinia pestis CO92]
 gi|149290377|gb|EDM40454.1| DNA polymerase III, beta subunit protein [Yersinia pestis
           CA88-4125]
 gi|152962098|gb|ABS49559.1| DNA polymerase III, beta subunit [Yersinia pseudotuberculosis IP
           31758]
 gi|162352050|gb|ABX85998.1| DNA polymerase III, beta subunit [Yersinia pestis Angola]
 gi|165915075|gb|EDR33686.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922027|gb|EDR39204.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991478|gb|EDR43779.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166205462|gb|EDR49942.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166958250|gb|EDR55271.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049049|gb|EDR60457.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167055572|gb|EDR65365.1| DNA polymerase III, beta subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169748798|gb|ACA66316.1| DNA polymerase III, beta subunit [Yersinia pseudotuberculosis
           YPIII]
 gi|186696372|gb|ACC87001.1| DNA polymerase III, beta subunit [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678771|gb|EEO74876.1| DNA polymerase III, beta subunit [Yersinia pestis Nepal516]
 gi|229691227|gb|EEO83280.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696169|gb|EEO86216.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700203|gb|EEO88239.1| DNA polymerase III, beta subunit [Yersinia pestis Pestoides A]
 gi|262363788|gb|ACY60509.1| DNA polymerase III subunit beta [Yersinia pestis D106004]
 gi|262367725|gb|ACY64282.1| DNA polymerase III subunit beta [Yersinia pestis D182038]
 gi|270336868|gb|EFA47645.1| DNA polymerase III, beta subunit [Yersinia pestis KIM D27]
 gi|294356083|gb|ADE66424.1| DNA polymerase III subunit beta [Yersinia pestis Z176003]
 gi|320017426|gb|ADW00998.1| DNA polymerase III, beta subunit [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 366

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLEMEMVACVALS 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P  +FP
Sbjct: 61  QSHEPGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAIDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKMLEAGCDLLKQAFSRAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYEGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDSASQAAA---------YVVMPMRL 366


>gi|330500916|ref|YP_004377785.1| DNA polymerase III subunit beta [Pseudomonas mendocina NK-01]
 gi|328915202|gb|AEB56033.1| DNA polymerase III subunit beta [Pseudomonas mendocina NK-01]
          Length = 367

 Score =  274 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVTLE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L   A I    +++   ++ +  G S F L + P ++FP
Sbjct: 61  DAAEPGEITVPARKLMDICKSLPSDALIDIRVDDQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  + L+ L+ERT FAMA +++RYYLNG+   +      L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLPQAKLRRLIERTSFAMAQQDVRYYLNGMLLEVQSG--LLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  ++   Q      +IVPRK + E+ R+L+ +D+ V + L +  I  N    + + 
Sbjct: 176 RLAMCSMEASIQQDGKHQVIVPRKGILELARLLTEQDAEVSIVLGQHHIRANTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L+L+   L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKLVLADRQGLREAFSRTAILSNEKYRGIRLTLADGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  + +     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEIVVDYNGGGLEIGFNVSYLLDVLGVMGT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QEADND---------DSAYVVMPMRL 367


>gi|312958104|ref|ZP_07772627.1| DNA polymerase III beta subunit [Pseudomonas fluorescens WH6]
 gi|311287535|gb|EFQ66093.1| DNA polymerase III beta subunit [Pseudomonas fluorescens WH6]
          Length = 367

 Score =  274 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQ---KLVVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++E    + AVATDGH
Sbjct: 118 TVEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGI--IRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +           +IVPRK + E+ R+L+  D +V + L +  I       + + 
Sbjct: 176 RLAMCSMRADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVDYNGGSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|170738369|ref|YP_001767024.1| DNA polymerase III subunit beta [Methylobacterium sp. 4-46]
 gi|168192643|gb|ACA14590.1| DNA polymerase III, beta subunit [Methylobacterium sp. 4-46]
          Length = 373

 Score =  274 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 171/388 (44%), Positives = 240/388 (61%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++TVER+ +L  LGH  R++ER+NTIP+  +VLL+++   L+++A+  +IE+T  IPA 
Sbjct: 1   MRVTVERAALLRSLGHVHRVVERRNTIPILSNVLLRSSADGLQLRATDLDIEVTETIPAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV AH++YDIVRKL DG Q+S     E G ++ I  G S F L + PE++FP 
Sbjct: 61  VVDGGATTVPAHVIYDIVRKLPDGVQVSLETTGETG-QMQIRSGRSRFMLGALPEADFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               E  + F+L ++ LK L+++T FA++TEE RYYLNGIFFH    E  L+L AVATDG
Sbjct: 120 LAAGELPHRFQLQAAELKKLIDKTQFAISTEETRYYLNGIFFHTIETEAGLRLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES-LSM 237
           HRLA  E+        MP IIVPRKAV EI +++     SV V LS +++     S +++
Sbjct: 180 HRLARVEMPAPEGSRGMPGIIVPRKAVAEIQKLVEDGGDSVGVELSPAKVRFTFSSGVTL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +LIDG FP+YQ VIP  NDK L V      +AVDRVS +SS R +AVKL++   +L +
Sbjct: 240 ISKLIDGTFPDYQRVIPTGNDKLLTVEREQFAKAVDRVSTISSERGRAVKLAVGGGRLSL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+NPD G A E ++V Y   P+DI FN +YLL+I   +       D  +F+L    S  
Sbjct: 300 SVNNPDSGSATEELDVDYEAAPLDIGFNARYLLDITAQLDG-----DSALFKLADPGSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I+ K+            A YVLMPMR+
Sbjct: 355 LIQDKEGAP---------ALYVLMPMRV 373


>gi|145597326|ref|YP_001161401.1| DNA polymerase III subunit beta [Yersinia pestis Pestoides F]
 gi|145209022|gb|ABP38429.1| DNA polymerase III, beta subunit [Yersinia pestis Pestoides F]
          Length = 366

 Score =  274 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLEMEMVACVALS 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P  +FP
Sbjct: 61  QSHEPGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAIDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKMLEAGCDLLKQAFSRAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYEGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                             YV+MPMR+
Sbjct: 350 EDSASQVAA---------YVVMPMRL 366


>gi|227113115|ref|ZP_03826771.1| DNA polymerase III subunit beta [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328544|ref|ZP_03832568.1| DNA polymerase III subunit beta [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|261819372|ref|YP_003257478.1| DNA polymerase III subunit beta [Pectobacterium wasabiae WPP163]
 gi|261603385|gb|ACX85871.1| DNA polymerase III, beta subunit [Pectobacterium wasabiae WPP163]
          Length = 366

 Score =  274 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++L+Q  +G L +  +  E+E+   +   
Sbjct: 1   MKFIVERERLLKPLQQVSSPLGGRPTLPILGNLLIQVTEGALSLTGTDLEMEMVAKVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPEGAEITIMLD---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFSLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L L  ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLKQAFSRAAILSNEKFRGVRLHLIQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVQYDGTEMEIGFNVSYVLDVLNALKC-----EGVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDS---------ASRAAAYVVMPMRL 366


>gi|253686411|ref|YP_003015601.1| DNA polymerase III, beta subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251752989|gb|ACT11065.1| DNA polymerase III, beta subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 366

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++L+Q  +  L +  +  E+E+   +   
Sbjct: 1   MKFIVERERLLKPLQQVSSPLGGRPTLPILGNLLIQVTEDALSLTGTDLEMEMVAKVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPEGAEITIMLD---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSDVEFSLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L L  ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLKQAFSRAAILSNEKFRGVRLHLIQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVQYDGTEMEIGFNVSYVLDVLNALKC-----EGVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDS---------ASRAAAYVVMPMRL 366


>gi|183597171|ref|ZP_02958664.1| hypothetical protein PROSTU_00414 [Providencia stuartii ATCC 25827]
 gi|188023485|gb|EDU61525.1| hypothetical protein PROSTU_00414 [Providencia stuartii ATCC 25827]
          Length = 366

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +P +
Sbjct: 1   MKFTIEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVKEGALLLTGTDLEMEMMAHVPLT 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ TV A   +DI R L +G++I    +++    + +  G S F L + P ++FP
Sbjct: 61  QEHDVGATTVPARKFFDIWRGLPEGSEIRVELDDD---RLLVRSGRSRFSLSTLPATDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S+LK L+E T F+MA +++RYYLNG+ F    E   L  V+TDGH
Sbjct: 118 NLDDWQSEVEFSLPQSILKRLIEATQFSMAHQDVRYYLNGMLFE--TEGQLLRTVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +DI   +    S+IVPRK V E++R+L   D+ V++ +  + I  ++     + 
Sbjct: 176 RLAVCAMDIGQDLPSH-SVIVPRKGVIELMRLLDGGDTPVQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEARCDLLKQAFSRAAILSNEKFRGVRLYFSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ + S     + V   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVNYQGTEMEIGFNVSYILDVLNALKS-----ENVTLFLTDAVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDS---------ASSAAVYVVMPMRL 366


>gi|312112797|ref|YP_004010393.1| DNA polymerase III subunit beta [Rhodomicrobium vannielii ATCC
           17100]
 gi|311217926|gb|ADP69294.1| DNA polymerase III, beta subunit [Rhodomicrobium vannielii ATCC
           17100]
          Length = 373

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 158/388 (40%), Positives = 236/388 (60%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           M+  V+R+ +L  LGH   I+ER+NTIP+  ++L+ A+ DG L  KA+  ++E   A+PA
Sbjct: 1   MRFVVDRNAMLRALGHITGIVERRNTIPILSNILIGADRDGGLTFKATDLDMEAVEAVPA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            V+V G++TV AH L+DIVRKL DGA+I   ++ E G  + ++ G ++F L   P  +FP
Sbjct: 61  KVEVTGAVTVPAHTLHDIVRKLPDGAEIRIERKGEEG-RLKVATGRASFELAILPADDFP 119

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL--KLCAVATD 177
              + E    F + S  LK L E+  FA++TEE RYYLNGI+ H  +     KL AVATD
Sbjct: 120 DMGQTELPTRFTVDSGELKRLFEKARFAISTEETRYYLNGIYLHAVDGPEGGKLRAVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  E    A    MP +IVPRKAVGE++++L S  + V+V+LS ++I   +  + +
Sbjct: 180 GHRLAQVETACPAGAGGMPGVIVPRKAVGEVIKLLESGAAPVEVTLSPAKIRFAVGDVVL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP+Y  VIP +N K L +   +L +AVDRVS +SS + +AVKL+ +  +L +
Sbjct: 240 TSKLIDGSFPDYARVIPTTNKKLLLLENADLVKAVDRVSTLSSEKGRAVKLNAAEGRLVV 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           + +NP+ G A E ++  Y + P++I FN +YLL+I   I   + +     F+L   +S  
Sbjct: 300 SANNPESGSATEEISAEYQDEPLEIGFNARYLLDITGQIDGTKAL-----FKLADGSSPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I  +   S         A YVLMPMR+
Sbjct: 355 LISDETDAS---------ALYVLMPMRV 373


>gi|315634816|ref|ZP_07890098.1| DNA-directed DNA polymerase III beta subunit [Aggregatibacter
           segnis ATCC 33393]
 gi|315476368|gb|EFU67118.1| DNA-directed DNA polymerase III beta subunit [Aggregatibacter
           segnis ATCC 33393]
          Length = 366

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 114/386 (29%), Positives = 204/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+  + R ++L+ L   C ++  +  IPV  +VLLQ  +  L I  +  E+E++   P  
Sbjct: 1   MQFIISRENLLKPLQQVCGVLNSRPNIPVLNNVLLQIENNQLSITGTDLEVELSTQTPLL 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             +  G  T+ A    DI R L D A+I+   E +      +    S F L + P  ++P
Sbjct: 61  HAEQDGKFTIPAKKFLDICRSLPDNAEITVTFEED---RAIVRSDRSKFNLSTLPAEDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFTLEQATLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   + +  S+I+PRK V E+ R+L   +   ++ +  + + + + +++ + 
Sbjct: 176 RLAVCTIPLEQDL-QTHSVILPRKGVLELARLLEPSEQPARLQIGTNNLRIQLNNITFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + +      L+QA  R +I+S+ R ++V+L LS ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATRIVEAGWETLKQAFVRAAILSNERFRSVRLQLSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y+   M++ FN  Y+L++++ +  +     +V  RL  ++SS  I
Sbjct: 295 TNPEQEVAEEIIDVSYSGEEMEVGFNVSYILDVLNALKCN-----QVRMRLTDASSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 EDCEDASAE---------YVIMPMRL 366


>gi|329297782|ref|ZP_08255118.1| DNA polymerase III subunit beta [Plautia stali symbiont]
          Length = 366

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ N+G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVNEGTLLLTGTDLEMEMVARVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A    DI R L +GA+IS   E   G  + +  G S F L + P S+FP
Sbjct: 61  QPHEPGATTVPARKFLDICRGLPEGAEISLTLE---GDRMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   ++ ++V +  S I  ++     + 
Sbjct: 176 RLAVCSMPV-GQALPNHSVIVPRKGVIELVRLLDGGETPLQVQIGSSNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V++ ++ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKALEAGCDLLKQAFARAAILSNEKFRGVRIYITENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVSYSGTELEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDV---------ASPAAAYVVMPMRL 366


>gi|16124411|ref|NP_418975.1| DNA polymerase III subunit beta [Caulobacter crescentus CB15]
 gi|221233094|ref|YP_002515530.1| DNA polymerase III subunit beta [Caulobacter crescentus NA1000]
 gi|239977224|sp|B8GXP6|DPO3B_CAUCN RecName: Full=DNA polymerase III subunit beta
 gi|239977225|sp|P0CAU5|DPO3B_CAUCR RecName: Full=DNA polymerase III subunit beta
 gi|1049324|gb|AAB51448.1| DNA polymerase III beta subunit [Caulobacter crescentus CB15]
 gi|13421269|gb|AAK22143.1| DNA polymerase III, beta subunit [Caulobacter crescentus CB15]
 gi|220962266|gb|ACL93622.1| DNA polymerase III, beta chain [Caulobacter crescentus NA1000]
          Length = 372

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 135/387 (34%), Positives = 214/387 (55%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH   ++ER+NTIP+  ++LL A    L   A+  ++EI     A 
Sbjct: 1   MKLTIERAALLKALGHVQSVVERRNTIPILSNILLSAEGDRLSFSATDLDMEIIDEGFAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +DV G IT  AH LY+IVRKL DGA +S     +    + I  G S F L   P  +FP 
Sbjct: 61  IDVPGQITAPAHTLYEIVRKLPDGADVSLSFSGDD-PRLVIQAGRSRFNLPVLPAGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
              +       + ++ L  L+++T FA++TEE RYYLNG++ H      + KL AVATDG
Sbjct: 120 MSSDGLSSRIAVDTNELIRLIDKTRFAISTEETRYYLNGLYVHTVNEGGETKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE+        +P +IVPRK + E  R++ S   +V + +S  ++     + +++
Sbjct: 180 HRLALAEMPAPEGAVGIPGVIVPRKTIAEARRLMESAGETVDLQVSPQKVRFEFGAAALT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N K L ++     +AVDRV+ +S+ + ++VKL++   ++ +T
Sbjct: 240 SKVIDGAFPDYMRVIPRDNAKILTLDNDLFAKAVDRVATISAEKSRSVKLAVEPGRITLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A+E + V Y+  P +I FN +YLL++   I+       +  FR     S   
Sbjct: 300 VRNMEAGQAVEEVEVDYDGEPFEIGFNARYLLDVCGQIAG-----PQAEFRFADPASPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +                  YVLMP+R+
Sbjct: 355 VVDPVD---------PGVKYVLMPLRV 372


>gi|117619320|ref|YP_854529.1| DNA polymerase III, beta subunit [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560727|gb|ABK37675.1| DNA polymerase III, beta subunit [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 367

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ + R  +L  L      +  + T+P+  +VLL  ++GLL +  +  E+E+ G +  +
Sbjct: 1   MQLEISREALLRPLQLVSGALGGRPTLPILGNVLLDVSNGLLSLTGTDLEVEMIGQVYLN 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DI R L +GA I    E E    + I  G S F L + P +E+P
Sbjct: 61  SDSQDGRTTVPARKLLDICRGLPEGADIRLNTEGE---RLIIRSGRSRFNLSTLPATEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ E V  F++    LK L++ T F+MA++++RYYLNG+ F    E   L  VATDGH
Sbjct: 118 NIEDWESVLEFDIGQLELKKLIDATQFSMASQDVRYYLNGMLFE--SEGHGLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA    ++V +      +I+PRK V E++R+L ++D  V++ +  S +   ++    + 
Sbjct: 176 RLATCRREVVTESLPDHQVILPRKGVLELVRLLEAEDKPVRLQIGRSNLRAALDGFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+++ VIP ++DK L     +LRQA  R +I+S+ + + V+L+L  + L +T 
Sbjct: 236 KLVDGRFPDWRRVIPRNSDKALIAGREDLRQAFARAAILSNEKFRGVRLNLQENLLRITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       D++   L  S SS  I
Sbjct: 296 NNPEQEEAEELLDVQYEAGEMEIGFNVSYVLDVLNTLKC-----DQIRISLSDSISSAII 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D           +A YV+MPMRI
Sbjct: 351 EDFD---------SQDAQYVVMPMRI 367


>gi|331007622|ref|ZP_08330764.1| DNA polymerase III beta subunit [gamma proteobacterium IMCC1989]
 gi|330418562|gb|EGG93086.1| DNA polymerase III beta subunit [gamma proteobacterium IMCC1989]
          Length = 369

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 120/387 (31%), Positives = 213/387 (55%), Gaps = 20/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +V R  +L  L     ++ER+ T+PV  +VL+   +  L +  +  E+EI   +P  
Sbjct: 1   MKFSVSREALLVPLQLVAGVVERRQTLPVLANVLVVLENETLSLTGTDLEVEIVARLPLE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             V   G IT+ A  L DI R L DGA + F  + +   +V +  G S F L + P ++F
Sbjct: 61  NPVQDTGEITIPAKKLVDICRSLPDGATVEFILQEDQ--KVIVKSGRSRFTLATLPSNDF 118

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           PST++ E    F  + S++K L++RT FAMA +++RYYLNG+ + +     +L  VATDG
Sbjct: 119 PSTEKSEGDLQFSCSQSIIKRLIDRTAFAMAQQDVRYYLNGMLWEVEGN--RLRCVATDG 176

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+   ++   + +    I+PRK V E+ R+L+ +++ + ++L    I ++  + + +
Sbjct: 177 HRLAMCVRELDIDVPEKSQAILPRKGVIELSRLLNDQEAQIDLTLGTHHIRVDTPNYTFT 236

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +L+DG+FP+Y+ V+P      +  N T L+QA  R +I+S+ + + V+L+ +   L + 
Sbjct: 237 SKLVDGKFPDYERVLPKGGTNVVLGNRTELKQAFARTAILSNEKYRGVRLNFTEGLLNIV 296

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E + + Y    ++I FN  YL +I   +++     + V   L  +NSS  
Sbjct: 297 ANNPEQEEAEEQVVIDYKGDEIEIGFNVSYLQDITSVLNT-----ENVKITLSDANSSAL 351

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +   ++          ++ YV+MPMR+
Sbjct: 352 LEEPEEG---------DSVYVVMPMRL 369


>gi|292490135|ref|YP_003533030.1| DNA polymerase III subunit beta [Erwinia amylovora CFBP1430]
 gi|292901139|ref|YP_003540508.1| DNA polymerase III subunit beta [Erwinia amylovora ATCC 49946]
 gi|291200987|emb|CBJ48126.1| DNA polymerase III, beta-subunit [Erwinia amylovora ATCC 49946]
 gi|291555577|emb|CBA24171.1| DNA polymerase III, beta-subunit [Erwinia amylovora CFBP1430]
 gi|312174328|emb|CBX82581.1| DNA polymerase III, beta-subunit [Erwinia amylovora ATCC BAA-2158]
          Length = 366

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  A
Sbjct: 1   MKFTVERERLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGTLLLTGTDLEMEMVARVALA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P S+FP
Sbjct: 61  QDHQPGATTVPARKFFDICRGLPEGAEIAVILEGE---RMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L + DS ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVIELVRLLDAGDSLLQVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLDAGCDLLKQAFARAAILSNEKFRGVRLHISENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVTYGGTDLEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|300721091|ref|YP_003710359.1| DNA polymerase III subunit beta [Xenorhabdus nematophila ATCC
           19061]
 gi|297627576|emb|CBJ88095.1| DNA polymerase III, beta-subunit [Xenorhabdus nematophila ATCC
           19061]
          Length = 366

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E E+   +   
Sbjct: 1   MKFIIEREQLLKPLQQVSSPLSGRPTLPILGNLLLQVTEGSLLLTGTDLETEMKARVTLT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A   +DI R L DGA+IS   +   G  + +  G S F L + P S+FP
Sbjct: 61  QPHEQGATTIPARKFFDIWRGLPDGAEISVELD---GDRILVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFSLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  ++I   +    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMNIGQNLPSH-SVIVPRKGVIELMRLLDGGDNPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  NC  L+QA  R +I+S+ + + V++ LS ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEANCDMLKQAFSRAAILSNEKFRGVRIYLSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVSYQGTEMEIGFNVSYVLDVLNALKC-----EQVSLLLTDATSSVKI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 E---------NSASQAATYVVMPMRL 366


>gi|296100373|ref|YP_003610519.1| DNA polymerase III subunit beta [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295054832|gb|ADF59570.1| DNA polymerase III subunit beta [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 366

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMIARVTLT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHDAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGDSLPNH-SVIVPRKGVIELMRMLDGGDTPLRVQIGSNNIRAHVGDFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C +L+QA  R +I+S+ + + V+L +S +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDSLKQAFARAAILSNEKFRGVRLYVSENQIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGAEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|146309669|ref|YP_001174743.1| DNA polymerase III subunit beta [Enterobacter sp. 638]
 gi|145316545|gb|ABP58692.1| DNA polymerase III, beta subunit [Enterobacter sp. 638]
          Length = 366

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +  S
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P  +FP
Sbjct: 61  QPHDAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRILVRSGRSRFSLSTLPAIDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGVTLPNH-SVIVPRKGVIELMRMLDGGENPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGTEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|327395908|dbj|BAK13330.1| DNA polymerase III beta subunit DnaN [Pantoea ananatis AJ13355]
          Length = 366

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++L+Q N+G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLMQVNEGSLLLTGTDLEMEMVARVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A    DI R L +GA+I+   E E    + +  G S F L + P S+FP
Sbjct: 61  QPHETGATTVPARKFLDICRGLPEGAEINVTLEGE---RMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQNEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMMFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E+LR+L   D+ ++V +  S I  ++     + 
Sbjct: 176 RLAVCSMPI-GQALPSHSVIVPRKGVIELLRLLDGGDTPLQVQIGSSNIRAHVGDYIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L ++ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKALEAGCDLLKQAFARAAILSNEKFRGVRLHITENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVSYTGSELEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 EDV---------VSPAAAYVVMPMRL 366


>gi|291615642|ref|YP_003518384.1| DnaN [Pantoea ananatis LMG 20103]
 gi|291150672|gb|ADD75256.1| DnaN [Pantoea ananatis LMG 20103]
          Length = 407

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++L+Q N+G L +  +  E+E+   +   
Sbjct: 42  MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLMQVNEGSLLLTGTDLEMEMVARVALT 101

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A    DI R L +GA+I+   E E    + +  G S F L + P S+FP
Sbjct: 102 QPHETGATTVPARKFLDICRGLPEGAEINVTLEGE---RMLVRSGRSRFSLSTLPASDFP 158

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 159 NLDDWQNEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMMFETEGE--ELRTVATDGH 216

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E+LR+L   D+ ++V +  S I  ++     + 
Sbjct: 217 RLAVCSMPI-GQALPSHSVIVPRKGVIELLRLLDGGDTPLQVQIGSSNIRAHVGDYIFTS 275

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L ++ ++L +T 
Sbjct: 276 KLVDGRFPDYRRVLPKNPDKALEAGCDLLKQAFARAAILSNEKFRGVRLHITENQLKITA 335

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 336 NNPEQEEAEEMLDVSYTGSELEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 390

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 391 EDV---------VSPAAAYVVMPMRL 407


>gi|261346741|ref|ZP_05974385.1| DNA polymerase III, beta subunit [Providencia rustigianii DSM 4541]
 gi|282565141|gb|EFB70676.1| DNA polymerase III, beta subunit [Providencia rustigianii DSM 4541]
          Length = 366

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L++  +  E+E+   +P +
Sbjct: 1   MKFIIEREQLLKPLQQVSGPLGGRPTLPILGNLLLQVKEGALQLTGTDLEMEMMANVPLT 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ TV A   +DI R L +G++I     ++    + +  G S F L + P ++FP
Sbjct: 61  REHEVGATTVPARKFFDIWRGLPEGSEIQVELNDD---RLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S+LK L+E T F+MA +++RYYLNG+ F    E   L  V+TDGH
Sbjct: 118 NLDDWQSEVEFSLPQSILKRLIEATQFSMAHQDVRYYLNGMLFE--TEGQLLRTVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +DI  ++    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMDIGQELPSH-SVIVPRKGVIELMRLLDGGDAPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEARCDLLKQAFSRAAILSNEKFRGVRLFFSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ + S     + V   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVSYQGGEMEIGFNVSYILDVLNTLKS-----ENVTLFLTDAVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +A YV+MPMR+
Sbjct: 350 EDS---------ASRSAVYVVMPMRL 366


>gi|322830735|ref|YP_004210762.1| DNA polymerase III, subunit beta [Rahnella sp. Y9602]
 gi|321165936|gb|ADW71635.1| DNA polymerase III, beta subunit [Rahnella sp. Y9602]
          Length = 366

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +  S
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTDGALSLTGTDLEMEMVAKVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+IS   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEAGATTVPARKFFDICRGLPEGAEISVALD---GDRMLVKSGRSRFSLSTLPATDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+++++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVMELVRLLDGGDTTLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L+  C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLQAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVGYEGTEMEIGFNVSYVLDVLNALKC-----EDVNLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|259910294|ref|YP_002650650.1| DNA polymerase III subunit beta [Erwinia pyrifoliae Ep1/96]
 gi|224965916|emb|CAX57449.1| DNA polymerase III subunit beta [Erwinia pyrifoliae Ep1/96]
 gi|283480418|emb|CAY76334.1| DNA polymerase III, beta-subunit [Erwinia pyrifoliae DSM 12163]
 gi|310765873|gb|ADP10823.1| DNA polymerase III subunit beta [Erwinia sp. Ejp617]
          Length = 366

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  +
Sbjct: 1   MKFTVERERLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGTLLLTGTDLEMEMVARVALT 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P S+FP
Sbjct: 61  HDHQPGATTVPARKFFDICRGLPEGAEIAVILEGE---RMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   DS +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQSLPSHSVIVPRKGVIELVRLLDGGDSLLQIQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLDAGCDLLKQAFARAAILSNEKFRGVRLHISENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVTYGGTDLEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|300719140|ref|YP_003743943.1| DNA polymerase III subunit beta [Erwinia billingiae Eb661]
 gi|299064976|emb|CAX62096.1| DNA polymerase III subunit beta [Erwinia billingiae Eb661]
          Length = 366

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQ N+G L +  +  E+E+   +  +
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVNEGSLLLTGTDLEMEMVARVALT 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ TV A   +DI R L +GA+I+   + E    + +  G S F L + P S+FP
Sbjct: 61  QEHEPGATTVPARKFFDICRGLPEGAEITVMLDGE---RMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  +      F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWTSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q+    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPVGQQLPSH-SVIVPRKGVIELVRLLDGGDTPLQVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLDAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEMLDVTYGGTDMEIGFNVSYVLDVLNALKC-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|114561190|ref|YP_748703.1| DNA polymerase III, beta subunit [Shewanella frigidimarina NCIMB
           400]
 gi|114332483|gb|ABI69865.1| DNA polymerase III, beta subunit [Shewanella frigidimarina NCIMB
           400]
          Length = 366

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L   C  +ER++ +P+  ++L++ ++  L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSESSLKLTGTDLEVELVGQAAIH 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D+  G  TV A  L DIV+ L + +     K  +   +  +  G S F L + P  ++P
Sbjct: 61  GDIDIGRTTVPAKKLLDIVKSLPEQS---ELKVEQQDNKWLLRSGRSRFSLATLPAEDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E +    F L   VLK++++ T F+MA +++RYYLNG+ F        L A+ATDGH
Sbjct: 118 NVEEFQADIEFSLKQGVLKSIIDSTQFSMANQDVRYYLNGLLFETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   +   + +   +IVPRK V E+ R+L S D  + +++ ++ I     S   + 
Sbjct: 176 RLALSHRTLDVSLPE-KQVIVPRKGVVEMARLLDSDDQDITIAIGDNAIRAITSSAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   +K +  +   L+QA+ R SI+S+ + + V++ L +  L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGNKVVIASRNQLKQALTRASILSNEKFRGVRIQLETGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   ++I FN  YLL++++N++S     DEV   L   NSS  I
Sbjct: 295 NNPEQEEAEEIIDVEYDSDNLEIGFNVSYLLDVLNNLAS-----DEVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         ++ YV+MPMR+
Sbjct: 350 ENHKEE---------DSMYVVMPMRL 366


>gi|163751708|ref|ZP_02158927.1| DNA polymerase III, beta subunit [Shewanella benthica KT99]
 gi|161328447|gb|EDP99603.1| DNA polymerase III, beta subunit [Shewanella benthica KT99]
          Length = 366

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVNGAVERRHNLPILANLLVEVSGHTLKMTGTDLEVELVGQVQLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  T+ A    DIV+ L D  +I   ++      + +  G S F L + P  E+P
Sbjct: 61  GDVEEGRTTIPAKKFLDIVKSLPDQVEIKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  E    F +   +LK+L++ T F+MA +++RYYLNG+    +     L A+ATDGH
Sbjct: 118 NVEAFESDIEFTIKQGILKSLIDATQFSMANQDVRYYLNGLLLETDGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I A + K   +IVPRK V E+ R+   +D  V +++ ++ I     S  ++ 
Sbjct: 176 RLALSHRKIEANLPK-KQVIVPRKGVVELQRLYEGEDLDVTIAIGDNAIRATTSSAVLTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L ++ L +T 
Sbjct: 235 KLIDGRFPDYRRVLPKGGDKIVIASRNQLKQALLRASILSNEKFRGVRVQLENNLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+  P++I FN  YLL++++N+ S     DEV   L   NSS  I
Sbjct: 295 NNPEQEEAEEIIDVEYDNTPLEIGFNVSYLLDVLNNLPS-----DEVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         N+ YV+MPMR+
Sbjct: 350 ENHIEE---------NSMYVVMPMRL 366


>gi|149184745|ref|ZP_01863063.1| DNA polymerase III subunit beta [Erythrobacter sp. SD-21]
 gi|148832065|gb|EDL50498.1| DNA polymerase III subunit beta [Erythrobacter sp. SD-21]
          Length = 374

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 150/391 (38%), Positives = 223/391 (57%), Gaps = 23/391 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK T+ER+ +L  L H   ++ER+NTIP+  +VL++A    L + A+  ++++   I  A
Sbjct: 1   MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIEAEGNGLRVMATDLDLQVVEHIEAA 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           SV+  G+ITVSAHLL+DI RKL +G+Q+S          +++  G S F L + P  +FP
Sbjct: 61  SVESDGAITVSAHLLFDIARKLPEGSQVSLETAEN---RMDVKAGRSRFKLPTLPRDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDG 178
              E +   SF L +  L  +++RT FA++TEE RYYLNGIF H  +E+   L A ATDG
Sbjct: 118 MIVEGDLPTSFSLPAKTLAEMIDRTRFAISTEETRYYLNGIFLHVSDEDQPVLKAAATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNI---ES 234
           HRLA   +        MP +IVPRKAV E+ ++L  K D  V++ LS S+I   +     
Sbjct: 178 HRLARFTLARPEGAEGMPDVIVPRKAVAELRKLLDEKMDGDVQIDLSASKIRFTLGGEGG 237

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + ++ +LIDG FP+Y  VIP  NDK L+++  +    VDRV+ +++ + +AVK+ L  D+
Sbjct: 238 VVLTSKLIDGTFPDYSRVIPTGNDKLLKIDPKSFFAGVDRVATIATEKTRAVKMGLDKDR 297

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           + +TV +PD G A E +   Y     +I FN  YL +I+  I S     D+V   L  + 
Sbjct: 298 VTLTVTSPDNGTASEELAAEYGSDGFEIGFNAGYLKDILSQIDS-----DQVEIHLADAG 352

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +   IR  D            A YVLMPMR+
Sbjct: 353 APTLIRKNDDSP---------ALYVLMPMRV 374


>gi|218673040|ref|ZP_03522709.1| DNA polymerase III subunit beta [Rhizobium etli GR56]
          Length = 361

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 178/376 (47%), Positives = 250/376 (66%), Gaps = 17/376 (4%)

Query: 12  ELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVDVCGSITVSA 71
           + L H  R++ER+NTIP+  +VLL+A+   L++KA+  ++EIT A PASV+  G+ TV A
Sbjct: 1   KSLNHVHRVVERRNTIPILSNVLLKADGQNLDMKATDLDLEITEATPASVEQAGATTVPA 60

Query: 72  HLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTKEEEYVYSFE 131
           HLLYDIVRKL DG+++      + G  + +  G S F LQ  PES+FP      + +SF+
Sbjct: 61  HLLYDIVRKLSDGSEVLLATSPDGG-SMTVQSGRSKFSLQCLPESDFPDLTAGTFTHSFK 119

Query: 132 LASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDGHRLAVAEVDIV 189
           L +S LK L++RT FA++TEE RYYLNGIFFH   ++ +LKL AVATDGHRLA A+VD  
Sbjct: 120 LKASDLKMLIDRTQFAISTEETRYYLNGIFFHTIESKGELKLRAVATDGHRLARADVDAP 179

Query: 190 AQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDGEFPNY 249
           +    MP II+PRK VGE+ +++ + ++ V V +S+++I + I S+ ++ +LIDG FP+Y
Sbjct: 180 SGSEGMPGIIIPRKTVGELQKLVDNPEAIVTVEVSDAKIRMTIGSIVLTSKLIDGTFPDY 239

Query: 250 QNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIE 309
           Q VIP  NDKE+RV+CT+  QAVDRVS +SS R +AVKL+LS  +L +TV+NPD G A E
Sbjct: 240 QRVIPTGNDKEMRVDCTSFAQAVDRVSTISSERGRAVKLALSEGQLMLTVNNPDSGSATE 299

Query: 310 SMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNN 369
            + V Y+   M+I FN KYLL+I   +S      +E +F L  + S   IR    D    
Sbjct: 300 EVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTLIRDTAGD---- 350

Query: 370 KDNKVNAFYVLMPMRI 385
                +A YVLMPMR+
Sbjct: 351 -----DALYVLMPMRV 361


>gi|237806778|ref|YP_002891218.1| DNA polymerase III, beta subunit [Tolumonas auensis DSM 9187]
 gi|237499039|gb|ACQ91632.1| DNA polymerase III, beta subunit [Tolumonas auensis DSM 9187]
          Length = 367

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 212/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R  +L  L      I  + T+P+  +VLL   +  L +  +  E+E+ G +P +
Sbjct: 1   MQFSISRDSLLRPLQLVSGSIGGRPTLPILSNVLLNVTEQRLSLTGTDLEVEMIGLVPLA 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             V  GSIT  A  L DI R L DGAQ+ F  E E    + +  G S + L + P +++P
Sbjct: 61  GAVAVGSITTPARKLLDICRGLPDGAQLDFVLEGE---RLILRSGRSRYSLSTLPAADYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E   V  F+++   LK L+E T F+MA++++R+YLNG+ F  +     L  V TDGH
Sbjct: 118 NIEEWNSVLEFDISQQELKRLMEATQFSMASQDVRFYLNGMLFETSG--QGLRTVGTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA    +++ +      +I+PRK V E+ R+L + D ++++ +  + +    E    + 
Sbjct: 176 RLATCRREVLNEPQSDHQVILPRKGVLELARLLENDDRTIRLQIGLNNLRAEAEGFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V P  +DK L      L+QA  R +I+S+ + + V+L L+++ L +T 
Sbjct: 236 KLVDGRFPDYRRVFPRQSDKILIAERELLKQAFSRAAILSNEKFRGVRLHLTTNLLHITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   +++ FN  Y+L++++ +       ++V + L  +NSS  +
Sbjct: 296 NNPEQEEAEELIDVQYDGPELEVGFNVSYVLDVLNALKC-----EQVKWYLTDANSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D         +A YV+MPMR+
Sbjct: 351 EDASND---------DAQYVVMPMRL 367


>gi|120596835|ref|YP_961409.1| DNA polymerase III subunit beta [Shewanella sp. W3-18-1]
 gi|146291113|ref|YP_001181537.1| DNA polymerase III subunit beta [Shewanella putrefaciens CN-32]
 gi|120556928|gb|ABM22855.1| DNA polymerase III, beta subunit [Shewanella sp. W3-18-1]
 gi|145562803|gb|ABP73738.1| DNA polymerase III, beta subunit [Shewanella putrefaciens CN-32]
 gi|319424419|gb|ADV52493.1| DNA polymerase III, beta subunit [Shewanella putrefaciens 200]
          Length = 366

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L   C  +ER++ +P+  ++L++ +   L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILSNLLVEVSGHSLKLTGTDLEVELVGQAVVH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DIV+ L + +     K  +   +  +  G S F L + P  E+P
Sbjct: 61  GDIEEGRTTVPAKKLLDIVKSLPEQS---ELKVEQQDNKWLLRSGRSRFSLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F L   VLK++++ T F+MA +++RYYLNG+ F        L A+ATDGH
Sbjct: 118 NVEAFQAEIEFSLKQGVLKSIIDSTQFSMANQDVRYYLNGLLFETEGNM--LRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I AQ+ +   +IVPRK V E+ R+L S D  + +++ ++ I     +   + 
Sbjct: 176 RLALSHRVIDAQLPE-KQVIVPRKGVMEMARLLESDDLDIAIAIGDNAIRATTANTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  +L+QA+ R SI+S+ + + V++ L +  L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALTRASILSNEKFRGVRIQLENGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEIIDVDYNNQSLEIGFNVSYLLDVLNNLKS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                        + ++ YV+MPMR+
Sbjct: 350 E---------NHLEEDSMYVVMPMRL 366


>gi|320539855|ref|ZP_08039514.1| DNA polymerase III, beta subunit [Serratia symbiotica str. Tucson]
 gi|320030041|gb|EFW12061.1| DNA polymerase III, beta subunit [Serratia symbiotica str. Tucson]
          Length = 366

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQA +G L +  +  E+E+   +  S
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQAMEGSLLLTGTDLEMEMVARVALS 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   ENE    + +  G S F L + P ++FP
Sbjct: 61  QTHEAGATTVPARKFFDICRGLPEGAEIAVTLENE---RILVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  +ATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q+    S+IVPRK V E+LR+L S D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGQQLPSH-SVIVPRKGVMELLRLLDSGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKILEAGCDLLKQAFARAAILSNEKFRGVRLYASHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ + S     + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGTEMEIGFNVSYVLDVLNALKS-----ENVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 ED---------GVSQAAAYVVMPMRL 366


>gi|226942172|ref|YP_002797245.1| DNA polymerase III subunit beta [Azotobacter vinelandii DJ]
 gi|226717099|gb|ACO76270.1| DNA polymerase III, beta chain 1, 2, and 3 protein [Azotobacter
           vinelandii DJ]
          Length = 367

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +P  
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEKQQLSLTGTDLEVELVGRVPLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G ITV A  L DI + L +   I    + +   ++ I  G S F L + P S+FP
Sbjct: 61  ENAEPGEITVPARKLMDICKSLPNDTLIDIRLDEQ---KLLIKAGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  S L+ L+ERT FAMA +++RYYLNG+   +N     L AVATDGH
Sbjct: 118 TAEEGLGSLTFSLGQSKLRRLIERTSFAMAQQDVRYYLNGMLLEMNGG--VLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    + A    +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLALCSMQSGIEHADRHQVIVPRKGILELARLLTDQDGEVSIVLGQYHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK++  +   LR+A  R +I+S+ + + ++L L+S  L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKKVLGDRQLLREAFSRTAILSNEKYRGIRLQLASGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y+   ++I FN  YLL+++  +S+     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVAVDYSGDALEIGFNVSYLLDVLGVMSA-----EQVCLTLSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QEADND---------DSAYVVMPMRL 367


>gi|251787654|ref|YP_003002375.1| DNA polymerase III subunit beta [Dickeya zeae Ech1591]
 gi|247536275|gb|ACT04896.1| DNA polymerase III, beta subunit [Dickeya zeae Ech1591]
          Length = 366

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ ++G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGRLSLTGTDLEMEMVAHLALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L DGA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPDGAEITVTLE---GDRMLVRSGRSRFSLSTLPATDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F       +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFE--TGGEELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMPV-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  LRQA  R +I+S+ + + V+L L+ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLRQAFSRAAILSNEKFRGVRLYLNQNQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       +EV   L  S SSV +
Sbjct: 295 NNPEQEEAEEILDVEYGGTEMEIGFNVSYVLDVLNALKC-----EEVRMLLTDSVSSVQL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDAASQAAA---------YVVMPMRL 366


>gi|319403602|emb|CBI77187.1| DNA polymerase III, beta chain [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 373

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 156/387 (40%), Positives = 240/387 (62%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ RS +L+ L    RI+ER+NTIP+  +VL+  +DG +++KA+  ++EI      +
Sbjct: 1   MRVTIGRSQLLKSLSRVHRIVERRNTIPILSNVLIDTSDGRMQLKATDLDLEIIETSSVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ITV AHLLYDIVRKL D + +         + ++I+ G +NF LQ  P+ +FP 
Sbjct: 61  LEQAGAITVPAHLLYDIVRKLPDDSDVILDVNENQASTMSITSGCTNFQLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL-KLCAVATDGH 179
           +   ++   F L +S LK L++ T FAM+TEE RYYLNGI+FH+  +D+ KL  V+TDGH
Sbjct: 121 SLPGQFSCRFSLLASRLKYLLDCTQFAMSTEETRYYLNGIYFHVIYDDILKLRLVSTDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  +    MP +I+PRK VGE+ ++L  + D+ V + LS+++I  ++ S+ ++
Sbjct: 181 RLAQVDIEAPSGADGMPGVIIPRKTVGELQKLLGEEADNDVCIELSDTKIRFSVGSVILT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L +N  +   AVDRVS +SS R +AVKL +    + + 
Sbjct: 241 SKLIDGVFPEYQRVIPLGNDKKLIINRQDFSAAVDRVSTISSDRGRAVKLMIEKGIVKLV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y   P++I FN +YLL+I   +SS     DE++     S +   
Sbjct: 301 VNNPDSGSAKDQLVADYVFDPLEIGFNSRYLLDIAAQLSS-----DEMICMFADSAAPTL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IRG             NA YVLMP+R+
Sbjct: 356 IRGNGD---------TNALYVLMPVRV 373


>gi|146305044|ref|YP_001185509.1| DNA polymerase III subunit beta [Pseudomonas mendocina ymp]
 gi|145573245|gb|ABP82777.1| DNA polymerase III, beta subunit [Pseudomonas mendocina ymp]
          Length = 367

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVTLE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L   A I    +++   ++ +  G S F L + P ++FP
Sbjct: 61  DAAEPGEITVPARKLMDICKSLPSDALIDIRVDDQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F L  + L+ L+ERT FAMA +++RYYLNG+   +      L AVATDGH
Sbjct: 118 TVEEGPGSLTFNLPQAKLRRLIERTSFAMAQQDVRYYLNGMLLEVQSGM--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  ++   Q      +IVPRK + E+ R+L+ +D+ V + L +  I  N    + + 
Sbjct: 176 RLAMCSMEAAIQQDGKHQVIVPRKGILELARLLTEQDAEVAIVLGQHHIRANTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L+L++  L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKLVLADRQGLREAFSRTAILSNEKYRGIRLTLAAGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  YLL+++  + +     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEIVVDYAGGGLEIGFNVSYLLDVLGVMGT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QEADND---------DSAYVVMPMRL 367


>gi|251791867|ref|YP_003006587.1| DNA polymerase III subunit beta [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533254|gb|ACS96500.1| DNA polymerase III, beta subunit [Aggregatibacter aphrophilus
           NJ8700]
          Length = 366

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 114/386 (29%), Positives = 204/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+  + R ++L+ L   C ++  +  IPV  +VLLQ  +  L I  +  E+E++   P  
Sbjct: 1   MQFIISRENLLKPLQQVCGVLNSRPNIPVLNNVLLQIENNQLNITGTDLEVELSTKTPLL 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             +  G  T+ A    DI R L + A+I+   E +      +    S F L + P  ++P
Sbjct: 61  HAEQDGKFTIPAKKFLDICRSLPENAEITVTFEED---RAIVRSDRSKFNLSTLPAEDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFTLEQATLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   + +  S+I+PRK V E+ R+L   D   ++ +  + + + + +++ + 
Sbjct: 176 RLAVCTIPLEQDL-QTHSVILPRKGVLELARLLEPSDQPARLQIGTNNLRIQLNNITFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + +      L+QA  R +I+S+ R ++V+L LS ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATRIVEAGWETLKQAFVRAAILSNERFRSVRLQLSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y+   M++ FN  Y+L++++ +  +     +V  RL  ++SS  I
Sbjct: 295 TNPEQEVAEEIIDVSYSGEEMEVGFNVSYILDVLNALKCN-----QVRMRLTDASSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 EDCEDASAE---------YVIMPMRL 366


>gi|295095339|emb|CBK84429.1| DNA polymerase III, beta subunit [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 366

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMIARVTLT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHDAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGDSLPNH-SVIVPRKGVIELMRMLDGGETPLRVQIGSNNIRAHVGDFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGAEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|90581123|ref|ZP_01236922.1| DNA polymerase III subunit beta [Vibrio angustum S14]
 gi|90437644|gb|EAS62836.1| DNA polymerase III subunit beta [Vibrio angustum S14]
          Length = 366

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + ++P+  ++LL+  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREYLLKPLQQVAAALGGRPSLPILGNILLKVEDGCLSMTGTDLEVELIAKVALE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G++TV +    DI R L   A IS   E   G  V I    S + L + P ++FP
Sbjct: 61  GDYESGTVTVPSRKFLDICRGLPSNATISVSYE---GDRVLIRSSRSRYTLTTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F L    ++ L++ T F+MA +++RYYLNG+ F    +   L +VATDGH
Sbjct: 118 NIEDWQSEVEFTLEQGRMRQLIDSTQFSMANQDVRYYLNGMLFE--TDGQHLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  +D   ++     IIVPRK V E++R+  + +S V + +  S I   + +   + 
Sbjct: 176 RMAVCAIDTGHELP-TKQIIVPRKGVLELVRLFDNPESLVNIQIGNSNIRATVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P ++ K +   C  +R A  R +I+S+ + + V+++LS+ ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNSTKFVEAGCEEMRNAFARAAILSNEKFRGVRVNLSNGEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       D+V   L  +N+   I
Sbjct: 295 NNPEQEEAEEFLDVDYQGDSLEIGFNVSYVLDVLNTLKC-----DQVRLSLSDANAPSLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D          A YV+MP+R+
Sbjct: 350 EDATNDE---------AMYVVMPIRL 366


>gi|261868624|ref|YP_003256546.1| DNA polymerase III subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413956|gb|ACX83327.1| DNA polymerase III, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 367

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 204/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+  + R ++L+ L   C ++  +  IPV  +VLLQ  +  L I  +  E+E++   P  
Sbjct: 2   MQFIISRENLLKPLQQVCGVLNSRPNIPVLNNVLLQIENNQLNITGTDLEVELSTQTPLL 61

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             +  G  T+ A    DI R L D A+I+   E +      +    S F L + P  ++P
Sbjct: 62  HAEQDGKFTIPAKKFLDICRSLPDNAEIAVTFEED---RAIVRSDRSKFNLSTLPAEDYP 118

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 119 NLTDWQSEVDFTLEQATLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 176

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   + +  S+I+PRK V E+ R+L   D   ++ +  + + + + +++ + 
Sbjct: 177 RLAVCTIPLEQDL-QTHSVILPRKGVLELARLLEPSDQPARLQIGTNNLRIQLNNITFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + +      L+QA  R +I+S+ R ++V+L LS ++L +T 
Sbjct: 236 KLIDGRFPDYRRVLPRNATRIVEAGWETLKQAFVRAAILSNERFRSVRLQLSENQLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y+   M++ FN  Y+L++++ +  +     +V  RL  ++SS  I
Sbjct: 296 TNPEQEVAEEIIDVSYSGEEMEVGFNVSYILDVLNALKCN-----QVRMRLTDASSSCLI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 351 EDCEDASAE---------YVIMPMRL 367


>gi|293391840|ref|ZP_06636174.1| DNA polymerase III, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952374|gb|EFE02493.1| DNA polymerase III, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 366

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 114/386 (29%), Positives = 204/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+  + R ++L+ L   C ++  +  IPV  +VLLQ  +  L I  +  E+E++   P  
Sbjct: 1   MQFIISRENLLKPLQQVCGVLNSRPNIPVLNNVLLQIENNQLNITGTDLEVELSTQTPLF 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             +  G  T+ A    D+ R L D A+I+   E +      +    S F L + P  ++P
Sbjct: 61  HAEHDGKFTIPAKKFLDLCRSLPDNAEITVTFEED---RAIVRSDRSKFNLSTLPAEDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFTLEQATLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   + +  S+I+PRK V E+ R+L   D   ++ +  + + + + +++ + 
Sbjct: 176 RLAVCTIPLEQDL-QTHSVILPRKGVLELARLLEPSDQPARLQIGTNNLRIQLNNITFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + +      L+QA  R +I+S+ R ++V+L LS ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATRIVEAGWETLKQAFVRAAILSNERFRSVRLQLSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y+   M++ FN  Y+L++++ +  +     +V  RL  ++SS  I
Sbjct: 295 TNPEQEVAEEIIDVSYSGEEMEVGFNVSYILDVLNALKCN-----QVRIRLTDASSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 EDCEDASAE---------YVIMPMRL 366


>gi|271498580|ref|YP_003331605.1| DNA polymerase III subunit beta [Dickeya dadantii Ech586]
 gi|270342135|gb|ACZ74900.1| DNA polymerase III, beta subunit [Dickeya dadantii Ech586]
          Length = 366

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ ++G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGRLSLTGTDLEMEMVAHLALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L DGA+IS   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPDGAEISVTLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F       +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFE--TGGEELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMPV-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  LRQA  R +I+S+ + + V+L L+ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLRQAFSRAAILSNEKFRGVRLYLNQNQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       +EV   L  S SSV +
Sbjct: 295 NNPEQEEAEEILDVEYGGTEMEIGFNVSYVLDVLNALKC-----EEVRMLLTDSVSSVQL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDAASQAAA---------YVVMPMRL 366


>gi|330827702|ref|YP_004390654.1| DNA polymerase III subunit beta [Aeromonas veronii B565]
 gi|328802838|gb|AEB48037.1| DNA polymerase III, beta subunit [Aeromonas veronii B565]
          Length = 367

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 214/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ + R  +L  L      +  + T+P+  +VLL  ++GLL +  +  E+E+ G +  +
Sbjct: 1   MQLEISREALLRPLQLVSGALGGRPTLPILGNVLLDVSNGLLSLTGTDLEVEMIGQVYLN 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G  TV A  L DI R L +GA+I    E E    + I  G S F L + P +E+P
Sbjct: 61  GASEDGRTTVPARKLLDICRGLPEGAEIRLNTEGE---RLIIRSGRSRFNLSTLPATEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ E V  F+++   LK L++ T F+MA++++RYYLNG+ F    E   L  VATDGH
Sbjct: 118 NIEDWESVLEFDISQLELKKLIDATQFSMASQDVRYYLNGMLFE--SEGHGLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA    ++V +      +I+PRK V E++R+L ++D  V++ +  S +   ++    + 
Sbjct: 176 RLATCRREVVGESLPDHQVILPRKGVLELVRLLEAEDKPVRLQIGRSNLRAALDGFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+++ VIP ++DK L     +LRQA  R +I+S+ + + V+L+L  + L +T 
Sbjct: 236 KLVDGRFPDWRRVIPRNSDKALIAGREDLRQAFARAAILSNEKFRGVRLNLQENLLRITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       D++   L  S SS  I
Sbjct: 296 NNPEQEEAEELLDVQYAAGEMEIGFNVSYVLDVLNTLKC-----DQIRISLSDSISSAII 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           +A YV+MPMRI
Sbjct: 351 EDFEH---------QDAQYVVMPMRI 367


>gi|157368282|ref|YP_001476271.1| DNA polymerase III subunit beta [Serratia proteamaculans 568]
 gi|157320046|gb|ABV39143.1| DNA polymerase III, beta subunit [Serratia proteamaculans 568]
          Length = 366

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGCLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L +GA+I+   E E    + +  G S F L + P  +FP
Sbjct: 61  QPHEAGATTVPARKLFDICRGLPEGAEITVTLEGE---RMLVRSGRSRFSLSTLPAVDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFSLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q+    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGQQLPSH-SVIVPRKGVMELVRLLDGGDTLLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDGASKSAA---------YVVMPMRL 366


>gi|238750288|ref|ZP_04611790.1| DNA polymerase III subunit beta [Yersinia rohdei ATCC 43380]
 gi|238711521|gb|EEQ03737.1| DNA polymerase III subunit beta [Yersinia rohdei ATCC 43380]
          Length = 366

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L+ +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLKASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       +EV   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGAEMEIGFNVSYVLDVLNALKC-----EEVSLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  +           YV+MPMR+
Sbjct: 350 EDGNSQAAA---------YVVMPMRL 366


>gi|253987485|ref|YP_003038841.1| DNA polymerase III subunit beta [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253778935|emb|CAQ82095.1| DNA polymerase III subunit beta [Photorhabdus asymbiotica]
          Length = 366

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +  L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREQLLKPLQQVSSPLGGRPTLPILGNLLLQVTESSLLLTGTDLEMEMMARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +    G+ TV A   +DI R L DGA+IS   +   G  + +  G S F L + P ++FP
Sbjct: 61  LPHEEGATTVPARKFFDIWRGLPDGAEISVELD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFSLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMGIGQNLPSH-SVIVPRKGVIELMRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDMLKQAFSRAAILSNEKFRGVRLYFSKNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       +EV   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVSYQGTEMEIGFNVSYVLDVLNTLRC-----EEVRLLLTDAISSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          NA YV+MPMR+
Sbjct: 350 ED---------CASHNAAYVVMPMRL 366


>gi|152977690|ref|YP_001343319.1| DNA polymerase III subunit beta [Actinobacillus succinogenes 130Z]
 gi|150839413|gb|ABR73384.1| DNA polymerase III, beta subunit [Actinobacillus succinogenes 130Z]
          Length = 366

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 103/385 (26%), Positives = 196/385 (50%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  V R ++L+ L   C ++  +  +PV  +VLLQ     L I  +  E+E++     +
Sbjct: 1   MQFIVSRENLLKPLQQVCGVLSSRPNVPVLNNVLLQIEGDRLTITGTDLEVELSTQAQLN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G+ T+ A    DI R L + A I+   E +      +    + F L +FP  E+P+
Sbjct: 61  SHGEGTFTIPAKKFLDICRSLPEDAVITVDFEQD---RAIVRSSRTKFNLATFPAEEYPN 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             + +    F ++ + ++ L+E T F+MA  + RY+LNG+ F        L  VATDGHR
Sbjct: 118 LTDWQSEVDFTVSQATMRRLIEATQFSMANNDARYFLNGMKFETEGN--LLRTVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LAV  +++   +     I+  +  +     + ++ +   +V +  +   + + S+  + +
Sbjct: 176 LAVCTIELEQDLQNHSVILPRKGVLELARLLDATSEQPARVQIGTNNFRVELGSVVFTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+Y+ V+P + ++ L  +  NL+Q+  R SI+SS +++ V+L L+ ++L +T  
Sbjct: 236 LIDGRFPDYRRVLPRNANRILESDWENLKQSFVRASILSSEKVRTVRLELNQNQLTITAK 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +  E ++V Y   P++I FN  Y+L++++ +         V  R   ++SS  I 
Sbjct: 296 NPEQEEVEEILDVSYQSEPIEIGFNVSYVLDVLNALKCQ-----RVRVRFTDASSSCLIE 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             + ++           YV+MPM++
Sbjct: 351 DCEDNTAE---------YVIMPMKL 366


>gi|238759585|ref|ZP_04620747.1| DNA polymerase III subunit beta [Yersinia aldovae ATCC 35236]
 gi|238702244|gb|EEP94799.1| DNA polymerase III subunit beta [Yersinia aldovae ATCC 35236]
          Length = 366

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  HPHEQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDSASQAAA---------YVVMPMRL 366


>gi|157959832|ref|YP_001499866.1| DNA polymerase III subunit beta [Shewanella pealeana ATCC 700345]
 gi|157844832|gb|ABV85331.1| DNA polymerase III, beta subunit [Shewanella pealeana ATCC 700345]
          Length = 366

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/386 (27%), Positives = 206/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ ++  L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSNHSLKLTGTDLEVELVGEVQLE 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            ++  G  TV A    DIV+ L D  ++   ++      + +  G S F L + P  E+P
Sbjct: 61  GEILEGRTTVPAKKFLDIVKSLPDQVELKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +    E    F L    +K+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVDAFEAEIEFTLKQGTMKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I A + +   I+  +  +  +     + D  V +++ ++ I     +   + 
Sbjct: 176 RLALSHRMIEASLPEKQVIVPRKGVLELMRS-FEADDLDVTIAIGDNAIRATTATAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L ++ + +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKVVIASRLQLKQALLRASILSNEKFRGVRVQLENNLIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y   P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEILDVEYENTPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                    +   + ++ YV+MPMR+
Sbjct: 350 ---------DNHIEQDSMYVVMPMRL 366


>gi|261341639|ref|ZP_05969497.1| hypothetical protein ENTCAN_08107 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315996|gb|EFC54934.1| DNA polymerase III, beta subunit [Enterobacter cancerogenus ATCC
           35316]
          Length = 366

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMIARVTLT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHNAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   ++ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGDSLPNH-SVIVPRKGVIELMRMLDGGETPLRVQIGSNNIRAHVGDFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGAEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|319898310|ref|YP_004158403.1| DNA polymerase III, beta chain [Bartonella clarridgeiae 73]
 gi|319402274|emb|CBI75813.1| DNA polymerase III, beta chain [Bartonella clarridgeiae 73]
          Length = 373

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 153/387 (39%), Positives = 238/387 (61%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I + RS +L+ L    R++ER+N IP+  +VL+ A+ G +++KA+  ++E+  +   +
Sbjct: 1   MRIIIGRSQLLKSLSRVHRVVERRNAIPILSNVLIDASSGGMQLKATDLDLEVIESSSVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G+ITV AHLLYDIVRKL D +++    +    + ++++ G +NF LQ  P+ +FP 
Sbjct: 61  IEKAGAITVPAHLLYDIVRKLPDDSEVILEVDENQPSTMSVTSGCANFRLQCLPKVDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
           +   ++   F L +S LK L++ T FAM+TEE RYYLNGI+FH I++   KL  V+TDGH
Sbjct: 121 SLPGQFSCRFSLLASRLKYLLDCTQFAMSTEETRYYLNGIYFHIIDDGTSKLRLVSTDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  +    MP +I+PRK VGE+ ++L  + D+ V + LS+++I  ++ S+ ++
Sbjct: 181 RLAQVDIEAPSGAGGMPGVIIPRKTVGELQKLLGEEADNDVCIELSDTKIRFSVGSVILT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L +N  +   AVDRVS +SS R  AVKL++    L   
Sbjct: 241 SKLIDGVFPEYQRVIPLGNDKKLVINRQDFSSAVDRVSTISSDRGCAVKLTIEKGLLRFV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y    ++I FN +YLL+I   ISS      E++F L    +   
Sbjct: 301 VNNPDSGSAEDQLVADYASDLLEIGFNSRYLLDIAAQISSH-----EMIFMLADPGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IRG             NA YVLMP+R+
Sbjct: 356 IRGNGD---------TNALYVLMPIRV 373


>gi|145297126|ref|YP_001139967.1| DNA polymerase III beta-subunit [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142849898|gb|ABO88219.1| DNA polymerase III beta-subunit [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 367

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ + R  +L  L      +  + T+P+  +VLL  + GLL +  +  E+E+ G +  +
Sbjct: 1   MQLEISREALLRPLQLVSGALGGRPTLPILGNVLLDVSQGLLSLTGTDLEVEMIGQVYLN 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  TV A  L DI R L +GA I    E E    + I  G S F L + P SE+P
Sbjct: 61  NESQDGRTTVPARKLLDICRGLPEGADIRLNTEGE---RLIIRSGRSRFNLSTLPASEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ E V  F++    LK L++ T F+MA++++RYYLNG+ F    E   L  VATDGH
Sbjct: 118 NIEDWESVLEFDIGQLELKKLIDATQFSMASQDVRYYLNGMLFE--SEGHGLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA    ++V +      +I+PRK V E++R+L ++D  V++ +  S +   ++    + 
Sbjct: 176 RLATCRREVVEESLPDHQVILPRKGVLELVRLLEAEDKPVRLQIGRSNLRAALDGFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+++ VIP ++DK L     +LRQA  R +I+S+ + + V+L+L  + L +T 
Sbjct: 236 KLVDGRFPDWRRVIPRNSDKALIAGREDLRQAFARAAILSNEKFRGVRLNLQENLLRITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       D++   L  S SS  I
Sbjct: 296 NNPEQEEAEELLDVQYEASEMEIGFNVSYVLDVLNTLKC-----DQIRISLSDSISSAII 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D           +A YV+MPMRI
Sbjct: 351 EDFDH---------QDAQYVVMPMRI 367


>gi|238754005|ref|ZP_04615364.1| DNA polymerase III subunit beta [Yersinia ruckeri ATCC 29473]
 gi|238707757|gb|EEQ00116.1| DNA polymerase III subunit beta [Yersinia ruckeri ATCC 29473]
          Length = 366

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  HPHEQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFMLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYEGTEMEIGFNVSYVLDVLNTLKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDSASQAAA---------YVVMPMRL 366


>gi|242237462|ref|YP_002985643.1| DNA polymerase III subunit beta [Dickeya dadantii Ech703]
 gi|242129519|gb|ACS83821.1| DNA polymerase III, beta subunit [Dickeya dadantii Ech703]
          Length = 366

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  VER  +L+ L      +  + T+P+  ++LLQ ++G L +  +  E+E+   +   
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGRLSLTGTDLEMEMVAHVTLT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A  L+DI R L DGA+I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPDGAEITVTLE---GDRMLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +   +FEL  + LK L+E T F+MA +++RYYLNG+ F  + +   L  VATDGH
Sbjct: 118 NLDDWQSEVAFELPQATLKRLIEATQFSMAHQDVRYYLNGMLFETSGD--GLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    S+IVPRK V E++R+L   ++ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPVGQPLPSH-SVIVPRKGVMELVRLLDGGETPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  LRQA  R +I+S+ + + V+L L+ ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLRQAFARAAILSNEKFRGVRLYLNQNQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L    SSV +
Sbjct: 295 NNPEQEEAEEILDVEYGGTEMEIGFNVSYVLDVLNALKC-----EDVRMLLADPASSVQL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 ED---------CASQAAAYVVMPMRL 366


>gi|293393722|ref|ZP_06638030.1| DNA-directed DNA polymerase III beta subunit [Serratia odorifera
           DSM 4582]
 gi|291423766|gb|EFE96987.1| DNA-directed DNA polymerase III beta subunit [Serratia odorifera
           DSM 4582]
          Length = 366

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   + E    + +  G S F L + P ++FP
Sbjct: 61  QPHEAGATTVPARKFFDICRGLPEGAEITVQLDGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q+    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMPIGQQLPSH-SVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVIYEGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDGASKSAA---------YVVMPMRL 366


>gi|325275333|ref|ZP_08141284.1| DNA polymerase III subunit beta [Pseudomonas sp. TJI-51]
 gi|324099524|gb|EGB97419.1| DNA polymerase III subunit beta [Pseudomonas sp. TJI-51]
          Length = 367

 Score =  271 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 209/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQ---KLLLKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AV+TDGH
Sbjct: 118 TVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRN--TLRAVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    +      +IVPRK + E+ R+L+  +  V + L +  I       + + 
Sbjct: 176 RLALCSMTAPIEQDDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R SI+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKVVVGDRQALREAFSRTSILSNEKYRGIRLQLAAGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVDYDGSSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +    D         ++ YV+MPMR+
Sbjct: 351 QEAGND---------DSSYVVMPMRL 367


>gi|229587580|ref|YP_002869699.1| DNA polymerase III subunit beta [Pseudomonas fluorescens SBW25]
 gi|229359446|emb|CAY46287.1| DNA polymerase III, beta chain [Pseudomonas fluorescens SBW25]
          Length = 367

 Score =  271 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 209/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    +     ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDE---AKLVVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++E    + AVATDGH
Sbjct: 118 TVEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGI--IRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +           +IVPRK + E+ R+L+  + +V + L +  I       + + 
Sbjct: 176 RLAMCSMRADIGQPDRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|37524034|ref|NP_927378.1| DNA polymerase III subunit beta [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783457|emb|CAE12297.1| DNA polymerase III, beta chain [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 366

 Score =  271 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 131/386 (33%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREQLLKPLQQVSSPLSGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMMARVTLS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +    G+ TV A   +DI R L DGA+IS   +   G  + +  G S F L + P S+FP
Sbjct: 61  LPHEVGATTVPARKFFDIWRGLPDGAEISVELD---GDRLLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFSLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  ++    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMGIGQKLPSH-SVIVPRKGVIELMRLLDGGDTPLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  NC  L+QA  R +I+S+ + + V+L  S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEANCDMLKQAFSRAAILSNEKFRGVRLYFSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       +EV   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVSYQGAEMEIGFNVSYVLDVLNTLRC-----EEVRLLLTDAISSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          NA YV+MPMR+
Sbjct: 350 ED---------CANHNAAYVVMPMRL 366


>gi|52424541|ref|YP_087678.1| DNA polymerase III subunit beta [Mannheimia succiniciproducens
           MBEL55E]
 gi|52306593|gb|AAU37093.1| DnaN protein [Mannheimia succiniciproducens MBEL55E]
          Length = 370

 Score =  271 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 199/385 (51%), Gaps = 20/385 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  V R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++      
Sbjct: 6   MQFIVSRDNLLKPLQQVCGVLSSRPNIPVLNNVLLQIADDCLTITGTDLEVELSTQAKLI 65

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G  T+ A    DI R L D A+I    E E      +    + F L + P  E+P+
Sbjct: 66  SGTEGKFTIPAKKFLDICRSLPDEAEIHVTFEEE---RAIVRSARTKFNLATLPAEEYPN 122

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             + +    F    + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGHR
Sbjct: 123 LADWQSEVDFTTEQATLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGHR 180

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LAV  + +   +    S+IVPRK V E+ R+L + D+  ++ +  + + + + ++  + +
Sbjct: 181 LAVCTIALEQDLQNH-SVIVPRKGVLELARLLEATDAPARLQIGTNNLRVQLANVVFTSK 239

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+Y+ V+P + D  L  +   L+QA  R +I+S+ R ++V+L L  +++ +T  
Sbjct: 240 LIDGRFPDYRRVLPRNADHILEADWDVLKQAFVRAAILSTERFRSVRLQLDQNQMKITAT 299

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A E ++V Y+   M++ FN  Y+L++++ +         V  RL  ++SS  I 
Sbjct: 300 NPEQEEAEEIIDVSYSGNEMEVGFNVSYILDVLNALKCQ-----RVRMRLTDASSSCLIE 354

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             +  S           YV+MPMR+
Sbjct: 355 NCEDASAE---------YVIMPMRL 370


>gi|294138803|ref|YP_003554781.1| DNA polymerase III subunit beta [Shewanella violacea DSS12]
 gi|293325272|dbj|BAJ00003.1| DNA polymerase III, beta subunit [Shewanella violacea DSS12]
          Length = 366

 Score =  271 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVNGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQVQLE 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            DV  G ITV A    DIV+ L D  ++   ++      + +  G S F L + P  E+P
Sbjct: 61  GDVVEGRITVPAKKFLDIVKSLPDQVELKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F +    LK+L++ T F+MA +++RYYLNG+    +     L A+ATDGH
Sbjct: 118 NVEAFQSDIEFTIKQGTLKSLIDATQFSMANQDVRYYLNGLLLETDGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I A + +   +IVPRK V E+ R+   +D  V +++ ++ I     S  ++ 
Sbjct: 176 RLALSHRQIEATLPE-KQVIVPRKGVVELQRLFEGEDLDVTIAIGDNAIRATTSSAVLTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L ++ L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKVVIASRNQLKQALLRASILSNEKFRGVRVQLENNLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+  P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEIIDVEYDNTPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         ++ YV+MPMR+
Sbjct: 350 ENHIEE---------DSMYVVMPMRL 366


>gi|270264120|ref|ZP_06192387.1| DNA polymerase III, beta subunit [Serratia odorifera 4Rx13]
 gi|270041769|gb|EFA14866.1| DNA polymerase III, beta subunit [Serratia odorifera 4Rx13]
          Length = 366

 Score =  271 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGCLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E+E    + +  G S F L + P  +FP
Sbjct: 61  QPHEAGATTVPARKFFDICRGLPEGAEIAVTLESE---RMLVRSGRSRFSLSTLPAVDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q+    S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPIGQQLPSH-SVIVPRKGVMELVRLLDGGDTLLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDGASQAAA---------YVVMPMRL 366


>gi|290473096|ref|YP_003465957.1| DNA polymerase III subunit beta [Xenorhabdus bovienii SS-2004]
 gi|289172390|emb|CBJ79157.1| DNA polymerase III, beta-subunit [Xenorhabdus bovienii SS-2004]
          Length = 366

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +  L +  +  E+E+   +   
Sbjct: 1   MKFIIEREQLLKPLQQVSSPLGGRPTLPILGNLLLQVTESSLLLTGTDLEMEMKARVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A   +DI R L DGA+IS   +   G  + +  G S F L + P S+FP
Sbjct: 61  QPHEQGATTIPARKFFDIWRGLPDGAEISVELD---GDRILVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F   EE  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFSLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEEE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  ++I   +    S+IVPRK V E++R+L   DS +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMNIGQNLPSH-SVIVPRKGVIELMRLLDGGDSLLQLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  NC  L+QA  R +I+S+ + + V++ LS ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEANCDVLKQAFSRAAILSNEKFRGVRIYLSENQLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  + SSV I
Sbjct: 295 NNPEQEEAEEIVDVSYQGTEMEIGFNVSYVLDVLNALKC-----EQVSLLLTDATSSVKI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                           A YV+MPMR+
Sbjct: 350 E---------NSASQAATYVVMPMRL 366


>gi|167621943|ref|YP_001672237.1| DNA polymerase III subunit beta [Shewanella halifaxensis HAW-EB4]
 gi|167351965|gb|ABZ74578.1| DNA polymerase III, beta subunit [Shewanella halifaxensis HAW-EB4]
          Length = 366

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/386 (28%), Positives = 205/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGEVQLE 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +V  G  TV A    DIV+ L D  ++   ++      + +  G S F L + P  E+P
Sbjct: 61  GEVVEGRTTVPAKKFLDIVKSLPDQVELKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +    E    F L    +K+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVDAFEAEIEFTLKQGTMKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I A + +   I+  +  +  +     + D  V +++ ++ I     +   + 
Sbjct: 176 RLALSHRMIEASLPEKQVIVPRKGVLELMRS-FEADDLDVTIAIGDNAIRATTATAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L ++ + +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRLQLKQALLRASILSNEKFRGVRVQLENNLIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y   P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEILDVEYENTPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                    +   + ++ YV+MPMR+
Sbjct: 350 ---------DNHIEQDSMYVVMPMRL 366


>gi|89074701|ref|ZP_01161159.1| DNA polymerase III subunit beta [Photobacterium sp. SKA34]
 gi|89049465|gb|EAR55026.1| DNA polymerase III subunit beta [Photobacterium sp. SKA34]
          Length = 366

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK TVER  +L+ L      +  + ++P+  ++LL+  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREYLLKPLQQVAAALGGRPSLPILGNILLKVEDGCLSMTGTDLEVELIAKVVLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G++TV +    DI R L   A IS   E   G  V I    S + L + P ++FP
Sbjct: 61  GDYESGTVTVPSRKFLDICRGLPSNATISVSYE---GDRVLIRSSRSRYTLTTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +   +F L    ++ L++ T F+MA +++RYYLNG+ F    +   L +VATDGH
Sbjct: 118 NIEDWQSEVAFTLEQGRMRQLIDSTQFSMANQDVRYYLNGMLFE--TDGQHLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  +D   ++     +IVPRK V E++R+  + +S V + +  S I   + +   + 
Sbjct: 176 RMAVCAIDTGHELP-TKQVIVPRKGVLELVRLFDNPESLVNIQIGNSNIRATVNNFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P ++ K +   C  +R A  R +I+S+ + + V+++LS+ ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMPQNSTKFVEAGCEEMRNAFARAAILSNEKFRGVRVNLSNGEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +       D+V   L  +N+   I
Sbjct: 295 NNPEQEEAEEFLDVDYQGDSLEIGFNVSYVLDVLNTLKC-----DQVRLSLSDANAPSLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D          A YV+MP+R+
Sbjct: 350 EDATNDE---------AMYVVMPIRL 366


>gi|238797844|ref|ZP_04641336.1| DNA polymerase III subunit beta [Yersinia mollaretii ATCC 43969]
 gi|238718260|gb|EEQ10084.1| DNA polymerase III subunit beta [Yersinia mollaretii ATCC 43969]
          Length = 366

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLEMEMVACVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P  +FP
Sbjct: 61  QPHEQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAVDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSDVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDGASQAAA---------YVVMPMRL 366


>gi|85057980|ref|YP_453682.1| DNA polymerase III subunit beta [Sodalis glossinidius str.
           'morsitans']
 gi|84778500|dbj|BAE73277.1| DNA polymerase III beta subunit protein DnaN [Sodalis glossinidius
           str. 'morsitans']
          Length = 366

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER  +L+ L      +  + T+P+  ++LLQ ++  L +  +  E+E+   +  S
Sbjct: 1   MKFIVEREQLLKPLQQVSSPLGGRPTLPILGNLLLQVSEDRLLLTGTDLEMEMVAQVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + I  G S + L + P S FP
Sbjct: 61  AAHEPGATTVPARKFFDICRGLPEGAEIAVTLEGE---RMLIRSGRSRYSLSTLPASNFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L+ S+LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLSQSILKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  +     S+IVPRK V E++R+L   ++ VK+ +  + I  ++     + 
Sbjct: 176 RLAVCAMSV-GEALPSHSVIVPRKGVMELVRMLDGGENPVKLQIGSNNIRASVGDYIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L LS+++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDVLKQAFARAAILSNEKFRGVRLYLSANQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       +EV   L    SSV I
Sbjct: 295 NNPEQEEAEEILDVTYQGSEMEIGFNVSYVLDVLNALKC-----EEVRLLLTDGVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDSASQAAA---------YVVMPMRL 366


>gi|238783049|ref|ZP_04627076.1| DNA polymerase III subunit beta [Yersinia bercovieri ATCC 43970]
 gi|238716050|gb|EEQ08035.1| DNA polymerase III subunit beta [Yersinia bercovieri ATCC 43970]
          Length = 366

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 212/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLEMEMVACVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P  +FP
Sbjct: 61  QPHEQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAVDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L  +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDGASQAAA---------YVVMPMRL 366


>gi|258542325|ref|YP_003187758.1| DNA polymerase III subunit beta [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633403|dbj|BAH99378.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636462|dbj|BAI02431.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639515|dbj|BAI05477.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642571|dbj|BAI08526.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645626|dbj|BAI11574.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648679|dbj|BAI14620.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651732|dbj|BAI17666.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654723|dbj|BAI20650.1| DNA polymerase III beta subunit [Acetobacter pasteurianus IFO
           3283-12]
          Length = 374

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 144/390 (36%), Positives = 221/390 (56%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK + ER+ +L+ L H   + E++NTIP+  +VL+QA +G L +KA+  EIE+   +PA 
Sbjct: 1   MKFSAERATLLKALAHIQSVAEKRNTIPILANVLIQAANGQLSLKATDMEIEVVEEVPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G+ T  A +LY+IVRKL DG  +   + +  G  + +  G     L      +FPS
Sbjct: 61  ITREGATTAPAAVLYEIVRKLPDGVDVELDQADSEGP-LLLRAGRYATRLNVLSVDDFPS 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               ++ + F+L ++ L +L++RT FA++TEE RYYLNGIF H    + + KL AVATDG
Sbjct: 120 MGAGDFPHRFKLPATTLHSLIDRTRFAISTEETRYYLNGIFLHGTEVDGEAKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E D+ A  A MP +IVPRK V E+ +++      V+++LSE+RI      ++++
Sbjct: 180 HRLARVEADLPAGAAGMPGVIVPRKTVAEVRKLIDEAPEEVEIALSETRIQFTAGPVTLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP Y+ VIP +N + LRV   +   AV RV+ +S  R + VKL+L    L ++
Sbjct: 240 SKLIDGTFPEYERVIPRNNTRILRVGKKDFADAVARVAAISQERSRPVKLTLEPGLLTLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             + + G A E ++   + Y+   ++I F  +YL +I D +        EV F    S S
Sbjct: 300 ASSAEQGVAKEELDDNRISYDAEGLEIGFQARYLNDITDQVE------KEVEFAFADSAS 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R  D           +A YVLMPMR+
Sbjct: 354 PTIVRDVD---------SPSALYVLMPMRV 374


>gi|121601944|ref|YP_989527.1| DNA polymerase III subunit beta [Bartonella bacilliformis KC583]
 gi|120614121|gb|ABM44722.1| DNA polymerase III, beta subunit [Bartonella bacilliformis KC583]
          Length = 373

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 161/387 (41%), Positives = 243/387 (62%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T++R+  L+ LG   R++ER+NT+P+  +VL+ A+   + +KA+  ++EIT      
Sbjct: 1   MRVTIDRNQFLKSLGCVHRVVERRNTVPILSNVLIDADSDGMRLKATDLDLEITEFSVPH 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           ++  G ITV AHLLYDIVRKL DG +I    + +    +++  G +NF LQ FP+ +FP 
Sbjct: 61  IEQTGGITVPAHLLYDIVRKLPDGNEIILAVDADRPNTMSVISGFANFRLQGFPKMDFPE 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL-KLCAVATDGH 179
           +   ++ + F L +S LK+L++ T FA++TEE RYYLNGI+FHI  +   KL  VATDGH
Sbjct: 121 SLPGQFNFRFSLLASDLKHLLDCTQFAISTEETRYYLNGIYFHIVNDGALKLRLVATDGH 180

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMS 238
           RLA  +++  +    MP +I+PRK VGE+ R+LS + D+ V + LSE++I  ++ S+ ++
Sbjct: 181 RLAQVDMEAPSGSEGMPGVIIPRKTVGELQRLLSEEADNYVCIELSETKIRFSVGSVVLT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP YQ VIP  NDK+L VN  +    VDRVS +SS R +AVKL++ + +L   
Sbjct: 241 SKLIDGTFPEYQRVIPLGNDKKLTVNRRDFSSTVDRVSTISSDRGRAVKLTIENGQLRFV 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V+NPD G A + +   Y   P++I FN +YLL+I   +S      DE+VF LD + +   
Sbjct: 301 VNNPDSGSAEDQLVADYASDPLEIGFNSRYLLDIAAQLSG-----DEIVFMLDEAGAPAL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           IR              NA YVLMP+R+
Sbjct: 356 IRDSHD---------TNALYVLMPIRV 373


>gi|114045515|ref|YP_736065.1| DNA polymerase III subunit beta [Shewanella sp. MR-7]
 gi|113886957|gb|ABI41008.1| DNA polymerase III, beta subunit [Shewanella sp. MR-7]
          Length = 366

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L   C  +ER++ +P+  ++L++ +   L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQAVVH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DIV+ L + +     K  +   +  +  G S F L + P  E+P
Sbjct: 61  GDIEEGRTTVPAKKLLDIVKSLPEQS---ELKVEQQDNKWLLRSGRSRFSLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F L   VLK+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVEAFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I AQ+ +   +IVPRK V E+ R+L + D  + +++ ++ I     +   + 
Sbjct: 176 RLALSHRTIDAQLPE-KQVIVPRKGVMEMARLLEADDLDIAIAIGDNAIRATTSTTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  + +QA+ R SI+S+ + + V++ L +  L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN  P++I FN  YLL++++N+ S     D+V   L   NSS  +
Sbjct: 295 NNPEQEEAEEIIDVDYNNQPLEIGFNVSYLLDVLNNLKS-----DDVRITLIDGNSSALL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                        + ++ YV+MPMR+
Sbjct: 350 E---------NHLEEDSMYVVMPMRL 366


>gi|238793144|ref|ZP_04636772.1| DNA polymerase III subunit beta [Yersinia intermedia ATCC 29909]
 gi|238727517|gb|EEQ19043.1| DNA polymerase III subunit beta [Yersinia intermedia ATCC 29909]
          Length = 366

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +   
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +    G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  NPHTQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYEGTEMEIGFNVSYVLDVLNALKC-----EDVRLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDGASQAAA---------YVVMPMRL 366


>gi|308047724|ref|YP_003911290.1| DNA polymerase III, beta subunit [Ferrimonas balearica DSM 9799]
 gi|307629914|gb|ADN74216.1| DNA polymerase III, beta subunit [Ferrimonas balearica DSM 9799]
          Length = 366

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 201/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  + R  +L+ L      +ER++ +P+  +VLL+ +  LL++  +  E+E+ G +   
Sbjct: 1   MQFVINRETLLKPLQLVSGAVERRHNLPILANVLLEVSGNLLKVTGTDLEVELIGQVEVE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A    DI + L D A++      +    + I  G S F L + P  EFP
Sbjct: 61  GDIQPGRTTVPARKFLDICKSLPDQAELRI---EQQDNRLLIKSGRSRFSLSTLPADEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
              + +    F L   VLK+L+E T F+MA +++RYYLNG+ F        L  VATDGH
Sbjct: 118 EIGDWKGELQFTLPQGVLKSLIEATQFSMAHQDVRYYLNGMLFETEGN--VLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV+   I A + +   +IVPRK V E+ R+   + + + + + ES I         + 
Sbjct: 176 RLAVSHRVIEASLPE-KQVIVPRKGVIELSRLFEDEQAEITLCIGESSIRAVTRDAIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +      LRQA  R SI+S+ + + V+L L +D+L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKDGDKVVVAERDALRQAFARASILSNEKFRGVRLLLENDRLTITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E +++ Y    ++I FN  Y+L++++ +       + V   L  +NSS   
Sbjct: 295 NNPEQEEAEEVLDLAYPYTSLEIGFNVSYVLDVLNALK-----QENVKMVLGEANSSALF 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D D          + YV+MPMR+
Sbjct: 350 ENADNDE---------SLYVVMPMRL 366


>gi|310816810|ref|YP_003964774.1| DNA polymerase III, beta subunit [Ketogulonicigenium vulgare Y25]
 gi|308755545|gb|ADO43474.1| DNA polymerase III, beta subunit [Ketogulonicigenium vulgare Y25]
          Length = 372

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 229/387 (59%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ERS +L+ +  A  ++ER+N IP+  +VL+ A    ++ +A+  +IE+  +  A 
Sbjct: 1   MKFSIERSALLKAVAQAQSVVERRNAIPILSNVLIAAEGAAVQFRATDLDIEVQDSAVAM 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A +L +IVRKL DGA ++   +      + I+ G S F L + P+ +FP+
Sbjct: 61  VEQAGAATVNAAMLNEIVRKLPDGALVAITYDP-SAERLTIAAGRSTFTLATLPQQDFPA 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
               ++  SF   + +L+ L +++ FA++TEE RYYLNG++FHI   +    L AVATDG
Sbjct: 120 MASADFEASFTAPAPLLRRLFDKSKFAISTEETRYYLNGVYFHIATGEEGPVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  +  +    A MP +IVPRK VGE+ ++L   ++ + VS+SE++I     +++++
Sbjct: 180 HRLARIDAPLPDGAAGMPGVIVPRKTVGELRKLLDDDNALIAVSVSETKIRFATPNITLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKL+L  D+L ++
Sbjct: 240 SKVIDGTFPDYTRVIPTGNTRRLEVDAAEFAKAVDRVATVSSERSRAVKLALEDDRLLLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V +PD G A E + V Y +  ++I FN KYL EI   +       +  VF L+       
Sbjct: 300 VQSPDTGAAEEELVVAYADERLEIGFNAKYLQEIAAQVD-----RENAVFMLNGPGDPAL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R         +    +A YV+MPMR+
Sbjct: 355 MR---------EGGDTSAVYVVMPMRV 372


>gi|311277334|ref|YP_003939565.1| DNA polymerase III, beta subunit [Enterobacter cloacae SCF1]
 gi|308746529|gb|ADO46281.1| DNA polymerase III, beta subunit [Enterobacter cloacae SCF1]
          Length = 366

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E   G  + +  G S F L + P ++FP
Sbjct: 61  QPHNAGATTVPARKFFDICRGLPEGAEIAVQLE---GDRMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F +A + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTVAQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I   +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCAMPIGETLPNH-SVIVPRKGVIELMRMLDGGDTPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLDAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYAGAEMEIGFNVSYVLDVLNALKC-----ENVRILLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366


>gi|329113488|ref|ZP_08242269.1| DNA polymerase III subunit beta [Acetobacter pomorum DM001]
 gi|326697313|gb|EGE48973.1| DNA polymerase III subunit beta [Acetobacter pomorum DM001]
          Length = 374

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 144/390 (36%), Positives = 222/390 (56%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK + ER+ +L+ L H   + E++NTIP+  +VL+QA +G L +KA+  EIE+   +PA+
Sbjct: 1   MKFSAERATLLKALAHIQSVAEKRNTIPILANVLIQAANGQLSLKATDMEIEVVEGVPAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G+ T  A +LY+IVRKL DG  +   + +  G  + +  G     L      +FPS
Sbjct: 61  ITREGATTAPASVLYEIVRKLPDGVDVELDQADSEGP-LLLRAGRYATRLNVLSVDDFPS 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
               ++ Y F+L ++ L +L++RT FA++TEE RYYLNGIF H    + + KL AVATDG
Sbjct: 120 MGAGDFPYRFKLPATTLHSLIDRTRFAISTEETRYYLNGIFLHGTEVDGEPKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E D+ +  A MP +IVPRK V E+ +++      V+++LSE+RI      ++++
Sbjct: 180 HRLARVEADLPSGAAGMPGVIVPRKTVAEVRKLIDEAPEEVEIALSETRIQFTAGPVTLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP Y+ VIP +N + LRV   +   AV RV+ +S  R + VKL+L    L ++
Sbjct: 240 SKLIDGTFPEYERVIPRNNTRILRVGKKDFADAVARVAAISQERSRPVKLTLEPGLLTLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             + + G A E ++   + Y+   ++I F  +YL +I D +        EV F    S S
Sbjct: 300 ASSTEQGMAKEELDDNRISYDAEGLEIGFQARYLNDITDQVE------KEVEFAFADSAS 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R  D           +A YVLMPMR+
Sbjct: 354 PTIVRDVD---------SPSALYVLMPMRV 374


>gi|157373148|ref|YP_001471748.1| DNA-directed DNA polymerase [Shewanella sediminis HAW-EB3]
 gi|157315522|gb|ABV34620.1| DNA-directed DNA polymerase [Shewanella sediminis HAW-EB3]
          Length = 366

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVTGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQVQLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  T+ A    DIV+ L D  ++   ++      + +  G S F L + P  E+P
Sbjct: 61  GDVQEGRTTIPAKKFLDIVKSLPDQVELKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F +    LK+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVEAFQADIEFTIKQGTLKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   +   + +   +IVPRK V E+ R+   +D  + +++ ++ I     S   + 
Sbjct: 176 RLALSHRMVEESLPE-KQVIVPRKGVVELQRLFEGEDLDITIAIGDNAIRATTGSAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  +L+QA+ R SI+S+ + + V++ L ++ + +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLENNLIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y   P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEILDVEYENTPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         N+ YV+MPMR+
Sbjct: 350 ENHIEE---------NSMYVVMPMRL 366


>gi|26986756|ref|NP_742181.1| DNA polymerase III subunit beta [Pseudomonas putida KT2440]
 gi|148545261|ref|YP_001265363.1| DNA polymerase III subunit beta [Pseudomonas putida F1]
 gi|60392201|sp|P0A120|DPO3B_PSEPK RecName: Full=DNA polymerase III subunit beta
 gi|60392202|sp|P0A121|DPO3B_PSEPU RecName: Full=DNA polymerase III subunit beta
 gi|24981347|gb|AAN65645.1|AE016191_2 DNA polymerase III, beta subunit [Pseudomonas putida KT2440]
 gi|45691|emb|CAA32894.1| unnamed protein product [Pseudomonas putida]
 gi|148509319|gb|ABQ76179.1| DNA polymerase III, beta subunit [Pseudomonas putida F1]
 gi|313496419|gb|ADR57785.1| DnaN [Pseudomonas putida BIRD-1]
          Length = 367

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AV+TDGH
Sbjct: 118 TVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRN--TLRAVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    +      +IVPRK + E+ R+L+  +  V + L +  I       + + 
Sbjct: 176 RLALCSMSAPIEQEDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +    D         ++ YV+MPMR+
Sbjct: 351 QEAGND---------DSSYVVMPMRL 367


>gi|113968348|ref|YP_732141.1| DNA polymerase III subunit beta [Shewanella sp. MR-4]
 gi|117918469|ref|YP_867661.1| DNA polymerase III subunit beta [Shewanella sp. ANA-3]
 gi|113883032|gb|ABI37084.1| DNA polymerase III, beta subunit [Shewanella sp. MR-4]
 gi|117610801|gb|ABK46255.1| DNA polymerase III, beta subunit [Shewanella sp. ANA-3]
          Length = 366

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L   C  +ER++ +P+  ++L++ +   L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQAVIH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DIV+ L + +     K  +   +  +  G S F L + P  E+P
Sbjct: 61  GDIEEGRTTVPAKKLLDIVKSLPEQS---ELKVEQQDNKWLLRSGRSRFSLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F L   VLK+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVEAFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I AQ+ +   +IVPRK V E+ R+L + D  + +++ ++ I     +   + 
Sbjct: 176 RLALSHRTIDAQLPE-KQVIVPRKGVMEMARLLEADDLDIAIAIGDNAIRATTSTTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  + +QA+ R SI+S+ + + V++ L +  L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN  P++I FN  YLL++++N+ S     D+V   L   NSS  +
Sbjct: 295 NNPEQEEAEEIIDVDYNNQPLEIGFNVSYLLDVLNNLKS-----DDVRITLIDGNSSALL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                        + ++ YV+MPMR+
Sbjct: 350 E---------NHLEEDSMYVVMPMRL 366


>gi|212632926|ref|YP_002309451.1| DNA polymerase III subunit beta [Shewanella piezotolerans WP3]
 gi|212554410|gb|ACJ26864.1| DNA polymerase III, beta subunit [Shewanella piezotolerans WP3]
          Length = 366

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 108/386 (27%), Positives = 205/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSAHSLKLTGTDLEVELVGEVLLE 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +V  G  TV A    DIV+ L D  ++   ++      + +  G S F L + P  E+P
Sbjct: 61  GEVFEGRTTVPAKKFLDIVKSLPDQVELKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  E    F L    +K+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVEAFEAELEFTLKQGTMKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I A + +   I+  +  +  +       +  V +++ ++ I     +   + 
Sbjct: 176 RLALSHRMIEASLPEKQVIVPRKGVLELMRS-FEGDELDVTIAIGDNAIRATTATAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L ++ + +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRQQLKQALLRASILSNEKFRGVRVQLENNLIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y   P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEILDVEYENTPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                    +   + ++ YV+MPMR+
Sbjct: 350 ---------DNHVEQDSMYVVMPMRL 366


>gi|312882234|ref|ZP_07741980.1| DNA polymerase III subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370078|gb|EFP97584.1| DNA polymerase III subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 366

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++RS +L+ L      +  + T+P+  ++LL+  DG+L I A+  E+E+   +   
Sbjct: 1   MKFSIQRSHLLKPLQQVSGALGGRPTLPILGNLLLKVADGMLLITATDLEVELISRVNLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ITV +    DI R L D A I+F  E   G  V I  G S F L + P  +FP
Sbjct: 61  GEFEAGTITVPSRKFLDICRGLPDEAVITFVLE---GDRVQIRSGRSRFSLSTLPAHDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ LVE+T F+MA +++RYYLNG+ F    +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQAELRTLVEKTQFSMANQDVRYYLNGMLFE--LDGTTLSSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+A+A+V++  + A+   IIVPRK V E++++L + +  V + +  S +   + +   + 
Sbjct: 176 RMAMAQVNLEGEFAQQ-QIIVPRKGVLELVKLLDAPEQKVVLQVGSSNVRAEVNNYVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+  +  K L  +C  L+ A  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVMSLTPSKTLLADCDQLKHAFSRAAILSNEKFRGVRVNLTDSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  Y+L++++ +  +     EV   +  + SS  I
Sbjct: 295 NNPEQEEAEEILDVNYQGEAIEIGFNVGYVLDVLNTLKCN-----EVRVSMTDATSSTLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                +S         A YV+ P+R+
Sbjct: 350 ENAQDNS---------AVYVVSPIRL 366


>gi|238765485|ref|ZP_04626404.1| DNA polymerase III subunit beta [Yersinia kristensenii ATCC 33638]
 gi|238696309|gb|EEP89107.1| DNA polymerase III subunit beta [Yersinia kristensenii ATCC 33638]
          Length = 366

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GAQI+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHEQGATTVPARKFFDIWRGLPEGAQITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L+ +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLKASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGAEMEIGFNVSYVLDVLNALKC-----EDVSLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDGASQAAA---------YVVMPMRL 366


>gi|123444341|ref|YP_001008306.1| DNA polymerase III subunit beta [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332163520|ref|YP_004300097.1| DNA polymerase III subunit beta [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122091302|emb|CAL14188.1| DNA polymerase III, beta subunit protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318608024|emb|CBY29522.1| DNA polymerase III beta subunit [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667750|gb|ADZ44394.1| DNA polymerase III subunit beta [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 366

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  HPHEQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCAMPI-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L+ +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLKASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGAEMEIGFNVSYVLDVLNALKC-----EDVSLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +           YV+MPMR+
Sbjct: 350 EDGASQAAA---------YVVMPMRL 366


>gi|302381118|ref|YP_003816941.1| DNA polymerase III subunit beta [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191746|gb|ADK99317.1| DNA polymerase III, beta subunit [Brevundimonas subvibrioides ATCC
           15264]
          Length = 372

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 137/387 (35%), Positives = 211/387 (54%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS +L+ LGH   ++ER+NTIP+  +VLL A    L   A+  ++EI     A+
Sbjct: 1   MQLTIERSALLKALGHVQSVVERRNTIPILSNVLLSAGRDRLSFAATDLDMEIVDEADAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V V G IT  AH LY+IVRKL DGA+++     +    + +  G S F L   P  +FP 
Sbjct: 61  VQVEGQITAPAHTLYEIVRKLPDGAEVALTYNGDD-PRLTVQAGRSKFNLPVLPAGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
              ++    F L    L  L+++T FA++TEE RYYLNG++ H         L AVATDG
Sbjct: 120 MSTDQSGARFTLMKDDLARLIDKTRFAVSTEETRYYLNGLYLHTVAEGGIPLLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE       A  P +IVPRK + ++ R+L      V++S+S  +I       S++
Sbjct: 180 HRLALAETPAPEGAAGGPGVIVPRKTIDQVRRLLDDGTGPVEISVSPQKIRFEFGQASLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  NDK+  ++      AVDRV+ +S+ + ++VKL+   D++ +T
Sbjct: 240 SKVIDGAFPDYMRVIPKGNDKQADIDNAVFASAVDRVATISAEKSRSVKLAFELDRVTLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+ +E + + Y+E P +I FN +YLL++   I+      +   F      S   
Sbjct: 300 VRNMEAGQGVEEVEIGYSEAPFEIGFNARYLLDVAGQITG-----ENATFLFADPASPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +                  YVLMP+R+
Sbjct: 355 VLDPGDPGVQ---------YVLMPLRV 372


>gi|163802134|ref|ZP_02196029.1| DNA polymerase III subunit beta [Vibrio sp. AND4]
 gi|159173939|gb|EDP58749.1| DNA polymerase III subunit beta [Vibrio sp. AND4]
          Length = 366

 Score =  269 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 219/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + T+P+  ++LL+  D +L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLLKVEDNVLSMTATDLEVELVSKVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   GSITV +    DI R L D + I+F  E   G  V +    S F L + P ++FP
Sbjct: 61  GDFEAGSITVPSRKFLDICRGLPDDSIITFVLE---GDRVQVRSSRSRFSLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  S L++LVE+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVEVSLTQSDLRSLVEKTQFSMANQDVRYYLNGMLFEI--DGSTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV++  + A  A+   IIVPRK + E+++++ + +  V + +  S +   + +   + 
Sbjct: 176 RMAVSQTQLGADFAQ-KQIIVPRKGIQELVKLMDAPEQPVVLQIGSSNVRAEVNNFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P S +K L   C  LRQA  R +I+S+ + + V+++L+  ++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQSTNKTLETGCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +    ++I FN  Y+L++++ +       D+V   +  +N+S  I
Sbjct: 295 NNPEQEEAEEILDVTFEGDAIEIGFNVSYVLDVLNTLRC-----DKVRVSMSDANASALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D DS         A YV+MP+R+
Sbjct: 350 ENADDDS---------AMYVVMPIRL 366


>gi|167031025|ref|YP_001666256.1| DNA polymerase III subunit beta [Pseudomonas putida GB-1]
 gi|166857513|gb|ABY95920.1| DNA polymerase III, beta subunit [Pseudomonas putida GB-1]
          Length = 367

 Score =  269 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AV+TDGH
Sbjct: 118 TAEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRN--TLRAVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    +      +IVPRK + E+ R+L+  +  V + L +  I       + + 
Sbjct: 176 RLALCSMTAPIEQDDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVDYKGSSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +    D         ++ YV+MPMR+
Sbjct: 351 QEAGND---------DSSYVVMPMRL 367


>gi|238787827|ref|ZP_04631624.1| DNA polymerase III subunit beta [Yersinia frederiksenii ATCC 33641]
 gi|238724170|gb|EEQ15813.1| DNA polymerase III subunit beta [Yersinia frederiksenii ATCC 33641]
          Length = 366

 Score =  269 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 215/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LLQ  +G L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   +   G  + +  G S F L + P ++FP
Sbjct: 61  QPHTQGATTVPARKFFDIWRGLPEGAEITVALD---GDRLLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  Q     S+IVPRK V E++R+L   D+ +++ +  + I  ++     + 
Sbjct: 176 RLAVCSMPV-GQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L+ +C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKTLKASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       ++V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVSYDGAEMEIGFNVSYVLDVLNALKC-----EDVSLLLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  +           YV+MPMR+
Sbjct: 350 EDGNSQAAA---------YVVMPMRL 366


>gi|254417831|ref|ZP_05031555.1| DNA polymerase III, beta subunit [Brevundimonas sp. BAL3]
 gi|196184008|gb|EDX78984.1| DNA polymerase III, beta subunit [Brevundimonas sp. BAL3]
          Length = 372

 Score =  269 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 138/387 (35%), Positives = 217/387 (56%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS +L+ LGH   ++ER+NTIP+  +VLL A    L   A+  ++E+     A+
Sbjct: 1   MQLTIERSALLKALGHVQSVVERRNTIPILSNVLLSAGRDRLAFAATDLDMEMVDEAEAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+V G IT  AH LY+IVRKL +GA++S     +    + +S G S F L   P  +FP 
Sbjct: 61  VNVEGQITAPAHTLYEIVRKLPEGAEVSLLYSGDD-PRLVVSAGRSRFNLPVLPAGDFPI 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
              +    S+ +    L  L+++T FA++TEE RYYLNG++ H         L AVATDG
Sbjct: 120 MSTDSAGASYVMPKEDLARLIDKTRFAVSTEETRYYLNGLYLHTVAEAGVALLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE       A  P +IVPRK V ++ R+L      V++++S  +I   I   S++
Sbjct: 180 HRLALAETPAPEGAAGGPGVIVPRKTVDQVRRLLDDAAGPVEITVSAQKIRFQIGEASLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  NDK+  ++     +AVDRV+ +S+ + ++VKL+  +D++ +T
Sbjct: 240 SKVIDGAFPDYLRVIPKGNDKQADIDNALFAKAVDRVATISAEKSRSVKLAFDNDRVKLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A E + + Y++ P +I FN +YLL++   I+      +   FR     S   
Sbjct: 300 VRNMEAGQAEEEVEIGYSDEPFEIGFNARYLLDVAGQITG-----ENAAFRFADPASPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +                  YVLMP+R+
Sbjct: 355 VLDPGDPGVQ---------YVLMPLRV 372


>gi|260431697|ref|ZP_05785668.1| DNA polymerase III, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415525|gb|EEX08784.1| DNA polymerase III, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 373

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 146/388 (37%), Positives = 234/388 (60%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVSQAQSVVERRNTIPILANVLIEAEGDQVLFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   ++  G  + +  G SNF L + P+ +FP 
Sbjct: 61  VEKAGATTVAATTLHEIVRKLPDGALVTLTADSAAG-RLTVEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED---LKLCAVATD 177
               EY  +F  ++++L+ L +++ FA++TEE RYYLNG++ H+ +       L  VATD
Sbjct: 120 MASSEYQSNFTASAALLRRLFDKSKFAISTEETRYYLNGVYMHVADGPEGGKVLRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + D+ A    MP +IVPRK VGE+ ++L   D  + VS+SE+++      +++
Sbjct: 180 GHRLARIDADLPAGAEDMPGVIVPRKTVGELRKLLEDDDMDIAVSVSETKVRFATPDITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP +N ++L V+     QAVDRV+ +SS R +AVKL L +DKL +
Sbjct: 240 TSKVIDGTFPDYTRVIPQNNTRKLEVDAAEFAQAVDRVATVSSERSRAVKLQLENDKLVL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y +  ++I FN KYL EI   +       +  VF  +S+    
Sbjct: 300 SVNAPDSGAAEEELAVAYGDERLEIGFNAKYLQEIASQVD-----RENAVFLFNSAGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R         + N  +A YV+MPMR+
Sbjct: 355 LMR---------EGNDQSAVYVVMPMRV 373


>gi|117923320|ref|YP_863937.1| DNA polymerase III subunit beta [Magnetococcus sp. MC-1]
 gi|117607076|gb|ABK42531.1| DNA polymerase III, beta subunit [Magnetococcus sp. MC-1]
          Length = 376

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 120/393 (30%), Positives = 199/393 (50%), Gaps = 25/393 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  V R   L+ L     ++E++NT+P   + LL+A+   L + A+  E+ +    PA 
Sbjct: 1   MEFHVSREPFLKALQRLQSVVEKRNTMPELGNALLEASAEGLTLTATDLEVSMKSHCPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+I VSA  L++IVR+L   +       +E G  + ++ G + F L       FP 
Sbjct: 61  VESSGAIAVSARKLFEIVRELPQDS---LRLRSEAGERLVLTCGRARFTLVGIRADIFPP 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--------INEEDLKLC 172
             E     SF L+   L  ++ +THFAM+ +E RY LNGI  H        +  E+  + 
Sbjct: 118 FPETTQGQSFTLSGPRLAEMIAKTHFAMSQDETRYTLNGILLHLVSAADAELAGENGLVR 177

Query: 173 AVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI 232
            VATD HRLA+AE+ +   + +   +I+PRK V EI +++   D +V++ L E+ I ++ 
Sbjct: 178 IVATDTHRLAMAEMALDIPVEESAELIIPRKGVQEIRKLVEEDDEAVELGLDENFIRVSK 237

Query: 233 ESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSS 292
             + ++ +L+ G FPNYQ VIP  N   L +    L   V R+ ++S  + + ++++LSS
Sbjct: 238 PGIVLTSKLVSGRFPNYQRVIPTDNPHLLELEKEPLFGVVKRMMVLSHEKSRGIRMALSS 297

Query: 293 DKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDS 352
           D + ++  NP+   A E M   +    M + FN +YL EI+   +      D V  +L  
Sbjct: 298 DHIKVSAQNPEQEAAEEEMPCSFAGKDMTVGFNARYLQEIVSVANG-----DTVRMKLRD 352

Query: 353 SNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             S V +          + +     YVLMPMR+
Sbjct: 353 EESPVLVE---------EHSATGYLYVLMPMRV 376


>gi|70733515|ref|YP_257154.1| DNA polymerase III subunit beta [Pseudomonas fluorescens Pf-5]
 gi|68347814|gb|AAY95420.1| DNA polymerase III, beta subunit [Pseudomonas fluorescens Pf-5]
          Length = 367

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 210/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQ---KLVVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     + +L  S L+ L+ERT FAMA +++RYYLNG+   ++     + AVATDGH
Sbjct: 118 TVEEGPGSLTCQLEQSRLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGI--IRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +           +IVPRK + E+ R+L+  D +V + L +  I       + + 
Sbjct: 176 RLAMCSMQADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|24371609|ref|NP_715651.1| DNA polymerase III, beta subunit [Shewanella oneidensis MR-1]
 gi|24345359|gb|AAN53096.1|AE015452_9 DNA polymerase III, beta subunit [Shewanella oneidensis MR-1]
          Length = 366

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 213/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L   C  +ER++ +P+  ++L++ +   L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAVIH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DIV+ L + +     K  +   +  +  G S F L + P  E+P
Sbjct: 61  GDIEEGRTTVPAKKLLDIVKSLPEQS---ELKVEQQDNKWLLRSGRSRFSLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F L   VLK+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVEAFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLIETEGNM--LRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I AQ+ +   +IVPRK V E+ R+L + D  + +S+ ++ I     +   + 
Sbjct: 176 RLALSHRVIEAQLPE-KQVIVPRKGVMEMARLLETDDLDIAISIGDNAIRATTSTTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  + +QA+ R SI+S+ + + V++ L +  L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN  P++I FN  YLL++++N+ S     D+V   L   NSS  +
Sbjct: 295 NNPEQEEAEEIIDVDYNNLPLEIGFNVSYLLDVLNNLKS-----DDVRITLIDGNSSALL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                        + ++ YV+MPMR+
Sbjct: 350 E---------NHLEEDSMYVVMPMRL 366


>gi|146280399|ref|YP_001170552.1| DNA polymerase III subunit beta [Pseudomonas stutzeri A1501]
 gi|145568604|gb|ABP77710.1| DNA polymerase III, beta subunit [Pseudomonas stutzeri A1501]
 gi|327478614|gb|AEA81924.1| DNA polymerase III subunit beta [Pseudomonas stutzeri DSM 4166]
          Length = 367

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  +++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFSIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVALE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L   A IS   +++   +V I  G S F L + P ++FP
Sbjct: 61  DAAEPGEITVPARKLMDICKSLPSDALISIRLDDQ---KVVIKSGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     SF +A   L+ L+ER+ FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLSFTVAQGKLRKLIERSAFAMAQQDVRYYLNGMLIEVSSGM--LRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    +      +IVPRK + E+ R+L+ +D+ V + L +  I       + + 
Sbjct: 176 RLAMCSMQAGIEQPDRHQVIVPRKGILELARLLNDQDAEVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L S  L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKLVVGDRQLLREAFSRTAILSNEKYRGIRLQLESGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  +NSS  +
Sbjct: 296 NNPEQEEAEEEVAVDYNGGSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDANSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QEFDND---------DSAYVVMPMRL 367


>gi|104779318|ref|YP_605816.1| DNA polymerase III subunit beta [Pseudomonas entomophila L48]
 gi|95108305|emb|CAK12999.1| DNA polymerase III, beta chain [Pseudomonas entomophila L48]
          Length = 367

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 210/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L   A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPSDALIDIKVDEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     + +L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AVATDGH
Sbjct: 118 TVEEGPGSLTCQLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSPG--TLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +      A    +IVPRK + E+ R+L+  + +V + L +  I       + + 
Sbjct: 176 RLALCAMQAPIDQADRHQVIVPRKGILELARLLTDPEGTVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVDYNGSSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +    D         ++ YV+MPMR+
Sbjct: 351 QEAGND---------DSSYVVMPMRL 367


>gi|167644134|ref|YP_001681797.1| DNA polymerase III subunit beta [Caulobacter sp. K31]
 gi|167346564|gb|ABZ69299.1| DNA polymerase III, beta subunit [Caulobacter sp. K31]
          Length = 372

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 134/387 (34%), Positives = 213/387 (55%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L+ LGH   ++ER+NTIP+  ++LL A+   L   A+  ++EI     A 
Sbjct: 1   MKLTIERAALLKALGHVQSVVERRNTIPILSNILLSADRDTLSFSATDLDMEIIDEGLAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +D+ G IT  AH LY+IVRKL DG+ +S     +    + I  G S F L   P  +FP 
Sbjct: 61  IDIPGQITAPAHTLYEIVRKLPDGSDVSLSFSGDD-PRLVIQAGRSRFNLPVLPAGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
              +       + ++ L  L+++T FA++TEE RYYLNG++ H   +  ++KL AVATDG
Sbjct: 120 MSSDGLSGRISVDTNELIRLIDKTRFAISTEETRYYLNGLYLHTVNDGGEVKLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE+      A +P IIVPRK + E  R++ S    V + +S  ++       +++
Sbjct: 180 HRLALAEMAAPEGAAGLPGIIVPRKTIQEARRLMESAGEQVDLQISAQKVRFEFGRAALT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N K L ++     +AVDRV+ +S+ + ++VKL++   ++ +T
Sbjct: 240 SKVIDGAFPDYLRVIPRDNAKILTLDNDLFAKAVDRVATISAEKSRSVKLAVEPGRITLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A+E + V Y+    +I FN +YLL++   I           FR     S   
Sbjct: 300 VRNMEAGQAVEEVEVDYDGEAFEIGFNARYLLDVCGQIGGPIAE-----FRFADPASPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +                  YVLMP+R+
Sbjct: 355 VVDPTD---------PGVKYVLMPLRV 372


>gi|127510937|ref|YP_001092134.1| DNA polymerase III, beta subunit [Shewanella loihica PV-4]
 gi|126636232|gb|ABO21875.1| DNA polymerase III, beta subunit [Shewanella loihica PV-4]
          Length = 366

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAELQ 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  TV A    DIV+ L D  ++      +    + +  G S F L + P  E+P
Sbjct: 61  GEVQEGRTTVPAKKFLDIVKSLPDQVELKI---EQQDNRLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +    +    F L    LK+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVDAFQADIEFTLKQGTLKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   +   + +   +IVPRK V E+ R+   +D  V +S+ E+ I    +S   + 
Sbjct: 176 RLALSHRMVQDSLPE-KQVIVPRKGVLELQRLFEGEDLDVTLSIGENAIRATTQSAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  +L+QA+ R SI+S+ + + V++ L  + + +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLEQNLIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E +++ Y+  P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEILDIEYDNAPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         ++ YV+MPMR+
Sbjct: 350 ENHVEE---------DSMYVVMPMRL 366


>gi|119773156|ref|YP_925896.1| DNA-directed DNA polymerase [Shewanella amazonensis SB2B]
 gi|119765656|gb|ABL98226.1| DNA polymerase III, beta subunit [Shewanella amazonensis SB2B]
          Length = 366

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGEATVH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D   G  TV A  L DIV+ L +       K  +   +  +  G S F L + P  E+P
Sbjct: 61  GDVQEGRTTVPAKKLLDIVKSLPEQT---EIKVEQQENKWLLRCGRSRFSLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +       F L    LK+L++ T F+MA +++RYYLNG+          L AVATDGH
Sbjct: 118 NVEAFRPDIEFTLKQGTLKSLIDSTQFSMANQDVRYYLNGLLIETEGN--VLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I A + +   +IVPRK V E+ R+L ++D  + +++ ES I     +   + 
Sbjct: 176 RLALSHRMIEASLPE-KQVIVPRKGVVELSRLLDAEDQDITLAIGESAIRATTATAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L    L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKIVIASRNQLKQALLRASILSNEKFRGVRILLEDGLLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V YN   ++I FN  YLL++++++ S     DEV   L  SNSS  I
Sbjct: 295 NNPEQEEAEEIIDVDYNSTTLEIGFNVSYLLDVLNSLRS-----DEVRVTLIDSNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         ++ YV+MPMR+
Sbjct: 350 ENHVEE---------DSMYVVMPMRL 366


>gi|304414286|ref|ZP_07395654.1| DNA polymerase III beta subunit [Candidatus Regiella insecticola
           LSR1]
 gi|304283500|gb|EFL91896.1| DNA polymerase III beta subunit [Candidatus Regiella insecticola
           LSR1]
          Length = 375

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 130/394 (32%), Positives = 212/394 (53%), Gaps = 28/394 (7%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T++R  +L+ L      +  +  +P+  ++LLQ +D  L +  +  EIE+   I  S
Sbjct: 1   MKFTIKREHLLKPLQQVSGPLSARTALPILANLLLQVSDNTLTLTGTDLEIEMVATIALS 60

Query: 61  V---DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESE 117
                  GS TV A   +DI R L + A+I+   E +    ++I  G S F L      +
Sbjct: 61  QSHKTETGSTTVPARKFFDICRGLPEDAEITVTLETK---RLSIRSGHSRFSLSILSARD 117

Query: 118 FPSTKEEEYVYSFE--LASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVA 175
           FP+  + +     E  ++ + LK L++ T FAMA +++RYYLNG+ F +  E  KLCA+ 
Sbjct: 118 FPNLADLKKEKEVELTVSPAALKCLIDSTQFAMAHQDVRYYLNGMLFEVEGE--KLCAIT 175

Query: 176 TDGHRLAVAEVDI----VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLN 231
           TDGHRLAV    I     AQ  K  S+IVPRKAV E+ R+LS  +  + + +  + I ++
Sbjct: 176 TDGHRLAVCSTSIIQKDTAQELKKYSVIVPRKAVIELARLLSGGEDRLCLQIGSNNIRVH 235

Query: 232 IESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLS 291
           +     + +L+DG FP+Y+ V P +  K +  NC  L+QA  R +I+S+ + + V+L +S
Sbjct: 236 LNGFIFTSKLVDGRFPDYKRVFPKNPSKIVIANCEQLKQAFSRAAILSNAKFRGVRLHIS 295

Query: 292 SDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLD 351
           + KL +T +NP+  +A E+++V Y    ++I FN  YLL++++ +       D+V   L 
Sbjct: 296 AGKLKITANNPEQEEAEETLDVDYQGEDIEISFNVGYLLDVLNALKC-----DKVKLLLI 350

Query: 352 SSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            S SSV I   +              Y++MPMR+
Sbjct: 351 DSVSSVQIENIENQIT---------TYIVMPMRL 375


>gi|330806659|ref|YP_004351121.1| DNA polymerase III subunit beta [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327374767|gb|AEA66117.1| DNA polymerase III subunit beta [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 367

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 210/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GSITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPADPGSITVPARKLMDICKSLPNDALIDIKVDEQ---KLVVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++     + AVATDGH
Sbjct: 118 TVEEGPGSLTCSLDQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAG--VIRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +           +IVPRK + E+ R+L+  D +V + L +  I       + + 
Sbjct: 176 RLAMCSMQADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|197106929|ref|YP_002132306.1| DNA polymerase III, beta subunit [Phenylobacterium zucineum HLK1]
 gi|196480349|gb|ACG79877.1| DNA polymerase III, beta subunit [Phenylobacterium zucineum HLK1]
          Length = 372

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 134/387 (34%), Positives = 213/387 (55%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER+ +L  LGH    +ER+NTIP+  +VLL A    L   A+  ++EI     A 
Sbjct: 1   MKLTIERAALLRALGHVQSAVERRNTIPILSNVLLSAERDRLTFSATDLDMEIIDEAMAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           VD  G IT  AH LY+IVRKL +GA +S     E    + +  G S F L   P  +FP 
Sbjct: 61  VDQPGQITAPAHTLYEIVRKLPEGADVSLSFTGED-PRLAVQAGRSRFNLPVLPAGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
              E +     +  + L  L+++T FA++ EE RYYLNG++ H    +   +L AVATDG
Sbjct: 120 MSAEGFSGRMGVDVTDLIRLIDKTRFAISAEETRYYLNGLYLHTIVVDGSPRLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
            RLA+A++      A  P +IVPRK VGE  R+L      V++ +S  +I    +  +++
Sbjct: 180 SRLALADMPAPEGAAGAPGVIVPRKTVGEARRLLEDAGEQVELQVSPQKIRFEFDGAALT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  N++ + V+     QAVDRV+ +S+ + ++V++++ + K+ +T
Sbjct: 240 SKVIDGNFPDYARVIPKDNNRIVMVDAKLFAQAVDRVATISAEKSRSVRMAIEAGKVVLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A+E + + Y+  P ++ FN +YLL+I D IS      ++   R    N    
Sbjct: 300 VRNMEAGQAVEELEIDYDGEPFELSFNARYLLDITDQISG-----EQAELRFGGPNDPAL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +               +  Y+LMP+R+
Sbjct: 355 VLDPAD---------ADVQYILMPLRV 372


>gi|254435596|ref|ZP_05049103.1| DNA polymerase III, beta subunit [Nitrosococcus oceani AFC27]
 gi|207088707|gb|EDZ65979.1| DNA polymerase III, beta subunit [Nitrosococcus oceani AFC27]
          Length = 377

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 122/387 (31%), Positives = 202/387 (52%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ +++R +I+  L   C ++ER++T+P+  +VLL   D  L + A+  EIEI  A+   
Sbjct: 11  MRFSIKREEIVRHLVTVCGVVERRHTLPILSNVLLSVKDSQLSLMATDLEIEIRTALKVL 70

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G +TVSA    +I R L  G+     +      +  I  G S F L + P  +FPS
Sbjct: 71  SSEEGKVTVSARKFLEICRALPSGSA---LEAQYKEGQFYIHSGRSRFTLSTLPAEDFPS 127

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               + V   EL  + LK L+ RT F MA +++RYYLNG+   + EE   + AVATDGHR
Sbjct: 128 IDSIDAVAELELTQAELKQLLHRTVFCMAHQDVRYYLNGLLLELTEE--SIHAVATDGHR 185

Query: 181 LAVAEVD--IVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           LA+A +      +  ++ SII  +  +  +   L      V++    +++    + LS S
Sbjct: 186 LALASLAKGADQEGTEIQSIIPRKAILELVRL-LEESQEPVRLKFGTNQMRAEFQGLSFS 244

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG+FP+Y+ VIP   +K+   +    +QA+ RV+I+++ + + V L LS  KL   
Sbjct: 245 TKLIDGQFPDYKRVIPVGCEKQFVADRERFKQALVRVNILTNDKYRGVHLHLSDLKLQAI 304

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G A E +++ Y    ++I FN  YL+++++ I +      EV     +++SS  
Sbjct: 305 VTNLEQGSAEEELDIKYQGENLEIVFNNFYLIDVLNIIDT-----KEVRLTFTNASSSCL 359

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D           ++ YV+MPMR+
Sbjct: 360 ITPID---------ASDSKYVVMPMRL 377


>gi|77163563|ref|YP_342088.1| DNA-directed DNA polymerase [Nitrosococcus oceani ATCC 19707]
 gi|76881877|gb|ABA56558.1| DNA polymerase III, beta subunit [Nitrosococcus oceani ATCC 19707]
          Length = 367

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 122/387 (31%), Positives = 202/387 (52%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ +++R +I+  L   C ++ER++T+P+  +VLL   D  L + A+  EIEI  A+   
Sbjct: 1   MRFSIKREEIVRHLVTVCGVVERRHTLPILSNVLLSVKDSQLSLMATDLEIEIRTALKVL 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G +TVSA    +I R L  G+     +      +  I  G S F L + P  +FPS
Sbjct: 61  SSEEGKVTVSARKFLEICRALPSGSA---LEAQYKEGQFYIHSGRSRFTLSTLPAEDFPS 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               + V   EL  + LK L+ RT F MA +++RYYLNG+   + EE   + AVATDGHR
Sbjct: 118 IDSIDAVAELELTQAELKQLLHRTVFCMAHQDVRYYLNGLLLELTEE--SIHAVATDGHR 175

Query: 181 LAVAEVD--IVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           LA+A +      +  ++ SII  +  +  +   L      V++    +++    + LS S
Sbjct: 176 LALASLAKGADQEGTEIQSIIPRKAILELVRL-LEESQEPVRLKFGTNQMRAEFQGLSFS 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG+FP+Y+ VIP   +K+   +    +QA+ RV+I+++ + + V L LS  KL   
Sbjct: 235 TKLIDGQFPDYKRVIPVGCEKQFVADRERFKQALVRVNILTNDKYRGVHLHLSDLKLQAI 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G A E +++ Y    ++I FN  YL+++++ I +      EV     +++SS  
Sbjct: 295 VTNLEQGSAEEELDIKYQGENLEIVFNNFYLIDVLNIIDT-----KEVRLTFTNASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D           ++ YV+MPMR+
Sbjct: 350 ITPID---------ASDSKYVVMPMRL 367


>gi|91791371|ref|YP_561022.1| DNA polymerase III, beta subunit [Shewanella denitrificans OS217]
 gi|91713373|gb|ABE53299.1| DNA polymerase III, beta subunit [Shewanella denitrificans OS217]
          Length = 366

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +  ++ +  +  E+E+ G     
Sbjct: 1   MKFSIDRDALLKPLQLVTGAVERRHNLPILANLLVKVSQDVISLTGTDLEVELVGQAAIH 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            D V G+ TV A  L DIV+ L + +++      +      +  G S F L + P S++P
Sbjct: 61  GDIVPGNTTVPAKKLLDIVKSLPEQSELHV---EQQDNRWLLRSGRSRFTLATLPASDYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F +   VLK++++ T F+MA +++RYYLNG+ F        L A+ATDGH
Sbjct: 118 NVEAFQAEIEFTIKQGVLKSIIDSTQFSMANQDVRYYLNGLLFETEGN--TLKAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I   + +   I+  +  V      L S D  + +++ ES I    ++   + 
Sbjct: 176 RLALSHRQIDVSLPEKQVIVPRKGVVEMSRL-LDSDDKDISIAIGESAIRAVTDTAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +   L+QA+ R SI+S+ + + V++ L    L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKVVVASRQQLKQALTRASILSNEKFRGVRIQLEPGLLRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   ++I FN  YLL++++N++S     ++V   L   NSS  I
Sbjct: 295 NNPEQEEAEEIIDVDYDSANLEIGFNVSYLLDVLNNLAS-----EDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         ++ YV+MPMR+
Sbjct: 350 ENHKEE---------DSMYVVMPMRL 366


>gi|170719189|ref|YP_001746877.1| DNA polymerase III subunit beta [Pseudomonas putida W619]
 gi|169757192|gb|ACA70508.1| DNA polymerase III, beta subunit [Pseudomonas putida W619]
          Length = 367

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 210/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L +   I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDVLIDIKVDEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++     L AV+TDGH
Sbjct: 118 TVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRN--TLRAVSTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +    +  +   +IVPRK + E+ R+L+  +  V + L +  I  N    + + 
Sbjct: 176 RLALCSMSAAIEQDERHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRANTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L++ +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEISVDYDGASLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALL 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +    D         ++ YV+MPMR+
Sbjct: 351 QEAGND---------DSSYVVMPMRL 367


>gi|301154704|emb|CBW14167.1| DNA polymerase III, beta subunit [Haemophilus parainfluenzae T3T1]
          Length = 366

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSYTQLS 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D  +I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSTADGAFTIPAKKFLDICRTLSDEFEITVTFEED---RAIVESGRSKFNLTTLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFALPQSTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +++   + +  S+I+PRK V E+ R+L S D   ++ +  + + +++  +  + 
Sbjct: 176 RLAVCTIELDQDL-QTHSVILPRKGVLELNRLLESSDELARLQIGTNNLRIHLNHIVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + +  N   L+QA  R SI+S+ R+++V+L+LS ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATRIVEGNWETLKQAFVRASILSNERVRSVRLNLSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y    M++ FN  Y+L++++ +        +V  RL  ++SS  I
Sbjct: 295 SNPEHEVAEEIVDVNYQGEEMEVGFNVTYILDVLNALKCQ-----QVRIRLTDASSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENSEDASAE---------YVIMPMRL 366


>gi|170724372|ref|YP_001758398.1| DNA polymerase III subunit beta [Shewanella woodyi ATCC 51908]
 gi|169809719|gb|ACA84303.1| DNA polymerase III, beta subunit [Shewanella woodyi ATCC 51908]
          Length = 366

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK +++R  +L+ L      +ER++ +P+  ++L++ +   L++  +  E+E+ G +   
Sbjct: 1   MKFSIDRDALLKPLQLVTGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQVQLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  T+ A    DIV+ L D  ++   ++      + +  G S F L + P  E+P
Sbjct: 61  GEVQEGRTTIPAKKFLDIVKSLPDQVELKIEQQEN---RLLLRSGRSRFTLATLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +  +    F +    LK+L++ T F+MA +++RYYLNG+          L A+ATDGH
Sbjct: 118 NVEAFQAEIEFTINQGTLKSLIDATQFSMANQDVRYYLNGLLLETEGN--VLRAIATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA++   I   + +   +IVPRK V E+ R+   ++  + +++ ++ I     S   + 
Sbjct: 176 RLALSHRQIQDTLPE-KQVIVPRKGVVELQRLFEGEELDITIAIGDNAIRATTASAVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  +  +L+QA+ R SI+S+ + + V++ L  + + +T 
Sbjct: 235 KLVDGRFPDYRRVLPKGGDKVVIASRNHLKQALLRASILSNEKFRGVRVQLEENLIKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y   P++I FN  YLL++++N+ S     D+V   L   NSS  I
Sbjct: 295 NNPEQEEAEEILDVEYENTPLEIGFNVSYLLDVLNNLPS-----DDVRITLIDGNSSALI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
               ++         ++ YV+MPMR+
Sbjct: 350 ENHIEE---------DSMYVVMPMRL 366


>gi|269103821|ref|ZP_06156518.1| DNA polymerase III beta subunit [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163719|gb|EEZ42215.1| DNA polymerase III beta subunit [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 365

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 215/386 (55%), Gaps = 22/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ R  +L+ L      +  + ++P+  ++LLQ  +GLL +  +  E+E+   I   
Sbjct: 1   MKFTLAREQLLKPLQQVSGAL-GRPSLPILGNILLQVEEGLLSLTGTDLEVELVAKIVLE 59

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G+ITV +    DI R L D A IS   E   G    I  G S + L + P S+FP
Sbjct: 60  GEFEAGAITVPSRKFLDICRGLPDSATISVSVE---GDRALIRSGRSRYSLATLPASDFP 116

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  S L+ L++ T F+MA +++RYYLNG+ F    +   L  VATDGH
Sbjct: 117 NIDDWQSEVEFELEQSRLRQLIDSTQFSMAHQDVRYYLNGMLFE--TDGKLLRTVATDGH 174

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AV  +D    +     II+PRK V E++R+L + ++ V++ +  S +   + +   + 
Sbjct: 175 RMAVCAIDTAYDVP-SKQIILPRKGVLELVRLLDNPEAPVQIQIGGSNLRATVNNFVFTS 233

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +++K +  +C  LR+A  R +I+S+ + + V+++L++ ++ +T 
Sbjct: 234 KLVDGRFPDYRRVLPQNSNKFVTASCDELRKAFSRAAILSNEKFRGVRVNLAAGEMRITA 293

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y   P++I FN  Y+L++++ +       ++V   L  +N+S  +
Sbjct: 294 NNPEQEEAEEFLDVDYQGEPIEIGFNVSYVLDVLNTLKC-----EQVKMSLTDANASALL 348

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                D         +A YV+MP+R+
Sbjct: 349 EDNAVD---------DAMYVVMPIRL 365


>gi|254428026|ref|ZP_05041733.1| DNA polymerase III, beta subunit [Alcanivorax sp. DG881]
 gi|196194195|gb|EDX89154.1| DNA polymerase III, beta subunit [Alcanivorax sp. DG881]
          Length = 366

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 217/386 (56%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R  +L+ L     ++E++ T+PV  +VLL+  DG L +  +  E+E+   +P  
Sbjct: 1   MKFSINREQLLKPLQQVAAVVEKRQTLPVLSNVLLEVGDGQLSMTGTDLELELVARLPLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  TV A  L DI + L   A I F  + E    + +  G S F L + P SEFP
Sbjct: 61  GEQEPGETTVPARKLVDIAKSLPAEADIRFEVDGE---RMLVRSGRSRFTLSTLPASEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E+      E+   VL+ L++RT F+MA +++RYYLNG+ F +     +L AVATDGH
Sbjct: 118 NLEEDAAGSRLEMKPDVLRGLIDRTAFSMAQQDVRYYLNGMLFELKPG--RLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+ + ++ A + +  S+I+PRK V E+ RIL     + ++++  + + + + +++ + 
Sbjct: 176 RLALCDAELDAPVEE-ASVILPRKGVMELSRILGDSGEAARLTIGRNHVRIVVGAITFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP Y  VIP    +++  +   LRQA+ RV+I+S+ + + V++ LS   L +  
Sbjct: 235 KLVDGKFPEYDRVIPKEGSRKVVADRETLRQALARVAILSNEKYRGVRVQLSEGSLRIVA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +N  P++I FN  YLL++++ +        +    +  SNSS  +
Sbjct: 295 NNPEQEEAEEEVSVDFNGSPLEIGFNVSYLLDVLNTMGGT-----QAELEMGDSNSSALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  +         A YV+MPMR+
Sbjct: 350 FDPESKA---------AVYVVMPMRL 366


>gi|197286951|ref|YP_002152823.1| DNA polymerase III subunit beta [Proteus mirabilis HI4320]
 gi|227354808|ref|ZP_03839225.1| DNA polymerase III beta subunit [Proteus mirabilis ATCC 29906]
 gi|118801|sp|P22838|DPO3B_PROMI RecName: Full=DNA polymerase III subunit beta
 gi|150879|gb|AAA83959.1| DNA polymerase III beta subunit [Proteus mirabilis]
 gi|194684438|emb|CAR46154.1| DNA polymerase III beta subunit [Proteus mirabilis HI4320]
 gi|227165126|gb|EEI49957.1| DNA polymerase III beta subunit [Proteus mirabilis ATCC 29906]
          Length = 367

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 112/386 (29%), Positives = 202/386 (52%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  +ER  +L+ L      +  + T+P+  ++LL+  +  L +  +  E+E+   +  S
Sbjct: 1   MKFIIEREQLLKPLQQVSGPLGGRPTLPILGNLLLKVTENTLSLTGTDLEMEMMARVSLS 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+IS   +   G  + +  G S F L + P S+FP
Sbjct: 61  QSHEIGATTVPARKFFDIWRGLPEGAEISVELD---GDRLLVRSGRSRFSLSTLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + LK L+E T F+MA +++RYYLNG+ F    E+ +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFE--TENTELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +DI   +     I+  +  +  +  +  S +S +++ +  + +  ++     + 
Sbjct: 176 RLAVCAMDIGQSLPGHSVIVPRKGVIELMRLLDGSGESLLQLQIGSNNLRAHVGDFIFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P +  K +   C  L+QA  R +I+S+ + + V+++L++ +L +T 
Sbjct: 236 KLVDGRFPDYRRVLPKNPTKTVIAGCDILKQAFSRAAILSNEKFRGVRINLTNGQLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y    M+I FN  YLL++++ +       +EV   L  + SSV +
Sbjct: 296 NNPEQEEAEEIVDVQYQGEEMEIGFNVSYLLDVLNTLKC-----EEVKLLLTDAVSSVQV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +              MPMR+
Sbjct: 351 ENVASAAAAYVV---------MPMRL 367


>gi|254465740|ref|ZP_05079151.1| DNA polymerase III, beta subunit [Rhodobacterales bacterium Y4I]
 gi|206686648|gb|EDZ47130.1| DNA polymerase III, beta subunit [Rhodobacterales bacterium Y4I]
          Length = 373

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 148/388 (38%), Positives = 232/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A    ++ +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDSVQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTADAATG-RLAVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE---EDLKLCAVATD 177
               EY  +F   ++VL+ L +++ FA++TEE RYYLNG++ H+         L AVATD
Sbjct: 120 MASSEYHSNFAAKAAVLRRLFDKSKFAISTEETRYYLNGVYLHVANGAEGGKALRAVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + ++      MP +IVPRK VGE+ ++L   D  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDAELPLGAEDMPGVIVPRKTVGELRKLLDEDDMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+     QAVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPAGNTRRLEVDAAEFAQAVDRVATVSSERSRAVKLQLEEDRLIL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V YN+  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYNDERLEIGFNAKYLLEIANQVD-----RENAVFMFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R  + +S         A YV+MPMR+
Sbjct: 355 LMREGNDES---------AVYVVMPMRV 373


>gi|315497053|ref|YP_004085857.1| DNA polymerase iii, beta subunit [Asticcacaulis excentricus CB 48]
 gi|315415065|gb|ADU11706.1| DNA polymerase III, beta subunit [Asticcacaulis excentricus CB 48]
          Length = 373

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 133/387 (34%), Positives = 219/387 (56%), Gaps = 16/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++ +ER  +L+ LGH   ++ER+NTIP+  +VLL A    +   A+  ++EI  +  A 
Sbjct: 1   MQLIIERGALLKALGHVQNVVERRNTIPILSNVLLSAEGSQVSFSATDLDMEIVDSAEAI 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V V G IT  AH LY+IVRKL DGA +    +      + +  G S F L   P  +FP 
Sbjct: 61  VAVPGQITAPAHTLYEIVRKLPDGADVELRYQAGDDPRLTVQAGRSRFALPVLPAGDFPV 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
              +    ++ L    LK L+++T FA++TEE RYYLNG+F H    +    L AVATDG
Sbjct: 121 MSGDHDGTTYALLKEDLKRLIDKTRFAVSTEETRYYLNGLFLHTLTEDGSGYLRAVATDG 180

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE+           +I+PRK + +  R+L      V++++S ++I  N  + +++
Sbjct: 181 HRLALAEMPAPDGSMGSAGVIIPRKTIDQARRLLDDGTGYVELTVSPAKIRFNFGTAALT 240

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP +NDK +R++   L +AVDRVS +S+ + ++VK+++   +L +T
Sbjct: 241 SKIIDGSFPDYGRVIPKNNDKLMRIDTGILSRAVDRVSTISAEKSRSVKMAIEPGRLTLT 300

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A+E   + Y+   ++I FN +Y+L+++  I+      ++V  RL+ + S   
Sbjct: 301 VRNIEAGQAVEEAEIDYDSDSLEIGFNARYILDVMGQIAG-----EQVELRLNDAASPTL 355

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +                  YVLMP+R+
Sbjct: 356 VLDTADQGVQ---------YVLMPLRV 373


>gi|15595200|ref|NP_064722.1| DNA polymerase III subunit beta [Pseudomonas aeruginosa PAO1]
 gi|107098996|ref|ZP_01362914.1| hypothetical protein PaerPA_01000002 [Pseudomonas aeruginosa PACS2]
 gi|116053722|ref|YP_788157.1| DNA polymerase III subunit beta [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218888748|ref|YP_002437612.1| DNA polymerase III subunit beta [Pseudomonas aeruginosa LESB58]
 gi|254237755|ref|ZP_04931078.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa C3719]
 gi|254243116|ref|ZP_04936438.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa 2192]
 gi|296386474|ref|ZP_06875973.1| DNA polymerase III subunit beta [Pseudomonas aeruginosa PAb1]
 gi|313111476|ref|ZP_07797277.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa 39016]
 gi|13959347|sp|Q9I7C4|DPO3B_PSEAE RecName: Full=DNA polymerase III subunit beta
 gi|9945820|gb|AAG03392.1|AE004440_2 DNA polymerase III, beta chain [Pseudomonas aeruginosa PAO1]
 gi|115588943|gb|ABJ14958.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169686|gb|EAZ55197.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa C3719]
 gi|126196494|gb|EAZ60557.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa 2192]
 gi|218768971|emb|CAW24729.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa LESB58]
 gi|310883779|gb|EFQ42373.1| DNA polymerase III, beta chain [Pseudomonas aeruginosa 39016]
          Length = 367

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 209/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L +   I    E +   ++ +  G S F L + P ++FP
Sbjct: 61  DAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F +A S L+ L++RT FAMA +++RYYLNG+   +N     L +VATDGH
Sbjct: 118 TVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGG--TLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +D          +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L LS+  L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  I +     ++V F L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGT-----EQVRFILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D D         ++ YV+MPMR+
Sbjct: 351 HEADND---------DSAYVVMPMRL 367


>gi|329891033|ref|ZP_08269376.1| DNA polymerase III, beta subunit [Brevundimonas diminuta ATCC
           11568]
 gi|328846334|gb|EGF95898.1| DNA polymerase III, beta subunit [Brevundimonas diminuta ATCC
           11568]
          Length = 372

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 138/387 (35%), Positives = 214/387 (55%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ERS +L  LGH   ++ER+NTIP+  +VLL A    L   A+  ++E+     A 
Sbjct: 1   MQLTIERSALLRALGHVQSVVERRNTIPILSNVLLSAGRDRLSFAATDLDMEMVDEAEAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+V G IT  AH LY+IVRKL DGA++S     +    + ++ G S F L   P  +FP 
Sbjct: 61  VNVEGQITAPAHTLYEIVRKLPDGAEVSLTYSGDD-PRLVVAAGRSRFNLPVLPAGDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
              E     + L    L  L+++T FA++TEE RYYLNG++ H   +     L AVATDG
Sbjct: 120 MSTEASGARYTLPKEDLARLIDKTRFAVSTEETRYYLNGLYLHTVADGGIPLLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA+AE       A  P +IVPRK V ++ R+L      V+V +S  +I       S++
Sbjct: 180 HRLALAETPAPEGAAGGPGVIVPRKTVDQVRRLLDDGAGPVEVQVSAQKIRFEFGEASLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG FP+Y  VIP  NDK+  ++ +   +AVDRV+ +S+ + ++VKL+  +D++ +T
Sbjct: 240 SKVIDGAFPDYLRVIPKGNDKQADIDNSLFAKAVDRVATISAEKSRSVKLAFDNDRVKLT 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V N + G+A E + + Y++ P +I FN +YLL++   I+      +   F+     S   
Sbjct: 300 VRNMEAGQAEEEVEIGYSDEPFEIGFNARYLLDVAGQITG-----ETAHFKFADPASPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +                  YVLMP+R+
Sbjct: 355 VLDPADVGVQ---------YVLMPLRV 372


>gi|325577774|ref|ZP_08148049.1| DNA-directed DNA polymerase III beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325160519|gb|EGC72645.1| DNA-directed DNA polymerase III beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 367

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 2   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSYTQLS 61

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D  +I+   E +      +  G S F L + P  E+P
Sbjct: 62  SSTADGAFTIPAKKFLDICRTLSDEFEITVTFEED---RAIVESGRSKFNLTTLPAEEYP 118

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 119 NLTDWQSEVDFALPQSTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 176

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  +++   + +  S+I+PRK V E+ R+L S D   ++ +  + + +++  +  + 
Sbjct: 177 RLAVCTIELDQDL-QTHSVILPRKGVLELNRLLESSDELARLQIGTNNLRIHLNHIVFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + +  N   L+QA  R SI+S+ R+++V+L+LS ++L +T 
Sbjct: 236 KLIDGRFPDYRRVLPRNATRIVEGNWETLKQAFVRASILSNERVRSVRLNLSENQLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y    M++ FN  Y+L++++ +        +V  RL  ++SS  I
Sbjct: 296 SNPEHEVAEEIVDVNYQGEEMEVGFNVTYILDVLNALKCQ-----QVRIRLTDASSSCLI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 351 ENSEDASAE---------YVIMPMRL 367


>gi|114326983|ref|YP_744140.1| DNA polymerase III subunit beta [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315157|gb|ABI61217.1| DNA polymerase III, beta chain [Granulibacter bethesdensis CGDNIH1]
          Length = 387

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 146/391 (37%), Positives = 214/391 (54%), Gaps = 22/391 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK   ER+ +L+ L H   ++E++NTIP+  +VLL+  DG L   A+  EI I   +PA 
Sbjct: 13  MKFKAERAVLLKALAHVQSVVEKRNTIPILANVLLEVKDGSLRFTATDMEIAIVEDVPAE 72

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G++T  A  LY+IVRKL DGA +    +     ++ +  G     L   P  +FPS
Sbjct: 73  GLRDGAVTAPAGTLYEIVRKLPDGADVELDHQAGD-QQLMLKSGRYATKLVVLPTDDFPS 131

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN---EEDLKLCAVATD 177
                  + F LA +VL+ L++RT FA++TEE RYYLNGI+FH      +   L AVATD
Sbjct: 132 MTTGALPHQFRLAGNVLRGLIDRTRFAISTEETRYYLNGIYFHAAQGGPDGAALRAVATD 191

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  E  +      MP +IVPRK V E+ ++L     +V V+LS++RI      +++
Sbjct: 192 GHRLARVEEPLPEGALGMPGVIVPRKTVAELRKLLDEVTDTVDVALSDTRIQFVAGPVTL 251

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP Y+ VIP  NDK LRV   +   AV RV+ +SS R + VK++L  + L +
Sbjct: 252 TSKLIDGTFPEYERVIPKDNDKVLRVGKNDFSAAVARVAAISSERSRPVKMALDRNLLVL 311

Query: 298 TVDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           +  +PD G A E ++   + Y    ++I F  +YL +I D I       +EV FR    +
Sbjct: 312 SASSPDQGTATEELDGDRIQYEAGALEIGFQARYLNDITDQI------AEEVEFRFADGS 365

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +   ++     S         A YVLMPMR+
Sbjct: 366 APTVVQDAADSS---------ALYVLMPMRV 387


>gi|99079843|ref|YP_611997.1| DNA polymerase III subunit beta [Ruegeria sp. TM1040]
 gi|99036123|gb|ABF62735.1| DNA polymerase III, beta subunit [Ruegeria sp. TM1040]
          Length = 373

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 145/388 (37%), Positives = 231/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERATLLKAVAQAQSVVERRNTIPILANVLIEAEGSDVMFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLDADAASG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI---NEEDLKLCAVATD 177
               EY  +F   +++L+ L +++ FA++TEE RYYLNG++ H+         L  VATD
Sbjct: 120 MATSEYHSNFTANAAMLRRLFDKSKFAISTEETRYYLNGVYMHVATGESGGKALRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + D+      MP +IVPRK VGE+ ++L   D  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDADLPMGAEDMPGVIVPRKTVGELRKLLDEDDMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPVGNTRRLEVDASEFAKAVDRVATVSSERSRAVKLQLDEDRLVL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y++  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYSDERLEIGFNAKYLLEIANQVD-----RENAVFMFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R    +S         A YV+MPMR+
Sbjct: 355 LMREGSDES---------AVYVVMPMRV 373


>gi|296445221|ref|ZP_06887181.1| DNA polymerase III, beta subunit [Methylosinus trichosporium OB3b]
 gi|296257395|gb|EFH04462.1| DNA polymerase III, beta subunit [Methylosinus trichosporium OB3b]
          Length = 371

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 177/387 (45%), Positives = 240/387 (62%), Gaps = 18/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKIT+ER+ +L  LGH  R++ER+ TIP+  +VLL A DGLL  KA+  ++EIT    A 
Sbjct: 1   MKITIERAALLRALGHVHRVVERRTTIPILANVLLDAADGLLL-KATDLDLEITEKAAAE 59

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G+ T+ AH LYDIVRKL DGAQ+S     E G  + +  G S F LQS PES+FP 
Sbjct: 60  IGQKGATTLPAHTLYDIVRKLPDGAQVSLEGTGEQGLFL-LRSGRSRFQLQSLPESDFPD 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE--EDLKLCAVATDG 178
               E+ + F+LA + LK L+ +T FA+++EE RYYLNGIF H  E      L AVATDG
Sbjct: 119 VTSGEFSHRFQLAPADLKKLILKTQFAISSEETRYYLNGIFLHSTEVEGHQLLRAVATDG 178

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E+   A  A MP +I+PRKAV E+LR++     +V++ LS +++  +     ++
Sbjct: 179 HRLARVELPAPAGAAGMPGVILPRKAVNEVLRLVEDAQGAVEIELSTNKMRFSFGETVLT 238

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK L V   + R+AVDRVS +SS R +AVKL+LS  KL ++
Sbjct: 239 TKLIDGTFPDYGRVIPAGNDKRLTVERASFREAVDRVSTISSERGRAVKLALSEGKLVLS 298

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A+E +   Y+  P+DI FN +YLL+I D + S     D  +FRL    S   
Sbjct: 299 VTNPDQGSAVEEIEADYDGPPIDIGFNSRYLLDIADQLDS-----DTALFRLADPGSPTL 353

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D           +A YVLMPMR+
Sbjct: 354 IQDRD---------GASALYVLMPMRV 371


>gi|152987905|ref|YP_001345398.1| DNA polymerase III subunit beta [Pseudomonas aeruginosa PA7]
 gi|150963063|gb|ABR85088.1| DNA polymerase III, beta subunit [Pseudomonas aeruginosa PA7]
          Length = 367

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L     I    E +   ++ +  G S F L + P ++FP
Sbjct: 61  DAAEPGEITVPARKLMDICKSLPSDVLIDIRVEEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F +A S L+ L++RT FAMA +++RYYLNG+   +N     L +VATDGH
Sbjct: 118 TVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGG--ALRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +D          +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L LS+  L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKLVIGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  I +     ++V F L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGT-----EQVRFILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D D         ++ YV+MPMR+
Sbjct: 351 HEADND---------DSAYVVMPMRL 367


>gi|113460283|ref|YP_718342.1| DNA polymerase III subunit beta [Haemophilus somnus 129PT]
 gi|170718298|ref|YP_001783357.1| DNA polymerase III subunit beta [Haemophilus somnus 2336]
 gi|112822326|gb|ABI24415.1| DNA polymerase III, beta subunit [Haemophilus somnus 129PT]
 gi|168826427|gb|ACA31798.1| DNA polymerase III, beta subunit [Haemophilus somnus 2336]
          Length = 366

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 202/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           M+  V R  +L+ L   C ++  +   P+  +VLLQ    +L I  +  E+E++      
Sbjct: 1   MQFIVSREHLLKPLQQVCGVLSSRPNFPILNNVLLQIEGNVLRITGTDLEVELSTQAQLI 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GS T+ A    DI R   D A+I+   E E      +  G S F L + P  E+P
Sbjct: 61  QASQDGSYTIPAKKFLDICRSFPDEAEITVIFEEE---RALVRSGRSKFNLTALPADEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLADWQSEVDFYLPQSTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +    ++I+PRK + E++R+L + + +  V +  + + +++ S+  + 
Sbjct: 176 RLAVCTIPLEQDL-HTHAVILPRKGILELMRLLENSEHAAHVQIGTNNLRIDLGSIIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +    +  N   L+QA  R++I+SS +++ V+L L+S++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATHIMEGNWELLKQAFARMAILSSDKVKTVRLQLTSNQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V YN   M++ FN  Y+L++++ +        +V      ++SS  +
Sbjct: 295 TNPEQEVAEEILDVIYNGADMEVGFNVSYILDVLNALKCQ-----QVRLCFTDASSSCLL 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D +S           YV+MPMR+
Sbjct: 350 EDADDESAE---------YVVMPMRL 366


>gi|77456230|ref|YP_345735.1| DNA polymerase III subunit beta [Pseudomonas fluorescens Pf0-1]
 gi|77380233|gb|ABA71746.1| DNA polymerase III, beta chain [Pseudomonas fluorescens Pf0-1]
          Length = 367

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER+ T+PV  +VLL  +   L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVDGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                GSITV A  L DI + L + A I    + +   ++ +  G S F L + P ++FP
Sbjct: 61  EPAETGSITVPARKLMDICKSLPNDALIDIKVDEQ---KLVVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +  L  S L+ L+ERT FAMA +++RYYLNG+   ++     + AVATDGH
Sbjct: 118 TVEEGPGSLTTSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSTG--VIRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +           +IVPRK + E+ R+L+  D +V + L +  I       + + 
Sbjct: 176 RLAMCSMQADIGQQDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L L+S +L +  
Sbjct: 236 KLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  +++     ++V   L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTT-----EQVRLILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D D         ++ YV+MPMR+
Sbjct: 351 QESDND---------DSAYVVMPMRL 367


>gi|68249577|ref|YP_248689.1| DNA polymerase III subunit beta [Haemophilus influenzae 86-028NP]
 gi|68057776|gb|AAX88029.1| DNA polymerase III, beta chain [Haemophilus influenzae 86-028NP]
          Length = 366

 Score =  266 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKTVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|254510311|ref|ZP_05122378.1| DNA polymerase III, beta subunit [Rhodobacteraceae bacterium KLH11]
 gi|221534022|gb|EEE37010.1| DNA polymerase III, beta subunit [Rhodobacteraceae bacterium KLH11]
          Length = 373

 Score =  266 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 146/388 (37%), Positives = 234/388 (60%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A       +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVSQAQSVVERRNTIPILANVLIEAEGDQALFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   ++  G  + +  G SNF L + P+ +FP 
Sbjct: 61  VEKAGATTVAATTLHEIVRKLPDGALVTLTADSAAG-RLTVEAGRSNFSLATLPKEDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI---NEEDLKLCAVATD 177
               EY  +F  ++++L+ L +++ FA++TEE RYYLNG++ H+   ++    L  VATD
Sbjct: 120 MASSEYQSNFTASAALLRRLFDKSKFAISTEETRYYLNGVYMHVADGSDGGKVLRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + D+    A +P +IVPRK VGE+ ++L   +  + VS+SE++I      +++
Sbjct: 180 GHRLARIDADLPDGAADLPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKIRFATPDITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N ++L V+     QAVDRV+ +SS R +AVKL L +DKL +
Sbjct: 240 TSKVIDGTFPDYTRVIPQGNTRKLEVDAAEFAQAVDRVATVSSERSRAVKLQLDADKLVL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +S+    
Sbjct: 300 SVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFMFNSAGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R         + N  +A YV+MPMR+
Sbjct: 355 LMR---------EGNDQSAVYVVMPMRV 373


>gi|220933195|ref|YP_002512094.1| DNA polymerase III, beta subunit [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994505|gb|ACL71107.1| DNA polymerase III, beta subunit [Thioalkalivibrio sp. HL-EbGR7]
          Length = 366

 Score =  266 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 199/385 (51%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ +++R D+L+ L      +ER+ T+P+  +VL++A++  L +  +  E+E+       
Sbjct: 1   MRFSIQREDLLKPLQQVIGAVERRQTMPILANVLIKADEDRLSVTGTDLEVELVAEASEV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G  TV A  L DI R L D A +    E   G  V I+ G + F L + P ++FP+
Sbjct: 61  SASPGEATVPARKLLDICRALPDEASLEIQAE---GDRVLITSGRARFTLSALPAADFPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E        L    L++L+ RT FAMA +++RYYLNG+          +  VATDGHR
Sbjct: 118 LDEISSSKELTLTERELRHLILRTSFAMANQDVRYYLNGLMLE--VGQNVIRTVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ E++     A    +I+PRK V E+LR+L   D  V++ +  + I   +  L  + +
Sbjct: 176 LALCELNTTVDTASSQQVIIPRKGVQELLRLLEDSDEPVRLQIGANHIRATLPRLRFTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+Y  VIP   D+ ++V    LR+A+ R SI+S+ + + ++L L    L +   
Sbjct: 236 LIDGRFPDYDRVIPKDGDQVMKVEREALRKALARASILSNEKYRGIRLVLGDGLLRIQAH 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A + +   Y    M+I FN  YLL++++ +  D +           +NSSV +R
Sbjct: 296 NPEQEEAEDEIEAQYTGTAMEIGFNVTYLLDVLNTVEGDVIEA-----TFKDANSSVLMR 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                         +A YV+MPMR+
Sbjct: 351 DP---------GATDALYVVMPMRL 366


>gi|171913560|ref|ZP_02929030.1| DNA polymerase III subunit beta [Verrucomicrobium spinosum DSM
           4136]
          Length = 365

 Score =  266 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 114/385 (29%), Positives = 189/385 (49%), Gaps = 22/385 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ +   L  L     ++  + T+P+  +VL++A +G L+   +  ++ I+G + A 
Sbjct: 1   MKFSISKEAFLTALQQVQHVVSTRTTLPILSNVLIKAGNGQLQFVTTDLDVGISGTVAAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ T+ A  L  I+R+L          E  +     I  G S F +      EFP 
Sbjct: 61  VEEAGATTLPARKLVSIIRELPSDEVEVTVDERNVAH---IRSGPSFFKVMGLAADEFPP 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
                    F+L   VLK+ + +T +A++T+E RY LNGI     E    L  VATDG R
Sbjct: 118 LPTFSDAREFKLEQRVLKDCLRKTSYAISTDETRYVLNGILCSFKENM--LTMVATDGRR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ E ++    +    II+P KAV EI R+L   +  V + +   +I  ++    ++ +
Sbjct: 176 LAMVEQELEFPQSNEVDIIIPTKAVNEIQRLLE-DEGEVTLKVGSGQIAFDLGDFFLASK 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LI+G +PNY+ VIP    + + ++   L + + R S++ S +  +VKL L+ D L +  +
Sbjct: 235 LIEGNYPNYRQVIPGEARERIALDREPLLRTLGRTSLLLSDKSNSVKLHLTKDNLEVVAN 294

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
            PD+G+A ES+ + Y    M I FN ++ +  + N+     V DEV   L    S   +R
Sbjct: 295 APDVGEARESVAINYKGAEMTIAFNPEFFMAPLRNL-----VSDEVYLHLIDEISPGVLR 349

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                         N  YVLMPMR+
Sbjct: 350 S-----------GTNFLYVLMPMRV 363


>gi|110832863|ref|YP_691722.1| DNA polymerase III subunit beta [Alcanivorax borkumensis SK2]
 gi|110645974|emb|CAL15450.1| DNA polymerase III, beta subunit [Alcanivorax borkumensis SK2]
          Length = 366

 Score =  266 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 216/386 (55%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R  +L+ L     ++E++ T+PV  +VLL+  DG L +  +  E+E+   +P  
Sbjct: 1   MKFSINREQLLKPLQQVAAVVEKRQTLPVLSNVLLEVGDGQLSMTGTDLELELVARLPLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  TV A  L DI + L   A I F  + E    + +  G S F L + P SEFP
Sbjct: 61  GELEPGETTVPARKLVDIGKSLPAEADIRFEVDGE---RMLVRSGRSRFTLSTLPASEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E+    S E+   VL+ L++RT F+MA +++RYYLNG+ F +     +L AVATDGH
Sbjct: 118 NLEEDAAGSSLEIKPDVLRGLIDRTAFSMAQQDVRYYLNGMLFELKSG--RLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+ + ++   + +  S+I+PRK V E+ RIL       ++++  + + + + +++ + 
Sbjct: 176 RLALCDAELDVPVEE-ASVILPRKGVMELSRILGDSGEVARLTIGRNHVRIVVGAITFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP Y  VIP    +++  +   LRQA+ RV+I+S+ + + V++ LS   L +  
Sbjct: 235 KLVDGKFPEYDRVIPKEGSRKVVADRETLRQALARVAILSNEKYRGVRVQLSEGSLRIVA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V +N  P++I FN  YLL++++ +        +    +  SNSS  +
Sbjct: 295 NNPEQEEAEEEVSVDFNGSPLEIGFNVSYLLDVLNTMGGT-----QAELEMGDSNSSALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  +         A YV+MPMR+
Sbjct: 350 FDPESKA---------AVYVVMPMRL 366


>gi|254474541|ref|ZP_05087927.1| DNA polymerase III, beta subunit [Ruegeria sp. R11]
 gi|214028784|gb|EEB69619.1| DNA polymerase III, beta subunit [Ruegeria sp. R11]
          Length = 373

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 143/388 (36%), Positives = 231/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A     + +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDTAQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTADAASG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE---EDLKLCAVATD 177
               EY  +F   +++L+ L +++ FA++TEE RYYLNG++ H+ +       L  VATD
Sbjct: 120 MASSEYHSNFTANAAILRRLFDKSKFAISTEETRYYLNGVYMHVADAVEGGKALRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + ++      MP +IVPRK VGE+ ++L   +  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDANLPMGAEDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPAGNTRRLEVDAAEFARAVDRVATVSSERSRAVKLQLDDDRLIL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y++  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYSDERLEIGFNAKYLLEIANQVD-----RENAVFLFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R  + +S         A YV+MPMR+
Sbjct: 355 LMREGNDES---------AVYVVMPMRV 373


>gi|226225408|ref|YP_002759514.1| DNA polymerase III beta subunit [Gemmatimonas aurantiaca T-27]
 gi|226088599|dbj|BAH37044.1| DNA polymerase III beta subunit [Gemmatimonas aurantiaca T-27]
          Length = 370

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 17/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ R  + E L      +  K T+PV  ++L++  D  +   A+  +I ++  + A 
Sbjct: 1   MKFTISREKLQEGLQAVTAAVPAKTTLPVLANLLVETTDRGIRFSATDLDIAVSTEVSAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+IT+ A  L +I R+L                 V +  G S F L   P  EFP+
Sbjct: 61  VETPGAITIPAKKLGEIARELPPSP---VKISASGEQRVTLECGRSKFKLLGLPRDEFPT 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
                +  S+ + S  L+ L+  T FA++ EE R  LNG+ + + EE  ++  VAT+GHR
Sbjct: 118 FPSVRFNDSWRVKSGELQKLISHTAFAVSNEESRPILNGVLWELREE--RMRMVATNGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA  E+ + A  A    +IVP KA+ +I R L   +  ++++  ++ +       S+  R
Sbjct: 176 LAKMELPVEASSAPPGDLIVPPKALEQIRR-LFPAEEELEIARGDNHLGFRSPFTSVFTR 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L++G +PNY+ VIP  ND+    +   L  A+ R+S+++S +   +K+S +S  L  +V 
Sbjct: 235 LVEGPYPNYEQVIPKDNDRYALADKAALTSALKRMSVIASDQTHRIKMSFNSGMLKFSVT 294

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
            PD+G+A + + + Y    +DI FN  YLLEI+  + +     ++V     +   +  I 
Sbjct: 295 TPDLGEASDELPINYTGDQLDIGFNATYLLEILRFMPT-----EQVRLTFKAPERAATIE 349

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
            +  D             ++MP+R+
Sbjct: 350 PEGWDDPAK------YLCLVMPLRL 368


>gi|309973508|gb|ADO96709.1| DNA polymerase III beta subunit [Haemophilus influenzae R2846]
          Length = 366

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  +   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGSWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSSE---------YVIMPMRL 366


>gi|259417199|ref|ZP_05741118.1| DNA polymerase III, beta subunit [Silicibacter sp. TrichCH4B]
 gi|259346105|gb|EEW57919.1| DNA polymerase III, beta subunit [Silicibacter sp. TrichCH4B]
          Length = 373

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 145/388 (37%), Positives = 231/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER+ +L+ +  A  ++ER+NTIP+  +VL++A    +  +A+  +IE+    PA 
Sbjct: 1   MKISIERATLLKAVAQAQSVVERRNTIPILANVLIEAEGSDVMFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLNADAATG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI---NEEDLKLCAVATD 177
               EY  +F   ++VL+ L +++ FA++TEE RYYLNG++ H+         L  VATD
Sbjct: 120 MATSEYHSNFTANAAVLRRLFDKSKFAISTEETRYYLNGVYMHVATGESGGKALRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + D+      MP +IVPRK VGE+ ++L   +  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDADLPMGAEDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPVGNTRRLEVDASEFAKAVDRVATVSSERSRAVKLQLDEDRLVL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y++  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYSDERLEIGFNAKYLLEIANQVD-----RENAVFMFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R    +S         A YV+MPMR+
Sbjct: 355 LMREGSDES---------AVYVVMPMRV 373


>gi|145632378|ref|ZP_01788113.1| DNA polymerase III subunit beta [Haemophilus influenzae 3655]
 gi|145637298|ref|ZP_01792959.1| DNA polymerase III subunit beta [Haemophilus influenzae PittHH]
 gi|144987285|gb|EDJ93815.1| DNA polymerase III subunit beta [Haemophilus influenzae 3655]
 gi|145269550|gb|EDK09492.1| DNA polymerase III subunit beta [Haemophilus influenzae PittHH]
          Length = 366

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|229843948|ref|ZP_04464089.1| DNA polymerase III subunit beta [Haemophilus influenzae 6P18H1]
 gi|229812942|gb|EEP48630.1| DNA polymerase III subunit beta [Haemophilus influenzae 6P18H1]
          Length = 366

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 210/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              + +S           YV+MPMR+
Sbjct: 350 ENCEDNSSE---------YVIMPMRL 366


>gi|163743747|ref|ZP_02151121.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis 2.10]
 gi|161383008|gb|EDQ07403.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis 2.10]
          Length = 373

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 144/388 (37%), Positives = 232/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A   +++ +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDIVQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTADAASG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED---LKLCAVATD 177
               EY  +F   ++VL+ L +++ FA++TEE RYYLNG++ H+ +       L  VATD
Sbjct: 120 MASSEYHSNFTANAAVLQRLFDKSKFAISTEETRYYLNGVYMHVADGVEGGKALRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + ++      MP +IVPRK VGE+ ++L   +  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDANLPMGAEDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPAGNTRRLEVDASEFARAVDRVATVSSERSRAVKLQLDEDRLIL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y +  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYRDERLEIGFNAKYLLEIANQVD-----RENAVFMFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R    +S         A YV+MPMR+
Sbjct: 355 LMREGSDES---------AVYVVMPMRV 373


>gi|163738135|ref|ZP_02145551.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107]
 gi|161388751|gb|EDQ13104.1| DNA polymerase III subunit beta [Phaeobacter gallaeciensis BS107]
          Length = 373

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 144/388 (37%), Positives = 232/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A   +++ +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDIVQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTADAASG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED---LKLCAVATD 177
               EY  +F   ++VL+ L +++ FA++TEE RYYLNG++ H+ +       L  VATD
Sbjct: 120 MASSEYHSNFSANAAVLQRLFDKSKFAISTEETRYYLNGVYMHVADGVEGGKALRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  + ++      MP +IVPRK VGE+ ++L   +  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDANLPMGAEDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPAGNTRRLEVDASEFARAVDRVATVSSERSRAVKLQLDEDRLIL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y +  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYRDERLEIGFNAKYLLEIANQVD-----RENAVFMFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R    +S         A YV+MPMR+
Sbjct: 355 LMREGSDES---------AVYVVMPMRV 373


>gi|145630088|ref|ZP_01785870.1| DNA polymerase III subunit beta [Haemophilus influenzae R3021]
 gi|144984369|gb|EDJ91792.1| DNA polymerase III subunit beta [Haemophilus influenzae R3021]
          Length = 366

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R  +L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISREHLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|145640666|ref|ZP_01796249.1| DNA polymerase III subunit beta [Haemophilus influenzae R3021]
 gi|145274592|gb|EDK14455.1| DNA polymerase III subunit beta [Haemophilus influenzae 22.4-21]
          Length = 366

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSSE---------YVIMPMRL 366


>gi|86139416|ref|ZP_01057985.1| DNA polymerase III subunit beta [Roseobacter sp. MED193]
 gi|85823919|gb|EAQ44125.1| DNA polymerase III subunit beta [Roseobacter sp. MED193]
          Length = 373

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 143/388 (36%), Positives = 230/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A   + + +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDVAQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  + +  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTADAATG-RLTVEAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE---EDLKLCAVATD 177
               EY  +F   +++L+ L +++ FA++TEE RYYLNG++ H+++       L  VATD
Sbjct: 120 MASSEYHSNFTANAAMLRRLFDKSKFAISTEETRYYLNGVYMHVSDAAEGGKVLRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +  +      MP +IVPRK VGE+ ++L   +  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDASLPVGAEDMPGVIVPRKTVGEMRKLLDDDEMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+     +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPAGNTRRLEVDADEFARAVDRVATVSSERSRAVKLQLEEDRLIL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y +  ++I FN KYLLEI + +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYADERLEIGFNAKYLLEIANQVD-----RENAVFMFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R    +S         A YV+MPMR+
Sbjct: 355 LMREGSDES---------AVYVVMPMRV 373


>gi|301169718|emb|CBW29319.1| DNA polymerase III, beta subunit [Haemophilus influenzae 10810]
          Length = 366

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|119503574|ref|ZP_01625657.1| DNA polymerase III subunit beta [marine gamma proteobacterium
           HTCC2080]
 gi|119460636|gb|EAW41728.1| DNA polymerase III subunit beta [marine gamma proteobacterium
           HTCC2080]
          Length = 365

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 198/386 (51%), Gaps = 22/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK ++ R  +++ L     ++ER+ T+P+  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MKFSISREALIKPLNLVAGVVERRQTLPILSNVLLNLEGTQLSLTGTDLEVELIGRVEVE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
              V G ITV A  L DI + L D +QI F  ++    +  +  G   F L + P +EFP
Sbjct: 61  AGGVDGDITVPARKLVDICKSLPDSSQIEFSVDSG---KAMVKAGRGRFTLSTLPATEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           S  E     + E+A SV+K L++RT FAMA +++RYYLNG+   +     +L  VATDGH
Sbjct: 118 SVDESAGDQTLEVAQSVVKRLIDRTAFAMAQQDVRYYLNGMLLELKAG--RLRMVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+   +          II  +  +   L  L   D S+++ +  + I    +  + + 
Sbjct: 176 RLALCTANEAVSTGDAAIIIPRKGVLE--LSRLLDTDESIRLVIGSNHIRAANQQFTFTS 233

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP Y+ V+P S DK +      LRQA  R +I+S+ + + V+L LS+D L +T 
Sbjct: 234 KLVDGKFPEYERVLPKSADKTVIGQRLELRQAFTRTAILSNEKYRGVRLKLSADTLDITA 293

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    +++ FN  YLL+++  +  D++                  
Sbjct: 294 NNPEQEQAEEVVAVEYQGEELEVGFNVSYLLDVLSVLDGDQIRLSL-------------- 339

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 +   + ++ ++ YV+MPMR+
Sbjct: 340 SDSASSALLEEADEGDSLYVVMPMRL 365


>gi|126738626|ref|ZP_01754331.1| DNA polymerase III subunit beta [Roseobacter sp. SK209-2-6]
 gi|126720425|gb|EBA17131.1| DNA polymerase III subunit beta [Roseobacter sp. SK209-2-6]
          Length = 373

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 143/388 (36%), Positives = 231/388 (59%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ER  +L+ +  A  ++ER+NTIP+  +VL++A     + +A+  +IE+    PA 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDTAQFRATDLDIEVVDKAPAQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TV+A  L++IVRKL DGA ++   +   G  +++  G SNF L + P  +FP 
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTSDAATG-RLSVDAGRSNFSLATLPREDFPV 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINE---EDLKLCAVATD 177
               EY  +F   +++L+ L +++ FA++TEE RYYLNG++ H+++       L  VATD
Sbjct: 120 MATSEYHSNFTANAAMLRRLFDKSKFAISTEETRYYLNGVYMHVSDAAEGGKALRCVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +  +      MP +IVPRK VGE+ ++L   +  + VS+SE+++     ++++
Sbjct: 180 GHRLARIDAPLPLGAEDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPNITL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + ++IDG FP+Y  VIP  N + L V+ +   +AVDRV+ +SS R +AVKL L  D+L +
Sbjct: 240 TSKVIDGTFPDYTRVIPVGNTRRLEVDASEFAKAVDRVATVSSERSRAVKLQLEEDRLVL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +V+ PD G A E + V Y +  ++I FN KYLLEI   +       +  VF  +SS    
Sbjct: 300 SVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVD-----RENAVFLFNSSGDPT 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R  + +S         A YV+MPMR+
Sbjct: 355 LMREGNDES---------AVYVVMPMRV 373


>gi|15603025|ref|NP_246097.1| DNA polymerase III subunit beta [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12721508|gb|AAK03244.1| DnaN [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 366

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 204/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+  V R ++L+ L   C ++  +  IPV  +VLLQ     L I  +  E+E++      
Sbjct: 1   MQFIVSRENLLKPLQQVCGVLSSRPNIPVLNNVLLQIRGERLVITGTDLEVELSTETALL 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             DV GS T+ A    DI R L + A+IS   E +      +  G S F L + P  E+P
Sbjct: 61  RTDVQGSFTIPAKKFLDICRSLPEEAEISVSFEED---RAIVKSGRSKFNLSTLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  S L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFTLEQSTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   + +  S+I+PRK V E++R+L + D   ++ +  + + +++ ++  + 
Sbjct: 176 RLAVCTIALEQDL-QTHSVILPRKGVLELVRLLENTDLPARLQIGTNNLRIDLGNIIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + L      L+QA  R +I+S+ R ++V+L LS ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATRILEAEWDVLKQAFVRAAILSNERFRSVRLQLSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y    M++ FN  Y+L++++ +         V  RL  ++SS  I
Sbjct: 295 TNPEQEVAEEIIDVSYVGEEMEVGFNVSYILDVLNALKCQ-----RVRMRLTDASSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D  S           YV+MPMR+
Sbjct: 350 EDCDDASAE---------YVIMPMRL 366


>gi|88860615|ref|ZP_01135252.1| DNA polymerase III, beta-subunit [Pseudoalteromonas tunicata D2]
 gi|88817210|gb|EAR27028.1| DNA polymerase III, beta-subunit [Pseudoalteromonas tunicata D2]
          Length = 368

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 220/386 (56%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ R   L+ L      IERK+T+P+  +VLL+  DG L +  +  EIE+   +  S
Sbjct: 2   MQITIPRDQFLKPLIQVSGAIERKHTLPILSNVLLEIADGKLMMTGTDLEIELVACVTLS 61

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                  +T+ A  L DI + L DG++I+   ++    +V ++ G S F L S P  +FP
Sbjct: 62  HFVEDSKLTLPAKKLLDICKSLPDGSEITLSAQDS---QVLLTSGKSRFSLASLPALDFP 118

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F++  + L+ L+E THF+MA +++RYYLNG+ F    ++ ++  VATDGH
Sbjct: 119 NLEQWDGEVDFQITRNELRKLLESTHFSMANQDVRYYLNGMSFE--VDNSEIKTVATDGH 176

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+++  +   +     +I+PRK V EI+R++ S D+ V +    +   +  +  + + 
Sbjct: 177 RLALSQKKLDYSLNTQRQLIIPRKGVQEIMRLMVSDDNLVTIQFGANHFRIIDQEFTFTS 236

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  N   LR A  RVSI+S+ + + V+L+ S+ +L +T 
Sbjct: 237 KLVDGRFPDYRRVLPRGGDKVVTANREWLRSAFSRVSILSNEKFRGVRLNFSAGELKITA 296

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y+   ++I FN  Y+L++++ + +     ++V F L  SNSS  +
Sbjct: 297 NNPEQEQAEEIVEVVYSGPDLEIGFNVSYVLDVLNTLKT-----EDVSFTLSDSNSSALV 351

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
            G   D          A YV+MPMR+
Sbjct: 352 EGTGDDE---------AMYVVMPMRL 368


>gi|148251628|ref|YP_001236213.1| DNA polymerase III subunit beta [Bradyrhizobium sp. BTAi1]
 gi|146403801|gb|ABQ32307.1| DNA polymerase III, beta subunit [Bradyrhizobium sp. BTAi1]
          Length = 372

 Score =  264 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 165/387 (42%), Positives = 239/387 (61%), Gaps = 17/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+TVER+ +L+ LGH  R++ER+NTIP+  +VL++A +  L ++A+  ++E+T  + A 
Sbjct: 1   MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLVRAENARLSLRATDLDLEVTETLAAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G+ TV AH+ YDIVRKL DG+QI    + E    + I  G S F LQ+ PES+FP 
Sbjct: 61  TATAGATTVPAHMFYDIVRKLPDGSQIVLESDGERAV-LAIRAGRSKFTLQTLPESDFPD 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
               +  ++F + +  +K+L++RT FA++TEE RYYLNGI+ H     +   L AVATDG
Sbjct: 120 LAAGDMTHAFGVPAKDIKSLIDRTQFAISTEETRYYLNGIYLHAGGTAKQPSLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  ++   A  A+MP +IVPRK VGE+ R++   DS +++ LS+ +I   +  + ++
Sbjct: 180 HRLAQVDLPQPAGAAEMPGVIVPRKTVGEVQRLIEDNDSEIRIELSQGKIRFTLGQVVLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP +NDKEL V+  +   AVDRVS +SS R +AVKL+LS  +L ++
Sbjct: 240 SKLIDGTFPDYGRVIPQNNDKELIVDKADFAAAVDRVSTISSERGRAVKLALSPGRLVLS 299

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPD G A E + V Y    +DI FN +YLL+I   I       +  V RL    S   
Sbjct: 300 VTNPDSGSATEELEVEYAADALDIGFNSRYLLDIAAQIEG-----EVAVLRLADPGSPTL 354

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+ +D           NA YVLMPMR+
Sbjct: 355 IQDRDN---------RNALYVLMPMRV 372


>gi|148826360|ref|YP_001291113.1| DNA polymerase III subunit beta [Haemophilus influenzae PittEE]
 gi|148716520|gb|ABQ98730.1| DNA polymerase III subunit beta [Haemophilus influenzae PittEE]
          Length = 366

 Score =  264 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 209/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSHRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLATQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  +   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGSWEMLKQAFIRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V  RL  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMRLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSSE---------YVIMPMRL 366


>gi|118594215|ref|ZP_01551562.1| DNA polymerase III, beta subunit [Methylophilales bacterium
           HTCC2181]
 gi|118439993|gb|EAV46620.1| DNA polymerase III, beta subunit [Methylophilales bacterium
           HTCC2181]
          Length = 367

 Score =  264 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 208/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQA-NDGLLEIKASGPEIEITGAIPA 59
           M I + R  +L+ L +   I+E+++ +P+  ++LL+  ++  L+  A+  E++IT     
Sbjct: 1   MNIKINRDVLLKPLSNVSGIVEKRHALPILSNLLLEGQDNNSLKFTATDLEVQITLNAKT 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            V    SIT++A  L+DI R L +G+ I    E     +V +  G S F LQ+ P  ++P
Sbjct: 61  EVPTDFSITIAARKLFDITRSLPEGSTIDLQVEES---KVVLKAGKSKFNLQTLPAKDYP 117

Query: 120 STKEEEYVYS-FELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
             K  E       +  + LK ++++  F+MA ++IRYYLNG+ F    +  KL  V TDG
Sbjct: 118 VMKLSEEEKKLIRVPQNQLKAILKQVDFSMAQQDIRYYLNGLLFE--VDGKKLNIVGTDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRL+   +++     K  +II  +  +  I   L      V++ L++++ + + + +++ 
Sbjct: 176 HRLSFTSLELKEPQEKFQTIIPRKTILELIKL-LDETAEEVEIQLTKNQAYFSFQEINLI 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            ++IDG+FP+Y  VIP  ++ +  ++ T L  ++ R SI+S+ + + +++ +   +L + 
Sbjct: 235 SKVIDGKFPDYHRVIPVGHENKFDIDRTQLLLSMQRASILSNEKYRGIRMVIEKSQLKLI 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +N +  +A E +++ Y+   +DI FN  YL++++ NI +     +++ F  + S+SS  
Sbjct: 295 SNNSEQEQAEEELDITYDGPSIDIGFNVTYLIDVLTNIQA-----EKLSFAFNDSSSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I     D         +  YV+MPMRI
Sbjct: 350 ITIPKND---------DYKYVVMPMRI 367


>gi|229846050|ref|ZP_04466162.1| DNA polymerase III subunit beta [Haemophilus influenzae 7P49H1]
 gi|229811054|gb|EEP46771.1| DNA polymerase III subunit beta [Haemophilus influenzae 7P49H1]
          Length = 366

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|114798873|ref|YP_759292.1| DNA polymerase III subunit beta [Hyphomonas neptunium ATCC 15444]
 gi|114739047|gb|ABI77172.1| DNA polymerase III, beta subunit [Hyphomonas neptunium ATCC 15444]
          Length = 373

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 148/388 (38%), Positives = 224/388 (57%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T+ER D+L+ L H   I+ER+ TIP+  +VLL+A  G L++ A+  +IE   +  A+
Sbjct: 1   MKLTIERGDLLDALSHVQNIVERRTTIPILSNVLLEATQGALKLTATDLDIEAVDSALAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   GS+T  A  L+D+VRKL  GA++      E    + I+ G S F L + P ++F +
Sbjct: 61  VSRPGSVTAPAGTLFDVVRKLPSGAEVELELNPES-QRLTIAAGRSLFELPTLPAADFQT 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH---INEEDLKLCAVATD 177
              +E   SF++A+     L+++T FA++TEE RYYLNGI+ H    ++    L  VATD
Sbjct: 120 MTPDEGAVSFKIAAKDFARLIDKTRFAISTEETRYYLNGIYLHAAKADDGSAVLRTVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA+AE+       K+  +IVPRK VGE  R+L   D  V++ +S+++I L      +
Sbjct: 180 GHRLALAELKAPKGAEKLTGVIVPRKTVGEARRLLDGLDEDVEIEVSDTKIILRAGRAVL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP+Y  VIP  NDK++ V+      AVDRVS +S+ R ++VKLS+S+ +L +
Sbjct: 240 TSKLIDGSFPDYARVIPKGNDKKMTVDNKAFEAAVDRVSTVSAERSRSVKLSVSNGRLTL 299

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
            V++ + G   E +   Y   PM+I FN KYLL+I   I S      EV F  +   S  
Sbjct: 300 AVNHAETGAGNEEIEAEYESEPMEIGFNAKYLLDIAGQIESS-----EVEFMFNDPASPA 354

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +     DS         A +V+MP+R+
Sbjct: 355 LVLDPSDDS---------ARFVVMPLRV 373


>gi|148828163|ref|YP_001292916.1| DNA polymerase III subunit beta [Haemophilus influenzae PittGG]
 gi|148719405|gb|ABR00533.1| DNA polymerase III subunit beta [Haemophilus influenzae PittGG]
          Length = 366

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F+L  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFQLPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|145634168|ref|ZP_01789879.1| DNA polymerase III subunit beta [Haemophilus influenzae PittAA]
 gi|145268612|gb|EDK08605.1| DNA polymerase III subunit beta [Haemophilus influenzae PittAA]
          Length = 366

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LS   ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSFKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|116619147|ref|YP_821303.1| DNA polymerase III subunit beta [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222309|gb|ABJ81018.1| DNA polymerase III, beta subunit [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 372

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 184/389 (47%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ TV +SD++  L  +  ++E+K TIP+  +VLL+A D  + + A+  E+ I  + PA 
Sbjct: 1   MEFTVSKSDLVRELSLSQGVVEKKTTIPILSNVLLEAADDRITLTATDLELGIRCSCPAR 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   GS TV A  L D +R L +G     F +       +I+ G S   +       FP 
Sbjct: 61  VKKEGSGTVPARKLLDYMRLLPEGDVNMKFLD---NHWASITSGRSRTRIAGMSRESFPE 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             +     + ++    L +++ RT FA++ EE R+ LNG    +  E   L  VATDGHR
Sbjct: 118 LPQMPEPIA-QVPVKTLASMIARTSFAISMEESRFTLNGALLLMRPE--GLTMVATDGHR 174

Query: 181 LAVAEVD-IVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSL---SESRIHLNIESLS 236
           LA  + +   +  A  P   +  K     L  LS       +++    ++ +   I    
Sbjct: 175 LAYVQAEPAESGSADKPFRALVPKKAMSELTKLSDDAGEGAMAIVAGDDNHLFFQIGHRL 234

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           +  R + G FP+Y+ V+P  +    ++    +R A++RV+  +  R +A+++  +S ++ 
Sbjct: 235 LITRKLTGNFPDYERVLPKDHQFMAKLEKGEIRSAIERVAQFADERSRAIRVQFNSGEVR 294

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           +   + + G++ ES+   Y    ++I FN +YLL+ +  IS      D V F L    S+
Sbjct: 295 VFSSSVETGESEESVPAEYTGPDIEIGFNAQYLLDFLRAIS-----QDHVAFELKDQKSA 349

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             +R       +         YV+MPMRI
Sbjct: 350 GELRPAGDAIADQ------YRYVVMPMRI 372


>gi|296532158|ref|ZP_06894919.1| DNA-directed DNA polymerase III beta subunit [Roseomonas cervicalis
           ATCC 49957]
 gi|296267517|gb|EFH13381.1| DNA-directed DNA polymerase III beta subunit [Roseomonas cervicalis
           ATCC 49957]
          Length = 375

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 147/391 (37%), Positives = 215/391 (54%), Gaps = 22/391 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK +V+R+ +L+ L H   ++ER+NTIP+  +V+L A DG L + A+  EI I   +P  
Sbjct: 1   MKFSVDRAVLLKALAHVQSVVERRNTIPILANVMLAAQDGTLTLTATDMEIAIVEDVPGV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           +V   G  T  A  LY+IVRKL DGA++           + +  G     L   P  +FP
Sbjct: 61  TVSRAGRTTAPAATLYEIVRKLPDGAKVELDHAGGDAP-LALRAGRFATSLMVLPVEDFP 119

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATD 177
           S  E +  + F++  ++L+ LV+RT FA++TEE RYYLNGI+ H    +    L AVATD
Sbjct: 120 SMTEGKLPHGFQIPPALLRELVDRTKFAISTEETRYYLNGIYLHATEVDGQKVLRAVATD 179

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  E  +      MP +IVPRK V EI ++      +++V LS+++I     S+ +
Sbjct: 180 GHRLARVEEPLPEGAEGMPGVIVPRKTVNEIRKLADETGDAIEVKLSDTKISFAFGSVRL 239

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LIDG FP Y+ VIP  NDK + V+      AV RV+ +SS R + VKLSL  D L +
Sbjct: 240 TSKLIDGTFPEYERVIPRGNDKIMTVDKKAFADAVSRVAAISSERSRPVKLSLKQDSLTL 299

Query: 298 TVDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           T  +PD G+A E ++   V Y   P++I F  +YL +I D I       ++V FR    +
Sbjct: 300 TASSPDQGQAEEELDNGAVSYGSGPIEIGFQARYLADITDQI------AEKVEFRFADGS 353

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +   +             K  A YVLMPMR+
Sbjct: 354 APTVVVDA---------AKPEALYVLMPMRV 375


>gi|85374293|ref|YP_458355.1| DNA polymerase III subunit beta [Erythrobacter litoralis HTCC2594]
 gi|84787376|gb|ABC63558.1| DNA polymerase III beta subunit [Erythrobacter litoralis HTCC2594]
          Length = 375

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 155/392 (39%), Positives = 227/392 (57%), Gaps = 24/392 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGL-LEIKASGPEIEITGAIPA 59
           MK T+ER+ +L  L H   ++ER+NTIP+  ++L++A DG  +++ A+  ++++   + A
Sbjct: 1   MKATIERATLLRCLSHVQSVVERRNTIPILSNILIEAGDGSAVKVMATDLDLQVVETMNA 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            SV+  GS TVSAHLL+DI RKL DG+Q+S          + I  G S F L + P+ +F
Sbjct: 61  ASVESSGSTTVSAHLLFDIARKLPDGSQVSLEV---ADNRMTIKAGRSRFQLPTLPKDDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATD 177
           P   E +   SFE+ +  L  L++RT FA++TEE RYYLNGIF H  +E+   L A ATD
Sbjct: 118 PVIVEGDLPTSFEIPAKTLAELIDRTRFAISTEETRYYLNGIFLHVSDEDTPVLKAAATD 177

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILS-SKDSSVKVSLSESRIHLNIES-- 234
           GHRLA   +        MP +IVPRKAVGE+ ++L    D +V V LS S+I   +    
Sbjct: 178 GHRLARFTLARPDGADGMPDVIVPRKAVGELRKLLEERMDGNVVVDLSASKIRFTLGGEG 237

Query: 235 -LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSD 293
              ++ +LIDG FP+Y  VIP  NDK L+V+  +  + VDRV+ +++ + +AVK+ L +D
Sbjct: 238 GTVLTSKLIDGTFPDYSRVIPTGNDKLLKVDPKSFFEGVDRVATIATEKTRAVKMGLDAD 297

Query: 294 KLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSS 353
           K+ ++V +PD G A E +   Y     +I FN  YL +I+  I S     D V   L  +
Sbjct: 298 KVTLSVTSPDNGTASEELAAEYKSEGFEIGFNANYLKDILSQIDS-----DMVELHLADA 352

Query: 354 NSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +   IR         KD    A YVLMPMR+
Sbjct: 353 GAPTLIR---------KDENSPALYVLMPMRV 375


>gi|90408443|ref|ZP_01216603.1| Putative DNA polymerase III, beta chain [Psychromonas sp. CNPT3]
 gi|90310427|gb|EAS38552.1| Putative DNA polymerase III, beta chain [Psychromonas sp. CNPT3]
          Length = 368

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 123/387 (31%), Positives = 215/387 (55%), Gaps = 21/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIER-KNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M+ ++ R   L  L      +   +  +P+  ++L+Q  DG+L +  +  E+E+   I  
Sbjct: 1   MQFSISREAFLRPLQLVAGSVAGGRPALPIMANILIQIKDGILSLTGTDLEVELITQIHL 60

Query: 60  SV-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
                 G ITV A  L +I R L D  +I F  +++    V +  G S + L S P S+F
Sbjct: 61  ESPSEEGEITVPARKLLNICRGLSDPCEIKFQVKDD---RVTVRSGRSRYLLSSLPASDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ +  + +  F +A    K L+E T FAMA++++RYYLNG++F  + +   L +VATDG
Sbjct: 118 PNIESWKSLAEFNVAQKEFKKLIEFTQFAMASQDVRYYLNGMYFEASGD--SLRSVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   + +   I +  S+IVPRK V E++++L ++  +V + + ++ +   I +   +
Sbjct: 176 HRLASCAIKLSTPIEEQ-SLIVPRKGVVELVKLLDNEQENVTIQIGKNNLRAIIGNFIFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +L+DG FP+Y+ VIP + DKEL  +  +L+QA  R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLVDGRFPDYRRVIPRNGDKELIASRESLKQAFTRAAILSNEKFRGVRLTLSKNLLQIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E +++ Y    ++I FN  Y+L++++ + S     +++     SS  S  
Sbjct: 295 ANNPEREEAEEYIDIDYQASDLEIGFNVSYVLDVLNTLKS-----EKIKITFSSSAHSAL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D D         +A YVLMPMR+
Sbjct: 350 IESIDADD--------DALYVLMPMRL 368


>gi|39995112|ref|NP_951063.1| DNA polymerase III subunit beta [Geobacter sulfurreducens PCA]
 gi|39981874|gb|AAR33336.1| DNA polymerase III, beta subunit [Geobacter sulfurreducens PCA]
 gi|298504142|gb|ADI82865.1| DNA polymerase III, beta subunit [Geobacter sulfurreducens KN400]
          Length = 372

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 102/389 (26%), Positives = 191/389 (49%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T++R      L     I+E++NT+P+  +VL++A +  +E+ A+  E+ +  + P +
Sbjct: 1   MEFTIDRDTFSRALQKIQGIVEKRNTMPILSNVLIEALEDRIELTATDLEVGMKSSYPTT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G ITVSA  LY+IV++L D       K       V I  G + F +      EFP 
Sbjct: 61  VASQGKITVSAKKLYEIVKELPDETISFLTK---ANDYVEIRCGKAKFTIVGLSSEEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
             +        + S +L +++E+T +A+  +E +Y LNG F      +    L  VATDG
Sbjct: 118 FPKVNEESFIRIESGLLADMIEKTSYAICFDETKYNLNGTFVKASEEDGRSILRMVATDG 177

Query: 179 HRLAVAEVDIVA--QIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL++ + +            +I P+K + E+ ++   + + + +   ++   +   +  
Sbjct: 178 HRLSITQREFNGAVSPEMAKGVIFPKKGIFELKKMCEEESTQLSLGFLDNSAVIVKGNTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RL+DGEFP+Y  V+P +ND+ + V       ++ R+SI+SS + + +K+ +    + 
Sbjct: 238 VVMRLVDGEFPDYTRVVPVANDRIVTVARDPFFHSLRRMSILSSEKFKGIKMDIQESGMV 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G+A E ++  +    + I FN KYL++++  +         V   L    S 
Sbjct: 298 ISSSNPELGEASEELDAVFAGDAISIRFNAKYLIDVLAVLDESS-----VALHLKDELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             +R  D D             V+MPMR+
Sbjct: 353 AIVRPADGD---------GFTAVIMPMRL 372


>gi|260581929|ref|ZP_05849725.1| DNA polymerase III, beta subunit [Haemophilus influenzae NT127]
 gi|260095122|gb|EEW79014.1| DNA polymerase III, beta subunit [Haemophilus influenzae NT127]
          Length = 366

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  +   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGSWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|303250481|ref|ZP_07336678.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251523|ref|ZP_07533430.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256023|ref|ZP_07537811.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302650469|gb|EFL80628.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860987|gb|EFM92993.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865445|gb|EFM97340.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 367

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 208/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L + A+  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTATDLEVELTTVATLE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E +      +    S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDICRSLPEDSSISVQFEED---RALVRAARSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIEQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++  D +V++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELSRLVAVSDETVRLEIGTSNLRVSMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEVLKRALMRAAILSNEKFRGVRLALSENLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQSPEMEVGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNSTAE---------YVIMPMRL 367


>gi|78221230|ref|YP_382977.1| DNA polymerase III subunit beta [Geobacter metallireducens GS-15]
 gi|78192485|gb|ABB30252.1| DNA polymerase III, beta subunit [Geobacter metallireducens GS-15]
          Length = 373

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 101/390 (25%), Positives = 196/390 (50%), Gaps = 22/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  +++      L     I+E++NT+P+  +VL++A+   +E+ A+  E+ +  +   +
Sbjct: 1   MEFKIDKETFSRALQKIQGIVEKRNTMPILSNVLIEAHADRIELTATDLEVGMKSSYETT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G ITVSA  LY+IV++L + A     KEN+    V I  G ++F +      EFP 
Sbjct: 61  VTREGRITVSAKKLYEIVKELPEEAISFATKENDW---VEIRCGKAHFSIVGLSPEEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
             +        +  ++L +++E+T +A+  +E +Y LNG F      ++   L  VATDG
Sbjct: 118 FPKVNEESLIRIEGALLADMIEKTAYAICFDETKYNLNGTFVKATVEDDKPILRMVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPS---IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESL 235
           HRL++AE +    +    +   I   +           +    + +   ++   +   + 
Sbjct: 178 HRLSIAEKEFHGAVGPEMAKGVIFPKKGIFELKKICEEATTEELALGFMDNSAVIKKGNT 237

Query: 236 SMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKL 295
            + +RL+DGEFP+Y  V+P +NDK + V       ++ R+SI+SS + + +++ ++ +++
Sbjct: 238 VVVMRLVDGEFPDYTRVVPVANDKIVTVARDPFLHSLRRMSILSSEKFKGIRMEINGEQM 297

Query: 296 CMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
            ++  NP++G+A E ++  Y+  P+ I FN KYLL+++  ++     + EV   L    S
Sbjct: 298 IISSSNPELGEASEELDAAYSGPPLSIRFNAKYLLDVLAVLN-----ESEVALVLRDELS 352

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              ++    D             V+MPMR+
Sbjct: 353 PAIVKPAAVD---------GFTAVIMPMRL 373


>gi|53802864|ref|YP_115419.1| DNA polymerase III subunit beta [Methylococcus capsulatus str.
           Bath]
 gi|53756625|gb|AAU90916.1| DNA polymerase III, beta subunit [Methylococcus capsulatus str.
           Bath]
          Length = 366

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 109/385 (28%), Positives = 199/385 (51%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  + R D+L  L     +IER+ T+P+  +VL++   G +E+  +  E+++       
Sbjct: 1   MKFRILREDLLLPLQQVIGVIERRQTLPILSNVLIEVEAGRMELAGTDLEVQLVANTDME 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G  TV A  L DI R L +G +++F  + E    V++  G S F L + P   +P+
Sbjct: 61  GKESGRFTVPARKLMDICRLLPEGGELAFDVKPE---RVSLQCGKSRFILGALPAENYPN 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +  +    F+  + +L+  +E+T FAMA +++RYYLNG+   I +   ++ AVA+DGHR
Sbjct: 118 FEHGDPEAVFDCEAQLLRRAIEKTAFAMAQQDVRYYLNGLLLEIRQG--RIRAVASDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ E  +         II+PRK V E+ R+L+  + S  V +S + + +   + S +V+
Sbjct: 176 LALFEDAVDGMPDVARQIIIPRKGVLELGRLLARVEGSASVRISANNVRILFGTFSFAVK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L++G +P+Y+ VIP +  + + V+   LR A+ RV+++S+ + + V L +    + +   
Sbjct: 236 LVEGRYPDYERVIPKTACRVVVVDRHELRGALTRVAVLSNEKFKGVSLEIGEGLIRLRAQ 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A + +    +     + FN  YLL+ I+ ++S     D V      +N S  I 
Sbjct: 296 NPEHEEAEDEVPADVSGEAFAVGFNASYLLDAINAVAS-----DAVRMSFTDANGSCLIE 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                      +     +++MPMR+
Sbjct: 351 D---------LSDSRYRFIVMPMRL 366


>gi|300309348|ref|YP_003773440.1| DNA polymerase III subunit beta [Herbaspirillum seropedicae SmR1]
 gi|300072133|gb|ADJ61532.1| DNA polymerase III subunit beta protein [Herbaspirillum seropedicae
           SmR1]
          Length = 368

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 113/388 (29%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   +R  +L  L     I+ER++T+P+  ++L++ +   +   ++  E++IT     
Sbjct: 1   MQLVKTQRDTLLRPLQIVSGIVERRHTLPILANILIRKDGEKVSFLSTDIEVQITTHADV 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            S     + TV+A  L DI+R L D  ++S          + +  G S F LQ+    EF
Sbjct: 61  GSGSEATATTVAARKLLDILRALPDSGEVSISL---SNKRLTVQSGKSRFALQTLAAEEF 117

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + E Y     L    LK+L    HFAMA ++IRYYLNG+   +  +   + AVATD
Sbjct: 118 PTVAQAEHYNAQVNLPQKTLKHLFNMVHFAMAQQDIRYYLNGLLLVVEGK--NVIAVATD 175

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +V+          +I+PRK + E+ R+L   D  V++ ++ +++ L    + +
Sbjct: 176 GHRLAFCQVETEEDFP-RQEVIIPRKTIIELQRLLDDSDEEVQLQIANNQVKLTFADIEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP+Y  V+P        ++   L +++ R +IM+S + + V+  ++   L +
Sbjct: 235 ISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLRSLQRAAIMTSDKFKGVRWVIAPGSLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +  N D  +A+E + + Y    +DI FN  YLL++++N+      +D V   L  +NSS 
Sbjct: 295 SSTNADQEEAVEELEIDYGGDTVDIGFNVSYLLDVLNNLK-----NDYVNIALGDANSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   D           +  YV+MPMRI
Sbjct: 350 LITIPDN---------ADFKYVVMPMRI 368


>gi|307253757|ref|ZP_07535611.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258214|ref|ZP_07539957.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306863241|gb|EFM95181.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867674|gb|EFM99519.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 367

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 118/387 (30%), Positives = 206/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTGTDLEVELTTVATLE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E +      +    S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDICRSLPEDSSISVQFEED---RALVRAARSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIEQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++  D +V++ +  S +  ++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELSRLVAVSDETVRLEIGTSNLRASMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEVLKRALMRAAILSNEKFRGVRLALSENLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQSPEMEVGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNSTAE---------YVIMPMRL 367


>gi|154706526|ref|YP_001423441.1| DNA polymerase III, beta chain [Coxiella burnetii Dugway 5J108-111]
 gi|154355812|gb|ABS77274.1| DNA polymerase III, beta chain [Coxiella burnetii Dugway 5J108-111]
          Length = 369

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 114/387 (29%), Positives = 198/387 (51%), Gaps = 20/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEIT--GAIP 58
           MK+ + R  +L+ L     ++ERK T+P+  +VLL      L I  +  E+E+     + 
Sbjct: 1   MKLNLIRETLLKPLQLVIGVVERKQTLPILSNVLLSIETDQLSITGTDLEVELIGQTKLD 60

Query: 59  ASVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +      +T+    L DI R L D A I  +++ E   ++ +  G S F L + P  +F
Sbjct: 61  KNSTESSRLTLPGRKLMDICRALPDNAPIELYRDKE---KIILRSGRSRFMLSTLPSEDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ +  E      L  S  ++L+ RTHFAMA +++RYYLNG+         KL A+ATDG
Sbjct: 118 PAVERRESQLELALPQSTFRHLLYRTHFAMAQQDVRYYLNGLLLETYPN--KLRAIATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   + +         II+PRK + E+LR+L   ++   + +  + I ++    + +
Sbjct: 176 HRLAANTLLVQTNTEHRLQIIIPRKGIIELLRLLEEDEALATIRIGNNHIGVSTNDFTFT 235

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LI+G FP+ + VIP   DK+  ++   L+QA+ R +I+ + + + V   L    L + 
Sbjct: 236 SKLIEGRFPDCERVIPKGGDKQFVIDRDILKQALSRTAILCNEKFKGVCFELRQGLLRIL 295

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             NP+   A E +N+ Y    +DI FN  Y+L+I++ ++S       +     +++SSV 
Sbjct: 296 ATNPEQEAAEEEINIDYTGENLDIGFNVGYVLDILNVVNS-----GNIRLTFSTADSSVL 350

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   +  S        ++ +V+MPMR+
Sbjct: 351 INEVENPS--------DSAFVVMPMRL 369


>gi|53729133|ref|ZP_00134099.2| COG0592: DNA polymerase sliding clamp subunit (PCNA homolog)
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126207490|ref|YP_001052715.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           L20]
 gi|165975459|ref|YP_001651052.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190149271|ref|YP_001967796.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307244803|ref|ZP_07526902.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249201|ref|ZP_07531198.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307262582|ref|ZP_07544213.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|126096282|gb|ABN73110.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165875560|gb|ABY68608.1| DNA polymerase III beta chain [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189914402|gb|ACE60654.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306854248|gb|EFM86454.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858725|gb|EFM90784.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306872080|gb|EFN03793.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 367

 Score =  262 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 118/387 (30%), Positives = 207/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTGTDLEVELTTVATLE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E +      +    S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDICRSLPEDSSISVQFEED---RALVRAARSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIEQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++  D +V++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELSRLVAVSDETVRLEIGTSNLRVSMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEVLKRALMRAAILSNEKFRGVRLALSENLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQSPEMEVGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNSTAE---------YVIMPMRL 367


>gi|145628066|ref|ZP_01783867.1| DNA polymerase III subunit beta [Haemophilus influenzae 22.1-21]
 gi|144979841|gb|EDJ89500.1| DNA polymerase III subunit beta [Haemophilus influenzae 22.1-21]
          Length = 366

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDESEITVTFEQD---RALVQSGRSRFTLATQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETSDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  +   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGSWEMLKQAFIRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|189423084|ref|YP_001950261.1| DNA polymerase III subunit beta [Geobacter lovleyi SZ]
 gi|189419343|gb|ACD93741.1| DNA polymerase III, beta subunit [Geobacter lovleyi SZ]
          Length = 372

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 114/389 (29%), Positives = 203/389 (52%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M   ++R   L+ L     I+E++ ++P+  ++L++A    LEI A+  E+ + G  PA 
Sbjct: 1   MNFKIDRDTFLKALQKVQGIVEKRTSMPILSNILIEAQGDNLEIIATDLEVGLKGNYPAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G ITV A  LY+IV++L +       KEN+    V I+ G   F +   P  EFP+
Sbjct: 61  VEKDGRITVGAKKLYEIVKELPNQEITFSTKENDW---VEITCGKVRFNIVGLPSDEFPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIF--FHINEEDLKLCAVATDG 178
               +     EL +++L+ ++E+T +A+  +E +Y LNGIF     +E+   L  VATDG
Sbjct: 118 VATVKDEQLLELEAALLRKMIEKTSYAICNDETKYNLNGIFTRVEQSEKGQCLKMVATDG 177

Query: 179 HRLAVAEVDI--VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL++A       A    +  +I+P+K + EI +I    D  ++    +S   +     +
Sbjct: 178 HRLSIASGPFSGTANPELLKGVILPKKGIFEIKKITDEGDGLLQFGFVDSSAVIKKGDTT 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RL+DGEFP+Y  VIP +N++ ++     L  AV R++I+SS + + + L +  + + 
Sbjct: 238 LIMRLVDGEFPDYTRVIPAANEQIVKAPREELIHAVRRMAILSSEKFKGIMLEIEGNAVK 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G A+E ++V Y+  P  + FN +YLL+++    S       V+ +  +  S 
Sbjct: 298 ISSSNPELGDAMEELDVSYDGNPFSVRFNARYLLDVLMVCESQH-----VLMKFKNELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             +     D             V+MPMR+
Sbjct: 353 SIVTPDSDDE---------LLAVIMPMRL 372


>gi|114319168|ref|YP_740851.1| DNA polymerase III, beta subunit [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225562|gb|ABI55361.1| DNA polymerase III, beta subunit [Alkalilimnicola ehrlichii MLHE-1]
          Length = 366

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 208/385 (54%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I ++R D+L+ L     ++ER+ T+PV  +V L+  DGL  + A+  E+E+  ++P  
Sbjct: 1   MRIDIQREDLLKPLQAIIGVVERRQTLPVLANVRLELGDGLARLTATDLEVELVASLPCQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G IT+ A  L DI R L D +QI    + E     ++  G S F L +    ++PS
Sbjct: 61  VTEGGDITLPARKLLDICRNLPDQSQIQLQVDGE---RASLRAGRSRFTLATLSADDYPS 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            ++     +  L    L+ L+ERTHF+MA +++RYYLNG+      E      VATDGHR
Sbjct: 118 IEDIGARETVRLPQGQLRKLIERTHFSMAVQDVRYYLNGLMVE--LEPAMARMVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+AE  I   +     +IVPRK V E+LR+L   D    + L ++ I + +  +  + +
Sbjct: 176 LALAEQAIDTGVEAPRQVIVPRKGVQELLRLLDHSDEGADLELGDNHIRVKLGDVRFTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+Y+ V+P + +    VN  +LR A+ RVSI+S+ + + V+  L    L +   
Sbjct: 236 LIDGRFPDYRRVVPEATETPATVNREDLRHALLRVSILSNEKYRGVRFLLDGGTLKVASH 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A E ++V Y   P+++ FN  Y+L+ +  +      D++V   L  S SS  I+
Sbjct: 296 NPEQEEAEEEVSVDYGGAPLEVGFNAGYVLDALGALD-----DEDVRLTLRDSASSGLIQ 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
           G D            + YV+MPMR+
Sbjct: 351 GVDD---------QTSRYVVMPMRL 366


>gi|145638186|ref|ZP_01793796.1| DNA polymerase III subunit beta [Haemophilus influenzae PittII]
 gi|145272515|gb|EDK12422.1| DNA polymerase III subunit beta [Haemophilus influenzae PittII]
          Length = 366

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNTLKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|260912770|ref|ZP_05919256.1| DNA-directed DNA polymerase III beta subunit [Pasteurella dagmatis
           ATCC 43325]
 gi|260633148|gb|EEX51313.1| DNA-directed DNA polymerase III beta subunit [Pasteurella dagmatis
           ATCC 43325]
          Length = 366

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 122/386 (31%), Positives = 206/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+  V R ++L+ L   C ++  +  IPV  +VLLQ N   L I  +  E+E++      
Sbjct: 1   MQFIVSRENLLKPLQQVCGVLSSRPNIPVLNNVLLQINGDCLVITGTDLEVELSTQSALL 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           S DV G+ T+ A    DI R L + A+IS   E +      +  G S F L + P  E+P
Sbjct: 61  STDVKGNFTIPAKKFLDICRSLPENAEISVSFEED---RAIVKSGRSKFNLSTLPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F +  S L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFTIEQSTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   + +  S+I+PRK V E++R+L + D   ++ +  + + + + ++  + 
Sbjct: 176 RLAVCTIALEQDL-QTHSVILPRKGVLELVRLLENTDLPARLQIGTNNLRIELGNIIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  + L  +   L+QA  R +I+S+ R ++V+L LS ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATRILEADWDVLKQAFVRAAILSNERFRSVRLQLSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+   A E ++V Y    M++ FN  Y+L++++ +         V  RL  ++SS  I
Sbjct: 295 TNPEQEVAEEIIDVSYIGEEMEVGFNVSYILDVLNALKCQ-----RVRMRLTDASSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 EDCEDASAE---------YVIMPMRL 366


>gi|303251823|ref|ZP_07337994.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307249124|ref|ZP_07531131.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302649253|gb|EFL79438.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854412|gb|EFM86608.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 367

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 118/387 (30%), Positives = 208/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTGTDLEVELTTVATLE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E +      +    S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDICRSLPEDSSISVQFEED---RALVRAARSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA +++RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIEQSTLARLIDATQFSMANQDVRYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++  D +V++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELSRLVAVSDETVRLEIGTSNLRVSMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEVLKRALMRAAILSNEKFRGVRLALSENLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQSPEMEVGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNSTAE---------YVIMPMRL 367


>gi|29653366|ref|NP_819058.1| DNA polymerase III, beta chain [Coxiella burnetii RSA 493]
 gi|153209960|ref|ZP_01947547.1| DNA polymerase III, beta subunit [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165924212|ref|ZP_02220044.1| DNA polymerase III, beta subunit [Coxiella burnetii RSA 334]
 gi|212211671|ref|YP_002302607.1| DNA polymerase III, beta chain [Coxiella burnetii CbuG_Q212]
 gi|212217690|ref|YP_002304477.1| DNA polymerase III, beta chain [Coxiella burnetii CbuK_Q154]
 gi|29540628|gb|AAO89572.1| DNA polymerase III, beta chain [Coxiella burnetii RSA 493]
 gi|120575206|gb|EAX31830.1| DNA polymerase III, beta subunit [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165916346|gb|EDR34950.1| DNA polymerase III, beta subunit [Coxiella burnetii RSA 334]
 gi|212010081|gb|ACJ17462.1| DNA polymerase III, beta chain [Coxiella burnetii CbuG_Q212]
 gi|212011952|gb|ACJ19332.1| DNA polymerase III, beta chain [Coxiella burnetii CbuK_Q154]
          Length = 369

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 114/387 (29%), Positives = 199/387 (51%), Gaps = 20/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEIT--GAIP 58
           MK+ + R  +L+ L     ++ERK T+P+  +VLL      L I  +  E+E+     + 
Sbjct: 1   MKLNLIRETLLKPLQLVIGVVERKQTLPILSNVLLSIETDQLSITGTDLEVELIGQTKLD 60

Query: 59  ASVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +      +T+    L DI R L D A I  +++ E   ++ +  G S F L + P  +F
Sbjct: 61  KNSTESSRLTLPGRKLMDICRALPDNAPIELYRDKE---KIILRSGRSRFMLSTLPSEDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ +  E      L  S  ++L+ RTHFAMA +++RYYLNG+         KL A+ATDG
Sbjct: 118 PAVERRESQLELALPQSTFRHLLYRTHFAMAQQDVRYYLNGLLLETYPN--KLRAIATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   + +         II+PRK + E+LR+L   ++   + +  + I ++    + +
Sbjct: 176 HRLAANTLLVQTNTEHRLQIIIPRKGIIELLRLLEEDEALATIRIGNNHIGVSTNDFTFT 235

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LI+G FP+ + VIP   DK+  ++   L+QA+ R +I+ + + + V+  L    L + 
Sbjct: 236 SKLIEGRFPDCERVIPKGGDKQFVIDRDILKQALSRTAILCNEKFKGVRFELRQGLLRIL 295

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             NP+   A E +N+ Y    +DI FN  Y+L+I++ ++S       +     +++SSV 
Sbjct: 296 ATNPEQEAAEEEINIDYTGENLDIGFNVGYVLDILNVVNS-----GNIRLTFSTADSSVL 350

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   +  S        ++ +V+MPMR+
Sbjct: 351 INEVENPS--------DSAFVVMPMRL 369


>gi|161831398|ref|YP_001595902.1| DNA polymerase III, beta subunit [Coxiella burnetii RSA 331]
 gi|161763265|gb|ABX78907.1| DNA polymerase III, beta subunit [Coxiella burnetii RSA 331]
          Length = 369

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 114/387 (29%), Positives = 199/387 (51%), Gaps = 20/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEIT--GAIP 58
           MK+ + R  +L+ L     ++ERK T+P+  +VLL      L I  +  E+E+     + 
Sbjct: 1   MKLNLIRETLLKPLQLVIGVVERKQTLPILSNVLLSIETDQLSITGTDLEVELIGQTKLD 60

Query: 59  ASVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +      +T+    L DI R L D A I  +++ E   ++ +  G S F L + P  +F
Sbjct: 61  KNSTESSRLTLPGRKLMDICRALPDNAPIELYRDKE---KIILRSGRSRFMLSTLPSEDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ +  E      L  S  ++L+ RTHFAMA +++RYYLNG+         KL A+ATDG
Sbjct: 118 PAVERRESQLELALPQSTFRHLLYRTHFAMAQQDVRYYLNGLLLETYPN--KLRAIATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   + +         II+PRK + E+LR+L   ++   + +  + I ++    + +
Sbjct: 176 HRLAANTLLVQTNTEHRLQIIIPRKGIIELLRLLEEDEALAAIRIGNNHIGVSTNDFTFT 235

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LI+G FP+ + VIP   DK+  ++   L+QA+ R +I+ + + + V+  L    L + 
Sbjct: 236 SKLIEGRFPDCERVIPKGGDKQFVIDRDILKQALSRTAILCNEKFKGVRFELRQGLLRIL 295

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             NP+   A E +N+ Y    +DI FN  Y+L+I++ ++S       +     +++SSV 
Sbjct: 296 ATNPEQEAAEEEINIDYTGENLDIGFNVGYVLDILNVVNS-----GNIRLTFSTADSSVL 350

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   +  S        ++ +V+MPMR+
Sbjct: 351 INEVENPS--------DSAFVVMPMRL 369


>gi|309751342|gb|ADO81326.1| DNA polymerase III beta subunit [Haemophilus influenzae R2866]
          Length = 366

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNTLKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|332288918|ref|YP_004419770.1| DNA polymerase III subunit beta [Gallibacterium anatis UMN179]
 gi|330431814|gb|AEC16873.1| DNA polymerase III subunit beta [Gallibacterium anatis UMN179]
          Length = 366

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 202/386 (52%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  V R ++L+ L   C ++  + ++PV  ++L+Q +   L +  S  E+E++  +   
Sbjct: 1   MQFIVARENLLKPLQQVCGVLNNRPSLPVLNNILVQIDGDRLTLTGSDLEVELSTFVQLE 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L + AQI+   EN+    V ++   S F L + P   +P
Sbjct: 61  SSSENGTFTIPARKFLDICRSLNEDAQITVNYEND---RVLVTAERSKFNLATLPAESYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +      +  SVL+ ++E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTQLDVDVELNIEQSVLRRVMEATQFSMANQDARYFLNGMKFETENN--VLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +   +     I+  +  +  +   L S   +  + + +S I +++ ++  + 
Sbjct: 176 RLAVCGIQLQQNVPDYAIIVPRKGVIELMRL-LDSNSENAYIRMGQSNIQVHLNNVIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P + D+ L V+  +L+QA  R +I+S+ R + V+L + +++L +  
Sbjct: 235 KLIDGRFPDYRRVLPKNADRILEVDWNSLKQACIRAAILSNERFRGVRLIIEANQLKILA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NPD  +A E ++V Y   PM++ FN  Y+L++++ +         V  RL  + SS  I
Sbjct: 295 QNPDQEEAEEVIDVSYQGEPMEVGFNVSYILDVLNALKCQS-----VRMRLTDATSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              ++          NA YV+MPMR+
Sbjct: 350 EDCEQ---------SNAEYVIMPMRL 366


>gi|87199450|ref|YP_496707.1| DNA polymerase III subunit beta [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87135131|gb|ABD25873.1| DNA polymerase III, beta subunit [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 375

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 144/392 (36%), Positives = 221/392 (56%), Gaps = 24/392 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAIPA 59
           MK T+ER+ +L  L H   ++ER+NTIP+  +VL++A  D  + + A+  +++I   + A
Sbjct: 1   MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIEAAPDSTVRLMATDLDLQIIETMSA 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            SV+  G+ITVSAHLL+DI RKL DG+Q+S          + +  G S F L + P  +F
Sbjct: 61  VSVEAPGAITVSAHLLFDIARKLPDGSQVSLET---SDNRMIVKAGRSRFQLPTLPRDDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKL-CAVATD 177
           P   E +   SFE+ +  L  L++RT FA++TEE RYYLNGIF H++++   +  A ATD
Sbjct: 118 PVIVEGDLPTSFEIPARTLAELIDRTRFAISTEETRYYLNGIFLHVSDDPQPVLKAAATD 177

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSE----SRIHLNIE 233
           GHRLA   +        MP +IVPRK VGE+ ++L     S  +                
Sbjct: 178 GHRLARFTITRPDGAEGMPDVIVPRKCVGELRKLLEEVLDSAVLIDLSASKIRFTLGGEN 237

Query: 234 SLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSD 293
            + ++ +LIDG FP+Y  VIP  NDK L+++  +  + VDRV+ +++ + +AVK++L +D
Sbjct: 238 GVVLTSKLIDGTFPDYSRVIPTGNDKLLKLDPRSFFEGVDRVATIATEKTRAVKMALEND 297

Query: 294 KLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSS 353
           ++ ++V +PD G A E +   Y+    +I FN  YL +I+  I       D V   L  +
Sbjct: 298 RVTLSVTSPDNGTAAEELPADYSSTGFEIGFNANYLKDILSQIDG-----DTVELHLADA 352

Query: 354 NSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +   IR         KD+K  A YVLMPMR+
Sbjct: 353 GAPTLIR---------KDDKSAALYVLMPMRV 375


>gi|296131552|ref|YP_003638799.1| DNA polymerase III, beta subunit [Thermincola sp. JR]
 gi|296030130|gb|ADG80898.1| DNA polymerase III, beta subunit [Thermincola potens JR]
          Length = 370

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 194/386 (50%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T  +++++  +  A R +  KN +P+   +L++  +  L + A+  E+ I   +P +
Sbjct: 1   MKFTSNKNNMVYGVQVAQRAVSPKNPLPILSGILMKLKNNNLCLTATDLELGIECTVPVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS+ + A  L +IVRKL D   +  F   +      + +  S   +  +   EFP 
Sbjct: 61  GSSEGSVVLPAKYLSEIVRKLPD--VLIEFSVEKENNVATLKYAQSKTTIHGYSADEFPL 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               +   ++ +   + KN++++  FA A +E R    G+ F +  +  +L  VATD HR
Sbjct: 119 LPSLDGETTYVIKQELFKNMIKQVTFATAADENRPIFTGVLFEVEGD--ELRLVATDTHR 176

Query: 181 LAVAEVDIVAQ--IAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           LA+    I +     +    ++P KA+ EI+RI+  ++  VK++ S +++ + ++++ + 
Sbjct: 177 LALRIGAIGSHGYSGEKTGALIPAKALNEIVRIMPPENEEVKITFSNNQVVMELDNIRLI 236

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            RLI+G+FPNY+ VIP     ++R+N      AV+R S+++      ++L++ +  L + 
Sbjct: 237 SRLIEGQFPNYKQVIPQGCKSKIRLNTREFLDAVERASLLAKDGSNVIRLAVQNHTLIIN 296

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            ++PD+G   E + +        I FN KYL++++  I +     +EV   L  S S   
Sbjct: 297 SNSPDIGTIHEELPIVLEGEETQIAFNSKYLIDVLRVIDA-----EEVFLELTGSLSPGI 351

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMR 384
           ++  + D         N  Y+++P+R
Sbjct: 352 VKPVEGD---------NYLYLILPVR 368


>gi|319775074|ref|YP_004137562.1| DNA polymerase III subunit beta [Haemophilus influenzae F3047]
 gi|329123015|ref|ZP_08251586.1| DNA-directed DNA polymerase III beta subunit [Haemophilus aegyptius
           ATCC 11116]
 gi|317449665|emb|CBY85871.1| DNA polymerase III, beta subunit [Haemophilus influenzae F3047]
 gi|327471946|gb|EGF17386.1| DNA-directed DNA polymerase III beta subunit [Haemophilus aegyptius
           ATCC 11116]
          Length = 366

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDESEITVTFEQD---RALVQSGRSRFTLTTQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNTLKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|58038493|ref|YP_190457.1| DNA polymerase III subunit beta [Gluconobacter oxydans 621H]
 gi|58000907|gb|AAW59801.1| DNA polymerase III, beta chain [Gluconobacter oxydans 621H]
          Length = 374

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 138/390 (35%), Positives = 216/390 (55%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V+R+ +   L H   + E++NTIP+  +VL+   D +L + A+  EI +   +PAS
Sbjct: 1   MKFKVDRTLLQRALAHIHGVAEKRNTIPILANVLMSYQDDVLRLTATDMEIAVVEDVPAS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
            +  GS TV A +L++IVRKL DG  + F  ++     + +  G     L   P  +FP+
Sbjct: 61  GERSGSTTVPAAVLFEIVRKLPDGVALEFDHQDSEAP-LALRAGRYATSLNVLPVDDFPA 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEE--DLKLCAVATDG 178
               +  + F + ++ L+ L++RT FA++ EE RYYLNGI+ H+ E      L AVATDG
Sbjct: 120 MVAGDLPHRFSIPAATLRGLIDRTKFAISNEETRYYLNGIYLHVAENGSIPMLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E ++      MP +I+PRK + E+ ++L    + ++VSLS++RI      + ++
Sbjct: 180 HRLARVETELPEGARGMPGVIIPRKTINELRKLLDEGAADLEVSLSDTRIQFQAGPVLLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP Y+ VIP  ND+ LRV   +   AV RV+ +S  R + VKLS++ + L ++
Sbjct: 240 SKLIDGTFPEYERVIPKGNDRILRVGKRDFAAAVGRVAAISQERSRPVKLSVTQNMLNLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             +PD G A E ++   V Y+  P++I F  +YL +I D I        EV F    S++
Sbjct: 300 ATSPDQGVAHEELDENAVSYDAAPIEIGFQARYLTDITDQIDV------EVEFAFSDSSA 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R              +A YVLMPMR+
Sbjct: 354 PTIVRDT---------ASPSALYVLMPMRV 374


>gi|49086146|gb|AAT51331.1| PA0002 [synthetic construct]
          Length = 368

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  T++R  +L+ L     ++ER  T+PV  +VLL      L +  +  E+E+ G +   
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERLQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLE 60

Query: 61  -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G ITV A  L DI + L +   I    E +   ++ +  G S F L + P ++FP
Sbjct: 61  DAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQ---KLLVKAGRSRFTLSTLPANDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E     +F +A S L+ L++RT FAMA +++RYYLNG+   +N     L +VATDGH
Sbjct: 118 TVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGG--TLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+  +D          +IVPRK + E+ R+L+ +D  V + L +  I       + + 
Sbjct: 176 RLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG+FP+Y+ V+P   DK +  +   LR+A  R +I+S+ + + ++L LS+  L +  
Sbjct: 236 KLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V YN   ++I FN  YLL+++  I +     ++V F L  SNSS  +
Sbjct: 296 NNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGT-----EQVRFILSDSNSSALV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D D         ++ YV+MPMR+
Sbjct: 351 HEADND---------DSAYVVMPMRL 367


>gi|307260452|ref|ZP_07542147.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869855|gb|EFN01637.1| DNA polymerase III subunit beta [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 367

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 118/387 (30%), Positives = 207/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTGTDLEVELTTVAILE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E +      +    S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDICRSLPEDSSISVQFEED---RALVRAARSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIEQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++  D +V++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELSRLVAVSDETVRLEIGTSNLRVSMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEVLKRALMRAAILSNEKFRGVRLALSENLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQSPEMEVGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNSTAE---------YVIMPMRL 367


>gi|162147556|ref|YP_001602017.1| DNA polymerase III subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542190|ref|YP_002274419.1| DNA polymerase III subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786133|emb|CAP55715.1| DNA polymerase III subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209529867|gb|ACI49804.1| DNA polymerase III, beta subunit [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 374

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 210/390 (53%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+  +R+ +L+ L H   + E++NTIP+  +VL+   DG L + A+  EI +   I A 
Sbjct: 1   MKLKADRATLLKALAHIQSVAEKRNTIPILANVLINVADGRLTLTATDMEIAVVEEIGAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G++T  A +LY+I RKL DG  I           + +  G     L      +FPS
Sbjct: 61  TSRNGAVTAPAAVLYEIARKLPDGVAIELDHTGGDAP-LALRAGRYATSLNVLDVDDFPS 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDL--KLCAVATDG 178
                  Y F + ++VL+ L++RT FA++TEE RYYLNGI+ H+   D    L AVATDG
Sbjct: 120 MMAGTLPYHFTMPAAVLRGLIDRTRFAISTEETRYYLNGIYLHVAAGDEGSMLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E ++     +MP +IVPRK V E+ ++L      V V LS++RI   + +++++
Sbjct: 180 HRLARVETEVPPGAEEMPGVIVPRKTVAELRKLLDEGTEDVAVGLSDTRIQFTVGTVTLT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP Y  VIP  NDK LRV   +   AV RV+ +S  R + VKLS+  + L ++
Sbjct: 240 SKLIDGTFPEYDRVIPRGNDKILRVGKRDFSDAVARVAAISQERSRPVKLSIGHNLLTLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             +PD G A E ++   V Y+  P++I F  +YL +I D I        +V F    S++
Sbjct: 300 AVSPDQGTAKEELDDNYVTYDSTPLEIGFQARYLNDITDQID------KDVEFAFSDSSA 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R              +A YVLMPMR+
Sbjct: 354 PTIVRDV---------ASPSALYVLMPMRV 374


>gi|319897496|ref|YP_004135693.1| DNA polymerase iii, beta subunit [Haemophilus influenzae F3031]
 gi|317433002|emb|CBY81373.1| DNA polymerase III, beta subunit [Haemophilus influenzae F3031]
          Length = 366

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDESEITVIFEQD---RALVQSGRSRFTLATQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLGQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|300112747|ref|YP_003759322.1| DNA polymerase III subunit beta [Nitrosococcus watsonii C-113]
 gi|299538684|gb|ADJ27001.1| DNA polymerase III, beta subunit [Nitrosococcus watsonii C-113]
          Length = 367

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 208/386 (53%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ +++R +I+  L   C ++ER++T+P+  +VLL   D  L + A+  EIEI  A    
Sbjct: 1   MRFSIKREEIVRHLVTICGVVERRHTLPILSNVLLSVKDSRLSLMATDLEIEIKTAFDIL 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G IT+SA    +I R L   +     +      +  I  G S F L + P  +FPS
Sbjct: 61  SPEEGKITISARKFLEICRALPSQSA---LEAQYKEGQFYIHSGRSRFTLSTLPAEDFPS 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               + V   EL  + LK L+ RT F MA +++RYYLNG+   + EE   + AVATDGHR
Sbjct: 118 IDSIDAVAELELTQAELKKLLYRTVFCMAHQDVRYYLNGLLLELTEE--AIHAVATDGHR 175

Query: 181 LAVAEV-DIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           LA+A +     Q       I+PRKA+ E++R+L   + SV++    +++    + LS S 
Sbjct: 176 LALASLAKGSQQAGTEIQSIIPRKAILELVRLLEESNDSVRLKFGTNQMRAEFQGLSFST 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG+FP+Y+ VIP   +K+   +    +QA+ RV+I+++ + + V L LS+ KL   V
Sbjct: 236 KLIDGQFPDYKRVIPVGCEKQFVADREKFKQALVRVNILTNDKYRGVHLHLSALKLQAIV 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N + G A E +++ Y    ++I FN  YL++++  I +     +E+     ++NSS  I
Sbjct: 296 TNLEQGSAEEELDIKYQGENLEIVFNNFYLIDVLSIIDT-----EEIKLTFTNANSSCLI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              D         K ++ YV+MPMR+
Sbjct: 351 TPID---------KADSKYVVMPMRL 367


>gi|114778881|ref|ZP_01453678.1| DNA polymerase III subunit beta [Mariprofundus ferrooxydans PV-1]
 gi|114550850|gb|EAU53416.1| DNA polymerase III subunit beta [Mariprofundus ferrooxydans PV-1]
          Length = 366

 Score =  261 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 203/385 (52%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKIT+ R+ +L+L+     I+E+++TIP+  +VL++AN   + + A+  E+ I   I  S
Sbjct: 1   MKITLSRTPLLQLVQRCQSIVEKRHTIPILANVLIEANQDGITMTATDLEVGIRSHIDGS 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G+ TVSA  L++I+R+L     +S          ++I  G S F + + P  E+P+
Sbjct: 61  VEEDGTATVSAKKLFEIIRELDAEMDVSLTT---GNGFISIVSGSSRFRVNTRPADEYPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E+E      L  + L +++  T FAM+T+E R YL G  F ++ +   L  V TDGHR
Sbjct: 118 MAEQEGTIKIVLPGNALADMIAATSFAMSTDETRKYLTGTLFELD-DSQNLRLVTTDGHR 176

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA++E+ +  Q A   S IVP+KAV EI ++       V++ +SE +I L   S +++ +
Sbjct: 177 LALSEIRL-QQAAGTASCIVPKKAVIEIRKLCEENQGQVELLISERQIRLVAGSNTLTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LID  FP YQ+VIP +N    R+  T   Q + R  I+++     ++L  S   L ++  
Sbjct: 236 LIDARFPVYQDVIPVNNPNIARIERTAFDQILRRNMIVANEFTHDIRLIFSDQGLDISAH 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N +  ++ E +   Y    + I FN +YL + +  I +       V   L    S V IR
Sbjct: 296 NSEQEESEEHLAAEYPGHEVAIGFNGRYLRDALGAIRA-----PSVCMELKDELSPVLIR 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
           G+D +          + YV+MPMRI
Sbjct: 351 GEDDEQ---------SRYVIMPMRI 366


>gi|322513484|ref|ZP_08066594.1| DNA-directed DNA polymerase III beta subunit [Actinobacillus ureae
           ATCC 25976]
 gi|322120703|gb|EFX92587.1| DNA-directed DNA polymerase III beta subunit [Actinobacillus ureae
           ATCC 25976]
          Length = 367

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 118/387 (30%), Positives = 206/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLSSRPTLPVINNILLEIEGDRLSLTGTDLEVELTTVATLE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E        +    S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDICRSLPEDSSISVQFEE---YRALVRAARSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIEQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++  D +V++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELSRLVAVSDETVRLEIGTSNLRVSMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEVLKRALMRAAILSNEKFRGVRLALSENLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQSLEMEVGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNSTAE---------YVIMPMRL 367


>gi|302390799|ref|YP_003826619.1| DNA polymerase III subunit beta [Acetohalobium arabaticum DSM 5501]
 gi|302202876|gb|ADL11554.1| DNA polymerase III, beta subunit [Acetohalobium arabaticum DSM
           5501]
          Length = 365

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 188/384 (48%), Gaps = 21/384 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I ++R +  + +    + I  K+T+P+   +L++  +  L++  +  E+ I   + A+
Sbjct: 1   MQIKIDRKNFYDGIQTVRKAISSKSTLPILSGILIETQEKKLKLVGTDLELGIECRVDAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G+I + A+ L +IVR+L +        E +   ++ IS G S F +   P  E+P 
Sbjct: 61  IIKDGAIVLPANHLANIVRELPNKE---LELELKKDNKIEISCGLSQFKIHGSPADEYPL 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E      + L+    + ++ R  FA + +E R +L G     + ++  L  VATD +R
Sbjct: 118 LPEVGSGIEYTLSQEKFQAMINRIKFATSDDESRPFLTGGLL--SIDNENLKMVATDSYR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA  ++++   +     II  +      L  L + +  ++  +++++I      +++  R
Sbjct: 176 LAYTQLELDKDLKNEKIIIPSKTLNE--LSKLLNSEDEIRFLITDNQILFEFSEITIISR 233

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LI+G+FPNY+ VIP ++  E+++    L  A  R ++++      +K    +DKL +  +
Sbjct: 234 LIEGQFPNYKQVIPDNHKTEIKLKKKELLNATKRSALVARNNSNIIKTKFQNDKLMIESN 293

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
            P++G+A E ++   +    +I FN  YL++++  I      ++E++  L    S   I+
Sbjct: 294 APEVGQAYEELSTSQHGDDTEIAFNANYLIDVLKVID-----NEEILIELSGELSPGVIK 348

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMR 384
             D D         N  +V+MP+R
Sbjct: 349 EVDND---------NYIHVIMPVR 363


>gi|95929987|ref|ZP_01312727.1| DNA polymerase III, beta subunit [Desulfuromonas acetoxidans DSM
           684]
 gi|95133956|gb|EAT15615.1| DNA polymerase III, beta subunit [Desulfuromonas acetoxidans DSM
           684]
          Length = 372

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 212/389 (54%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAND--GLLEIKASGPEIEITGAIP 58
           MKIT +++D+L+ L     ++E+K T+P+  +VLL+ +     L + A+  EI I   I 
Sbjct: 1   MKITTKKNDLLKGLTLVQGVVEKKKTLPILSNVLLETDKETSQLILTATDLEIGIKTHIK 60

Query: 59  ASVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
           A +   G IT+SA  LY+IV++L D        + +    V I +G + F +      EF
Sbjct: 61  AEIISDGKITISAKKLYEIVKELADAE---ITLKVKENNWVEIINGKAKFNIVGLSSEEF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVAT 176
           P   +++   +  +    LKN++++T +A++ +E ++ LNGI+ H    +    +  V+T
Sbjct: 118 PLITDKQTDNNLSIDGITLKNIIDKTFYAISNDESKFNLNGIYLHSESIDNKNYIKFVST 177

Query: 177 DGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           DGHRL++ +++   +I     +I P+K + E+ +I+  ++  +K+S+ ++   +NI+  +
Sbjct: 178 DGHRLSLMQIESDTKILDQKGVIFPKKGLAELRKIIDQENQDIKISILDNNAVINIKETT 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RLIDG+FP+Y+ VIP  +D   ++N   L   + R+S++++ + + + +    +++ 
Sbjct: 238 LVMRLIDGDFPDYKRVIPEMSDNYCQINGEILLHTLRRISLLANEKSKGINIEFLQNEIN 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           +T  NP+ G A E++   Y    + I FN KYL+++I N     VVD ++   +  + S 
Sbjct: 298 VTSSNPEYGDASETIKTIYEGNNVKIGFNSKYLIDVISN-----VVDKDIRIYIKDNMSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
             I  +D           N   V+MPMRI
Sbjct: 353 CLILPED---------TNNYLAVIMPMRI 372


>gi|16272930|ref|NP_439155.1| DNA polymerase III subunit beta [Haemophilus influenzae Rd KW20]
 gi|260580083|ref|ZP_05847913.1| DNA polymerase III, beta subunit [Haemophilus influenzae RdAW]
 gi|1169393|sp|P43744|DPO3B_HAEIN RecName: Full=DNA polymerase III subunit beta
 gi|1574022|gb|AAC22654.1| DNA polymerase III, beta subunit (dnaN) [Haemophilus influenzae Rd
           KW20]
 gi|260093367|gb|EEW77300.1| DNA polymerase III, beta subunit [Haemophilus influenzae RdAW]
          Length = 366

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ R ++L+ L   C ++  +  IPV  +VLLQ  D  L I  +  E+E++     S
Sbjct: 1   MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDYRLTITGTDLEVELSSQTQLS 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ T+ A    DI R L D ++I+   E +      +  G S F L + P  E+P
Sbjct: 61  SSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQD---RALVQSGRSRFTLATQPAEEYP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    FEL  + L+ L+E T F+MA ++ RY+LNG+ F        L  VATDGH
Sbjct: 118 NLTDWQSEVDFELPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN--LLRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + +  ++    S+I+PRK V E++R+L + D   ++ +  + + +++++   + 
Sbjct: 176 RLAVCTISLEQELQNH-SVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +LIDG FP+Y+ V+P +  K +  N   L+QA  R SI+S+ R ++V+LSL  ++L +T 
Sbjct: 235 KLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFARASILSNERARSVRLSLKENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N +  +A E ++V YN   +++ FN  Y+L++++ +  +     +V   L  + SS  I
Sbjct: 295 SNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCN-----QVRMCLTDAFSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +  S           YV+MPMR+
Sbjct: 350 ENCEDSSCE---------YVIMPMRL 366


>gi|225873788|ref|YP_002755247.1| DNA polymerase III, beta subunit [Acidobacterium capsulatum ATCC
           51196]
 gi|225791219|gb|ACO31309.1| DNA polymerase III, beta subunit [Acidobacterium capsulatum ATCC
           51196]
          Length = 373

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 112/388 (28%), Positives = 189/388 (48%), Gaps = 18/388 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I+V R D+L  L  +  ++ERK TIP+  + L++A++  L I A+  +  +  +  A 
Sbjct: 1   MEISVSRQDLLRELTASQSVVERKTTIPILSNFLIEADEDRLAITATDLDQSMRTSCAAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   GS T+ A  LYD V+ L +G       +      V I  G SN  +     + FP 
Sbjct: 61  VKKPGSCTIPARKLYDYVKLLPEGDVSIKLMD---NHWVQIRSGRSNTKMVGMARANFPQ 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E     +  +  + L+NL+ +T FA++ EE RY LNG    +  E   +  VATDGHR
Sbjct: 118 VPEFPSTGAIAIPVASLRNLIAKTIFAISNEESRYTLNGALLILKAE--SIAMVATDGHR 175

Query: 181 LAVAEVDIVA--QIAKMPSIIVPRKAVGEILRILSSKD-SSVKVSLSESRIHLNIESLSM 237
           LA  E        +      ++PRKA+ E+  +L + D  SV+ +  +S +   I    +
Sbjct: 176 LAHIEKSGENFPSMGAEKKTLIPRKALSELQSLLGNTDAESVEFADDDSTLFFRIGHRVL 235

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + R + G+FPNY+ V+P  N+K   V   +L +++   S  +  R  A+K+ L  ++L +
Sbjct: 236 TSRKLTGQFPNYEAVLPRDNNKFAIVRSEDLSRSIQLTSQFADERSGAIKIRLEQNELKI 295

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +  + D G++ + +   Y+  P+ + FN  YLL+ +  I        EV      + S+ 
Sbjct: 296 SASSTDSGESEDVIETPYSFDPLVVGFNSAYLLDFLKAIG----NTGEVRLEFKDAQSAG 351

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +R +D              Y++MPMRI
Sbjct: 352 QMRPED------GQEDYKYRYIIMPMRI 373


>gi|296285052|ref|ZP_06863050.1| DNA polymerase III subunit beta [Citromicrobium bathyomarinum
           JL354]
          Length = 375

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 155/392 (39%), Positives = 229/392 (58%), Gaps = 24/392 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQAN-DGLLEIKASGPEIEITGAI-P 58
           MK T+ER+ +L  L H   ++ER+NTIP+  +VL+ A+  G +++ A+  ++++   +  
Sbjct: 1   MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIDADAGGGVKVMATDLDLQVVETMTA 60

Query: 59  ASVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
           ASV+  G+ITVSAHLL+DI RKL DG+Q+S          + +  G S F L + P  +F
Sbjct: 61  ASVESAGAITVSAHLLFDIARKLPDGSQVSLET---ADNRMVVKAGRSRFQLPTLPRDDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKL-CAVATD 177
           P   E E   SFEL +  L  +++RT FA++TEE RYYLNGIF H+++E   +  A ATD
Sbjct: 118 PVIVEGELPTSFELPARELAEMIDRTRFAISTEETRYYLNGIFLHVSDEARPVLKAAATD 177

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIES-- 234
           GHRLA   +D       MP +IVPRKAVGE+ ++L    DS+V++ LS S+I   +    
Sbjct: 178 GHRLARYTLDRPEGAEGMPDVIVPRKAVGELRKLLEEALDSNVQIDLSASKIRFALGGEG 237

Query: 235 -LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSD 293
            + ++ +LIDG FP+Y  VIP  NDK LR++     Q VDRV+ +++ + +AVK+ L  D
Sbjct: 238 GVVLTSKLIDGTFPDYSRVIPTGNDKLLRLDPKAFFQGVDRVATIATEKTRAVKMGLDED 297

Query: 294 KLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSS 353
           K+ ++V +PD G A E +   Y     +I FN  YL +I+  I S     D V   L  +
Sbjct: 298 KVTLSVTSPDNGTAAEEIAAEYKAEGFEIGFNANYLKDILGQIDS-----DTVELHLADA 352

Query: 354 NSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +   IR         +D    A YVLMPMR+
Sbjct: 353 GAPTLIR---------RDENSPALYVLMPMRV 375


>gi|219871633|ref|YP_002476008.1| DNA polymerase III subunit beta [Haemophilus parasuis SH0165]
 gi|219691837|gb|ACL33060.1| DNA polymerase III subunit beta [Haemophilus parasuis SH0165]
          Length = 367

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 207/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLTSRPTLPVINNILLEIEGSRLSLTGTDLEVELTTQAELF 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +V   G  T+ A    DI R L D + IS   + +    V I    S F L + P S++
Sbjct: 61  EAVSFSGKFTIPAKKFLDICRSLPDDSVISVQFDED---RVFIRADRSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           PS  + +    F +  + L  L+E T F+MA ++ RY+LNG+ F        L +VATDG
Sbjct: 118 PSLMDWKPEVDFTIEQATLARLIEATQFSMANQDARYFLNGMKFETEGN--LLRSVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E++R++   + SV++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELVRLVGHNNESVRLEIGTSNLRVSMNGIVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L  +   L+ A+ R +I+S+ R + V+L+L+ + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEADAEVLKHALVRAAILSNERFRGVRLALNQNLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +         V   L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVSYQSAEMEVGFNVSYLLDVLNTLKCQ-----RVRISLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNATAE---------YVIMPMRL 367


>gi|73539708|ref|YP_294228.1| DNA polymerase III subunit beta [Ralstonia eutropha JMP134]
 gi|72117121|gb|AAZ59384.1| DNA polymerase III, beta subunit [Ralstonia eutropha JMP134]
          Length = 371

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 119/391 (30%), Positives = 205/391 (52%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++ +   +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLIRKSGSNVSFLSTDIEIQITTHAEC 60

Query: 60  SV-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V +   + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGNDSVATTVAARKLLDILRAMPDGDVALSLNDK----RMTVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  E+  S  L     K+L+   HFAMA ++IRYYLNG+      +  K+ AVATD
Sbjct: 117 PTVAEASEFNASVSLPQKTFKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKKVMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAK---MPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V++  +         +I+PRK + E+ R+L   D  V+V L+ +++  +  +
Sbjct: 175 GHRLAYCGVELENEATGVGSRQEVIIPRKTILELQRLLEDNDDPVQVQLAANQVKFSFAN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++   L+QA+ R +I+++ + + V+  L +  
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYKNAFAIDRVRLQQALQRTAILTTDKFKGVRCILDTHM 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y+   +DI FN  YLL+++ N+ S     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYSGDALDIGFNVTYLLDVLANLKS-----EQVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   + D         N  YV+MPMRI
Sbjct: 350 SSALITVPEDD---------NFKYVVMPMRI 371


>gi|167854884|ref|ZP_02477660.1| DNA polymerase III subunit beta [Haemophilus parasuis 29755]
 gi|167853951|gb|EDS25189.1| DNA polymerase III subunit beta [Haemophilus parasuis 29755]
          Length = 367

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 208/387 (53%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+ T+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQFTITREQLLKPLQQVCGVLTSRPTLPVINNILLEIEGSRLSLTGTDLEVELTTQAELF 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +V   G  T+ A    DI R L D + IS   + +    V I    S F L + P S++
Sbjct: 61  EAVSFSGKFTIPAKKFLDICRSLPDDSVISVQFDED---RVFIRADRSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           PS  + +    F +  + L  L+E T F+MA ++ RY+LNG+ F        L +VATDG
Sbjct: 118 PSLMDWKPEVDFTIEQATLARLIEATQFSMANQDARYFLNGMKFETEGN--LLRSVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E++R++   + SV++ +  S + +++  +  +
Sbjct: 176 HRLAVCTMALNQELL-THSVIVPRKAVLELVRLVGHNNESVRLEIGTSNLRVSMNGIVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L  +   L++A+ R +I+S+ R + V+L+L+ + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEADAEVLKRALVRAAILSNERFRGVRLALNQNLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M++ FN  YLL++++ +         V   L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVSYQSAEMEVGFNVSYLLDVLNTLKCQ-----RVRISLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  +           YV+MPMR+
Sbjct: 350 IEDCDNATAE---------YVIMPMRL 367


>gi|147676337|ref|YP_001210552.1| DNA polymerase sliding clamp subunit [Pelotomaculum
           thermopropionicum SI]
 gi|146272434|dbj|BAF58183.1| DNA polymerase sliding clamp subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 369

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 100/386 (25%), Positives = 184/386 (47%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI  +R ++   L    R +  KN +P+   +  +A D  L + A+  E+ I  +I A 
Sbjct: 1   MKIISDRENLFNALQVVQRAVSVKNPLPILSGIKFEAEDDRLFLTATDLEMGIRCSITAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+  + A  + +++RKL D       + ++    V I +  S   +  F   E+P 
Sbjct: 61  VLQPGAAVLPARYITELIRKLPDQP--FLIESDQDTGHVTIRYASSEASMNCFQADEYPE 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               E    F + +  ++ ++ +  FA+ ++E R    G+ F + E   ++  VATD HR
Sbjct: 119 FPVPEGKIEFTVPADTVREVIRQVIFAVGSDENRPVFTGVLFEVREG--QVQVVATDTHR 176

Query: 181 LAVAEVDIVAQIAK-MPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           LA  + D+  +I+    ++I+P +++ E+ RI   +D  VKV+ +ES++   +   S+  
Sbjct: 177 LAWRKFDLEERISGADINLIIPGRSLNELARIAGGQDGRVKVTAAESQVLFTVGETSLIT 236

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           RLI G FPNY+ VIP      +R    +L +A +R S++S     AV+L    + + +T 
Sbjct: 237 RLIGGNFPNYRQVIPQEFVSRIRAKTKDLAEATERASLLSKDGAPAVRLDAGGNVMVVTA 296

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N ++G+  E + V     P+ I FN +YL +++  + S     +E+        S   I
Sbjct: 297 -NSEVGRVREELAVQQEGEPVQIAFNARYLSDVLKVVGS-----EEIDIEFTGPLSPGVI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           R              +   +L+P+R+
Sbjct: 351 RPV---------GSTDYLSLLLPVRL 367


>gi|330814958|ref|YP_004358663.1| DNA polymerase III, beta subunit [Burkholderia gladioli BSR3]
 gi|327367351|gb|AEA58707.1| DNA polymerase III, beta subunit [Burkholderia gladioli BSR3]
          Length = 368

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 108/388 (27%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+      +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKTGSDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGEQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +VK+ +++++       + +
Sbjct: 175 GHRLAYSSMKIEGGAFPRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFTIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D +   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDNIEVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|119947309|ref|YP_944989.1| DNA polymerase III, beta subunit [Psychromonas ingrahamii 37]
 gi|119865913|gb|ABM05390.1| DNA polymerase III, beta subunit [Psychromonas ingrahamii 37]
          Length = 367

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 122/387 (31%), Positives = 212/387 (54%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHA-CRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M  ++ R   L  L      +   +  +P+  ++L++  D  L +  +  E+E+   I  
Sbjct: 1   MHFSISREAFLRPLQLVVSSVAGGRPALPIMANILIEVKDNQLSLTGTDLEVELIAVIAL 60

Query: 60  SV-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
                 G ITV A  L DI R L +  +I F  + E   +V I  G S + L S P  +F
Sbjct: 61  ENPSENGVITVPARKLLDICRGLSEPCEIKFQVKEE---KVTIRSGRSRYLLSSLPAVDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+ +  + +    +  +  K L+E T FAMA++++RYYLNG++F  +E    L +VATDG
Sbjct: 118 PNIESWQSLVELTVPQAEFKKLIEFTQFAMASQDVRYYLNGMYFEASE--QTLRSVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA   + +  Q+ +  S+IVPRK V E++++L +  ++V + + ++ +   I+    +
Sbjct: 176 HRLASCSIKLN-QVIEQQSVIVPRKGVIELVKLLDNDQANVTIQIGQNNLRAVIDGFIFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +L+DG FP+Y+ VIP + DKEL  N  +L+QA  R +I+S+ + + V+L LS + L +T
Sbjct: 235 TKLVDGRFPDYRRVIPKNGDKELISNRESLKQAFSRAAILSNEKFRGVRLILSENLLQIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y+   ++I FN  Y+L++++ + S     ++V     +S+ S  
Sbjct: 295 ANNPEREEAEEYIDVDYHSANLEIGFNVSYVLDVLNTLKS-----EQVKITFSNSDHSAL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D D         ++ YVLMPMR+
Sbjct: 350 IESIDSD---------DSLYVLMPMRL 367


>gi|126668222|ref|ZP_01739183.1| DNA polymerase III, beta subunit [Marinobacter sp. ELB17]
 gi|126627371|gb|EAZ98007.1| DNA polymerase III, beta subunit [Marinobacter sp. ELB17]
          Length = 351

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 118/369 (31%), Positives = 200/369 (54%), Gaps = 20/369 (5%)

Query: 18  CRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAI-PASVDVCGSITVSAHLLYD 76
             ++E+K T+PV  +VLL A D  L +  +  E+E+   I P  +D  G ITV A  L D
Sbjct: 2   AGVVEKKQTMPVLSNVLLVAEDNTLTLTGTNMEVELVARITPVHIDQPGRITVPARKLAD 61

Query: 77  IVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTKEEEYVYSFELASSV 136
           I R L + + I     ++ G  +++  G S+F L + P   FP+ ++E   +  EL    
Sbjct: 62  ICRALGEESPIEL---DQQGDRLHLRCGKSHFTLATLPAEHFPNVEDEAESFRLELPQKE 118

Query: 137 LKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMP 196
           L+ + + T FAMA +++RYYLNG+   +  +   +  VATDGHRLA+A  D+     +  
Sbjct: 119 LRRMFDSTAFAMAQQDVRYYLNGLLLEVAADH--VRTVATDGHRLAMAHQDVETGCPEAR 176

Query: 197 SIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDGEFPNYQNVIPCS 256
            +IVPRK V E+ R+L   D+ V + + ++ +   + S + + +LI+G+FP+Y  VIP  
Sbjct: 177 QVIVPRKGVLELARLLDDVDTPVTLVIGDNHLRATVGSYTFTSKLIEGKFPDYNRVIPRG 236

Query: 257 NDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNVYYN 316
            DK +  +   L+  + R  I+S   I+ V+L+L++++L +  +NPD  +A +++ V Y 
Sbjct: 237 GDKVVLADRITLKNTLQRAGILSHENIRGVRLNLAANELQVFANNPDQEQAEDALPVDYQ 296

Query: 317 ECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNA 376
              + I FN  YL+++++ +      DD+V   L + NSS  I  +              
Sbjct: 297 GETLQIGFNVGYLIDVMNALD-----DDQVKVTLSNPNSSALIESQTD---------ARC 342

Query: 377 FYVLMPMRI 385
            YV+MPMR+
Sbjct: 343 LYVVMPMRL 351


>gi|254363201|ref|ZP_04979250.1| DNA-directed DNA polymerase III beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153095095|gb|EDN75646.1| DNA-directed DNA polymerase III beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 367

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 124/387 (32%), Positives = 212/387 (54%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+IT+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 1   MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSLTGTDLEVELTTQAQLL 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +VD  G  T+ A    DI + L D + IS   E +   +  I  G S F L + P S++
Sbjct: 61  QAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEED---KAIIKAGRSKFSLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++S D +V++ +  S I + +  +  +
Sbjct: 176 HRLAVCTMVLNQELL-THSVIVPRKAVLELSRLVASNDETVRLEIGSSNIRITMNGIVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS++ L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSNEKFRGVRLTLSNNLLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y+   M++ FN  Y+L++++ +         V F L  S+SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKCQ-----RVRFSLVDSSSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  S           YV+MPMR+
Sbjct: 350 IEDCDNSSAE---------YVIMPMRL 367


>gi|217968467|ref|YP_002353701.1| DNA polymerase III subunit beta [Thauera sp. MZ1T]
 gi|217505794|gb|ACK52805.1| DNA polymerase III, beta subunit [Thauera sp. MZ1T]
          Length = 369

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 199/385 (51%), Gaps = 21/385 (5%)

Query: 3   ITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVD 62
           +T  R  +L  L     I+E+++T+P+  +VL++ +   L + A+  EI+I       + 
Sbjct: 4   LTTTRDALLAPLQSVAGIVEKRHTLPILSNVLIEKHADQLTMLATDIEIQIRTTTGGHIG 63

Query: 63  -VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS- 120
               SITV A  L DI+R L D A+IS   +++    + +  G S F LQ+ P +++P  
Sbjct: 64  GEDASITVGARKLQDILRALPDSAEISLTLDDK---RLTVKAGRSRFQLQTLPAADYPRL 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               +      +     K  + +  +AMA ++IRYYLNG+    +    +L  VATDGHR
Sbjct: 121 NPPTDAAAHLSIGQRTFKRQLAQVAYAMAQQDIRYYLNGLLLIADGG--ELRMVATDGHR 178

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA A  D+ A IA     I+PRK V E+ R L+  D  +++ L+ ++       + +  +
Sbjct: 179 LAYAASDLEAPIATRTEAILPRKTVLELARQLADSDDPLEILLAGNQAVFRFGPIELVTK 238

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG+FP+Y+ VIP ++ K +      L  A+ R +I+++ + + V++ L    L +   
Sbjct: 239 LIDGKFPDYERVIPTAHPKLIHFARQPLLSALQRAAILTNEKFRGVRMVLEDGVLRIAST 298

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N +  +A++ + + Y    +DI FN  YLL++++N+SS     + V +R +  NSS  I 
Sbjct: 299 NAEQEEAMDELEIDYQGDKLDIGFNVTYLLDVLNNLSS-----ETVDWRFNDGNSSALIT 353

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
               D            YV+MPMRI
Sbjct: 354 LPGND---------KFKYVVMPMRI 369


>gi|254447344|ref|ZP_05060810.1| DNA polymerase III, beta subunit [gamma proteobacterium HTCC5015]
 gi|198262687|gb|EDY86966.1| DNA polymerase III, beta subunit [gamma proteobacterium HTCC5015]
          Length = 366

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 214/385 (55%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+ + R  +L  L      +ERKNT+P   +VL++A  G +++ A+  EIE+       
Sbjct: 1   MKLHLSRESLLTPLQKVIGAVERKNTMPALGNVLIKAQGGEIQMTATDLEIELLAKSVLP 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           VD  G IT+ A  L DI + L DGA I+   + E      +S G S F L + P ++FP 
Sbjct: 61  VDQEGDITLPARKLLDICKNLPDGADITLQVDAE---RATLSSGRSRFKLSTLPAADFPQ 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +  + V  F L  S L+ ++++T FAMA +++RYYLNG+      +   + AVATDGHR
Sbjct: 118 LEAVQGVTQFTLPQSTLRKVIDKTSFAMAQQDVRYYLNGLMLE--LDGSTVRAVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ E D    I     +I+PRK V E+ R+L  ++   +VSLS + I +++ +L  + +
Sbjct: 176 LALCETDAGLDIGDKKQVIIPRKGVQELSRLLDDEERDAEVSLSNNHIQVDLGNLRFTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+YQ V+P + DK +  +  +L+ A+ R S++S+ + + V+L   +  L +  +
Sbjct: 236 LIDGRFPDYQRVMPANCDKVVSADKQDLKLALTRTSVLSNEKYKGVRLVADNGALTIQTN 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A E + V Y    M+I FN  Y+L++++N+      ++ V   L  +NSS  + 
Sbjct: 296 NPEQEEAEEQLEVQYQGENMEIGFNVNYMLDVLNNL-----TEELVTIALKDANSSCLVE 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                    +  +  A YV+MPMR+
Sbjct: 351 ---------EVGEQTAKYVIMPMRL 366


>gi|33151999|ref|NP_873352.1| DNA polymerase III subunit beta [Haemophilus ducreyi 35000HP]
 gi|33148221|gb|AAP95741.1| DNA polymerase III beta chain [Haemophilus ducreyi 35000HP]
          Length = 367

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 121/387 (31%), Positives = 205/387 (52%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T+ R  +L+ L   C ++  + T+PV  ++LL  N   L +  +  E+E+T      
Sbjct: 1   MQLTITREQLLKPLQQVCGVLSSRPTLPVINNILLDINGSRLSLTGTDLEVELTTQAELE 60

Query: 61  --VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
             VD  G  T+ A    DI R L + + IS   E +      I    S F L + P S++
Sbjct: 61  QAVDFSGKFTLPAKKWLDICRSLPENSLISIQFEQD---RALIRADRSKFNLATLPASDY 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 118 PNLMDWKPEVDFSMEQSTLSRLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 175

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ RILS     V++ +  + + +++  +  +
Sbjct: 176 HRLAVCTMALSQELT-THSVIVPRKAVLELSRILSMTADPVRLEIGTNNLRISMNGVVFT 234

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ +   V+L+LS + L +T
Sbjct: 235 SKLIDGRFPDYRRVLPRNADRILEAETEMLKRALMRAAILSNEKFHGVRLALSENMLKIT 294

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y    M+I FN  YLL++++ +       + V F L  ++SS  
Sbjct: 295 ANNPEQEEAEEIIDVAYQNTAMEIGFNVSYLLDVLNTLKC-----ERVRFNLVDASSSCL 349

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   +  +           YV+MPMR+
Sbjct: 350 IEDCENSTAE---------YVIMPMRL 367


>gi|85708877|ref|ZP_01039943.1| DNA polymerase III beta subunit [Erythrobacter sp. NAP1]
 gi|85690411|gb|EAQ30414.1| DNA polymerase III beta subunit [Erythrobacter sp. NAP1]
          Length = 375

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 148/392 (37%), Positives = 226/392 (57%), Gaps = 24/392 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGL-LEIKASGPEIEITGAIPA 59
           MK T+ER+ +L  L H   ++ER+NTIP+  +VL+ A+DG  +++ A+  ++++   + A
Sbjct: 1   MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIDASDGGSVKVMATDLDLQVVETMNA 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
           S V+  G+ITVSAHLL+DI RKL DGAQ+S          + +  G + F L + P  +F
Sbjct: 61  SSVESPGAITVSAHLLFDIARKLPDGAQVSLETAEN---RMEVKAGRARFKLPTLPRDDF 117

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATD 177
           P   E +   SFE+ +  L  +++ T FA++TEE RYYLNGIF H  +E++  L A ATD
Sbjct: 118 PVIVEGDLPTSFEIPARTLAQMIDATRFAISTEETRYYLNGIFLHVTDEDEPVLKAAATD 177

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIES-- 234
           GHRLA   +        MP +IVPRKAV E+ ++L    D +V+V LS S+I   +    
Sbjct: 178 GHRLARFTLARPDGAEGMPDVIVPRKAVAELRKLLEEALDGAVQVDLSASKIRFTLGGEG 237

Query: 235 -LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSD 293
            + ++ +LIDG FP+Y  VIP  NDK L+V+     + VDRV+ +++ + +AVK+ L +D
Sbjct: 238 GVVLTSKLIDGTFPDYSRVIPTGNDKLLKVDPKLFFEGVDRVATIATEKTRAVKMGLDAD 297

Query: 294 KLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSS 353
           K+ ++V +PD G A E +   Y     +I FN  YL +I+    +     +E+   L  +
Sbjct: 298 KVTLSVTSPDNGNAAEELMADYKSDGFEIGFNANYLKDILGQFDA-----EEIELHLADA 352

Query: 354 NSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +   IR  D            A YVLMPMR+
Sbjct: 353 GAPTLIRESDTSP---------ALYVLMPMRV 375


>gi|237747156|ref|ZP_04577636.1| DNA polymerase III subunit beta [Oxalobacter formigenes HOxBLS]
 gi|229378507|gb|EEO28598.1| DNA polymerase III subunit beta [Oxalobacter formigenes HOxBLS]
          Length = 368

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 115/388 (29%), Positives = 209/388 (53%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++     +   ++  EI+I      
Sbjct: 1   MQLVKTGRDNLLRPLQIVSGIVERRHTLPILANILIRKEGNAVSFLSTDTEIQIVTHAEI 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            + +   + TV+A  L DI+R L D A+I+    ++    + +S G S F LQ+ P ++F
Sbjct: 61  GTAEEDATTTVAARKLLDILRALPDSAEIAISLNDK---RLVVSAGKSRFSLQTLPAADF 117

Query: 119 PSTKEE-EYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  +  EY  S  L+   LKNL+   +FAMA ++IRYYLNG+          + AVATD
Sbjct: 118 PTVSQPLEYQTSVTLSQKSLKNLLGMVYFAMAQQDIRYYLNGLLLQTGGN--TIKAVATD 175

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +++   + +    +I+PRK + E+ R+L   +  V++ +S +++      + +
Sbjct: 176 GHRLAFCQMETEQEFSNN-DVIIPRKTILELQRLLEESEEPVRIDISGAQVRFVFGDVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP+Y  VIP     +  ++   L++A+ R +IM+S + + ++  L+   L +
Sbjct: 235 ISKLVEGKFPDYTRVIPKGYKNKFTISRELLQRALQRAAIMTSDKFKGIRCILAPGSLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +  N D  +AIE + + Y+   +DI FN  YLL+++ N+      +DE+   L  +NSS 
Sbjct: 295 SSTNADQEEAIEEIELDYDGDNIDIGFNVTYLLDVLGNLK-----NDEISIELGDANSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +   D           +  YV+MPMRI
Sbjct: 350 LMSVPDN---------TDFKYVVMPMRI 368


>gi|134093296|ref|YP_001098371.1| DNA polymerase III subunit beta [Herminiimonas arsenicoxydans]
 gi|133737199|emb|CAL60242.1| DNA polymerase III, beta subunit [Herminiimonas arsenicoxydans]
          Length = 368

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 114/388 (29%), Positives = 197/388 (50%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   +R  +L  L     I+ER++T+P+  ++L++ +   +   ++  E++IT     
Sbjct: 1   MQLVKTQRDALLRPLQIVSGIVERRHTLPILANILIRKDGERVSFLSTDIEVQITTHAQV 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            S +   S TV+A  L DI+R L D   +S          + +  G S F LQ+    EF
Sbjct: 61  GSGNEIASTTVAARKLLDILRALPDSGDVSLTL---ANKRMTVQSGKSRFALQTLAAEEF 117

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + E+Y     L    LK+L    HF+MA ++IRYYLNG+      +   + AVATD
Sbjct: 118 PTVAQAEQYNAKVTLPQKTLKHLFNMVHFSMAQQDIRYYLNGLLLV--VDGKNVIAVATD 175

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +V    + A    +I+PRK + E+ R+L   D  V + ++ S++ L    + +
Sbjct: 176 GHRLAFCQVATEQEFA-RQEVIIPRKTIIELQRLLEDTDQPVDLEIANSQVKLTFGDIEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP+Y  V+P        +    L +++ R +IM+S + + V+  +S   + +
Sbjct: 235 ISKLVEGKFPDYTRVVPKGYKNNFTIGRDALLRSLQRAAIMTSDKFKGVRCIMSPGSMKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +  N D  +A+E + + Y    +DI FN  YLL++++N+       D +   L  +NSS 
Sbjct: 295 SSTNADQEEAVEEIEIDYGGDSVDIGFNVTYLLDVLNNLKG-----DNINIALGDANSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   D           +  YV+MPMRI
Sbjct: 350 LITVPDN---------PDFKYVVMPMRI 368


>gi|322417547|ref|YP_004196770.1| DNA polymerase III subunit beta [Geobacter sp. M18]
 gi|320123934|gb|ADW11494.1| DNA polymerase III, beta subunit [Geobacter sp. M18]
          Length = 372

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 203/389 (52%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  + +   ++ L     I+E++NT+P+  + LL+  +  L I A+  E+ +  + P  
Sbjct: 1   MEFRISKEIFMKALQRIQGIVEKRNTMPILSNALLEVQNDQLYITATDLEVGMKSSYPTK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G ITVSA  LY+IV+++ D   +   K+N+    V I+ G + F +      EFP 
Sbjct: 61  VIREGKITVSAKKLYEIVKEMPDEEILFSTKDNDW---VEITCGKARFNIVGLSSEEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
             + +        + +L +++E+T +A+  +E +Y LNG+F           L  VATDG
Sbjct: 118 FPKVKEENFLVFKNEILADMIEKTSYAICYDETKYNLNGVFIKAFDENGGNVLKMVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPS--IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL+VA+  I   I    S  II P+K + E+ +++  +D  + +   ++   +   +  
Sbjct: 178 HRLSVAQKAITGNITAELSKGIIFPKKGIFELKKMVEEEDGEIMLGFMDNSAVIKKGNTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RLIDGEFP+Y  VIP +ND+ +++N      ++ R+SI+SS + + VK+ ++ + + 
Sbjct: 238 VVMRLIDGEFPDYTKVIPVANDRIVQINRDKFLHSLKRMSILSSEKFKGVKIDVNPELVI 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G+A E + + Y+   +   FN KYL++++  +        EV  +L    S 
Sbjct: 298 ISSSNPELGEAREEIEIDYDGNGISARFNAKYLIDVLSVMEQR-----EVELKLKDELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           V ++  D +             V+MPMR+
Sbjct: 353 VIMKAADSEE---------FLAVIMPMRL 372


>gi|223935962|ref|ZP_03627876.1| DNA polymerase III, beta subunit [bacterium Ellin514]
 gi|223895184|gb|EEF61631.1| DNA polymerase III, beta subunit [bacterium Ellin514]
          Length = 369

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 108/390 (27%), Positives = 196/390 (50%), Gaps = 27/390 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M +T+ +  ++  L     ++  + T+P+  +VL++A    LE  A+  ++ I+  + A+
Sbjct: 1   MNLTISKEQLINGLQAVQNVVSTRTTLPILSNVLIRAEGNRLEFTATDLDVTISCGVEAA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G+ TV    L+ IVR+L +        E +     +I  G S + +      EFP 
Sbjct: 61  VKEGGATTVPVKKLFGIVRELNNPE---IEIEVDEKNTCSIRSGSSFYKINGLSADEFPP 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             + +      L    +K ++++T FA++T+E RY LNGIF   + ++ KL  VATDG R
Sbjct: 118 LPKFKEDKKVTLPQEKVKGMMKKTSFAISTDESRYVLNGIFI--SLKEHKLTMVATDGRR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES-----L 235
           LA+ + ++          IVP KAV E+ R+L+     V++  SE++    ++      +
Sbjct: 176 LALVDEEVDVTEKSQGEFIVPAKAVNELNRLLT-DKGEVEIRYSENQAAFTLKDEKGFSI 234

Query: 236 SMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKL 295
            +  +LI+G +PNY+ VIP    + + +       A+ R  IM+S +  +VKL+ S + L
Sbjct: 235 LIISKLIEGNYPNYRQVIPGEAKERIALVREEFLHALKRAEIMTSEKSNSVKLTFSKNNL 294

Query: 296 CMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
            +T ++P++G+A ES+ + Y    M I FN KY+++ ++ +S     +DE+   L    S
Sbjct: 295 AITANSPEVGEARESLAINYKGKEMAIAFNPKYVIDPLNALS-----NDEIFLELIDELS 349

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              ++                 YV+MPMR+
Sbjct: 350 PGVVKINGP-----------FLYVVMPMRL 368


>gi|261493281|ref|ZP_05989808.1| DNA-directed DNA polymerase III beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261496475|ref|ZP_05992855.1| DNA-directed DNA polymerase III beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261307678|gb|EEY09001.1| DNA-directed DNA polymerase III beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261311131|gb|EEY12307.1| DNA-directed DNA polymerase III beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 369

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 124/387 (32%), Positives = 212/387 (54%), Gaps = 22/387 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+IT+ R  +L+ L   C ++  + T+PV  ++LL+     L +  +  E+E+T      
Sbjct: 3   MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSLTGTDLEVELTTQAQLL 62

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            +VD  G  T+ A    DI + L D + IS   E +   +  I  G S F L + P S++
Sbjct: 63  QAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEED---KAIIKAGRSKFSLATLPASDY 119

Query: 119 PSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDG 178
           P+  + +    F +  S L  L++ T F+MA ++ RY+LNG+ F        L  VATDG
Sbjct: 120 PNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMKFETEGN--LLRTVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLAV  + +  ++    S+IVPRKAV E+ R+++S D +V++ +  S I + +  +  +
Sbjct: 178 HRLAVCTMVLNQELL-THSVIVPRKAVLELSRLVASNDETVRLEIGSSNIRITMNGIVFT 236

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y+ V+P + D+ L      L++A+ R +I+S+ + + V+L+LS++ L +T
Sbjct: 237 SKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSNEKFRGVRLTLSNNLLKIT 296

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
            +NP+  +A E ++V Y+   M++ FN  Y+L++++ +         V F L  S+SS  
Sbjct: 297 ANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKCQ-----RVRFSLVDSSSSCL 351

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I   D  S           YV+MPMR+
Sbjct: 352 IEDCDNSSAE---------YVIMPMRL 369


>gi|152980594|ref|YP_001351692.1| DNA polymerase III subunit beta [Janthinobacterium sp. Marseille]
 gi|151280671|gb|ABR89081.1| DNA polymerase III beta subunit [Janthinobacterium sp. Marseille]
          Length = 368

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 112/388 (28%), Positives = 196/388 (50%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   +R  +L  L     I+ER++T+P+  ++L++ +   +   ++  E++IT     
Sbjct: 1   MQLVKTQRDALLRPLQIVSGIVERRHTLPILANILIRKDGERVSFLSTDIEVQITTHAQV 60

Query: 60  -SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            S +   S TV+A  L DI+R L D   +S          + +  G S F LQ+    EF
Sbjct: 61  GSGNDVASTTVAARKLLDILRALPDSGDVSLTL---ANKRMTVQSGKSRFALQTLAAEEF 117

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + E+Y     L    LK+L    HF+MA ++IRYYLNG+      +   + AVATD
Sbjct: 118 PTVAQAEQYNAKVTLPQKTLKHLFNMVHFSMAQQDIRYYLNGLLLV--VDGKNVIAVATD 175

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA  +V    +      +I+PRK + E+ R+L   D  V + ++ +++ L    + +
Sbjct: 176 GHRLAFCQVATEQEFP-RQEVIIPRKTIIELQRLLEENDQPVDLEIANNQVKLTFGDIEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP+Y  V+P        +    L +++ R +IM+S + + V+  +S   + +
Sbjct: 235 ISKLVEGKFPDYTRVVPKGYKNNFTIGRDALLRSLQRAAIMTSDKFKGVRCIMSPGSMKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           +  N D  +A+E + + Y    +DI FN  YLL++++N+       D +   L  +NSS 
Sbjct: 295 SSTNADQEEAVEEIEIDYGGDSVDIGFNVTYLLDVLNNLKG-----DSINIALGDANSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   D           +  YV+MPMRI
Sbjct: 350 LITVPDN---------PDFKYVVMPMRI 368


>gi|148980123|ref|ZP_01815903.1| DNA polymerase III subunit beta [Vibrionales bacterium SWAT-3]
 gi|145961424|gb|EDK26730.1| DNA polymerase III subunit beta [Vibrionales bacterium SWAT-3]
          Length = 356

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 111/376 (29%), Positives = 206/376 (54%), Gaps = 21/376 (5%)

Query: 11  LELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVD-VCGSITV 69
           ++ L      +  + T+P+  ++L++  D +L + A+  E+E+   +    D   GSITV
Sbjct: 1   MKPLQQVSGALGGRPTLPILGNLLIKVEDNVLSMTATDLEVELISRVTLEGDFEAGSITV 60

Query: 70  SAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTKEEEYVYS 129
            +    DI R L D + I+   +   G  V +  G S F L + P ++FP+ ++      
Sbjct: 61  PSRKFLDICRGLPDSSVITVVLD---GDRVQVRSGRSRFSLATLPAADFPNIEDWSSEVE 117

Query: 130 FELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIV 189
             +  + L+ L+E+T F+MA +++RYYLNG+ F I  E   L +VATDGHR+AV++  + 
Sbjct: 118 VSVTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--EGSTLRSVATDGHRMAVSQAQLG 175

Query: 190 AQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDGEFPNY 249
           A  A+   IIVPRK V E++++L + +  V + +  S +   + +   + +L+DG FP+Y
Sbjct: 176 ADFAQ-KQIIVPRKGVQELVKLLDAPEQPVTLQIGNSNVRAEVNNYVFTSKLVDGRFPDY 234

Query: 250 QNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIE 309
           + V+P +  K L   C  LR A  R +I+S+ + + V+++L+  ++ +T +NP+  +A E
Sbjct: 235 RRVMPQNTTKTLEAGCDELRSAFSRAAILSNEKFRGVRVNLADSEMRITANNPEQEEAEE 294

Query: 310 SMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNN 369
            ++V +    ++I FN  Y+L++++ +       ++V   +  +N+S  I     DS   
Sbjct: 295 MLDVTFEGDALEIGFNVSYVLDVLNTLRC-----EQVRISMSDANASALIENAQDDS--- 346

Query: 370 KDNKVNAFYVLMPMRI 385
                 A YV+MP+R+
Sbjct: 347 ------AMYVVMPIRL 356


>gi|167589704|ref|ZP_02382092.1| DNA polymerase III subunit beta [Burkholderia ubonensis Bu]
          Length = 368

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGADVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGNDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGASLSVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKIEGGAFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|296446087|ref|ZP_06888036.1| DNA polymerase III, beta subunit [Methylosinus trichosporium OB3b]
 gi|296256446|gb|EFH03524.1| DNA polymerase III, beta subunit [Methylosinus trichosporium OB3b]
          Length = 371

 Score =  256 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 142/387 (36%), Positives = 222/387 (57%), Gaps = 18/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+T++R+ +L+ L    RI E++ TIP+  H LL+ + G L I+A+  +IE    + A 
Sbjct: 1   MKLTIDRAPLLKALETTRRIAEQRTTIPILSHALLETDHGRLCIRATDLDIETRILLDAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G++ VSA +L+D+ RKL + AQ     E +   ++ +  G S F L + P   FP 
Sbjct: 61  IAETGALAVSAAVLHDLTRKLPEKAQ--ITLEGQEAGQLQMRSGRSRFKLSTLPADTFPD 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLK--LCAVATDG 178
           T E  +   F L ++ L  ++ +T FA++TEE RYYLNG+FFH  E+D +  L  VATDG
Sbjct: 119 TTEHGFSADFALPAATLARMLGKTAFAISTEETRYYLNGVFFHHMEDDGRALLRMVATDG 178

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRL+  E +  A  A MP +IVPRKA  EI R+L  +++  ++++S +++  ++  +++S
Sbjct: 179 HRLSRIETEAPAGAAAMPGVIVPRKACAEIERLLKGQEAEARLAVSANKLRFSLGDVTLS 238

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP+Y  VIP  NDK   ++ T +  A DRVS + S R +AVKLS  +  L ++
Sbjct: 239 TKLIDGTFPDYARVIPQGNDKRATLDRTAMAAAADRVSTIHSERGRAVKLSFDASALTLS 298

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           V NPDMG+A + M   Y+  P++I FN +YL E +  +       D  V RL    +   
Sbjct: 299 VTNPDMGEARDEMEADYDSSPIEIGFNSRYLAEALQVLEG-----DSAVIRLADPGAPTL 353

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +            + +   VLMPMR+
Sbjct: 354 FQSA---------TQPDLLIVLMPMRV 371


>gi|90415377|ref|ZP_01223311.1| DNA polymerase III, beta subunit [marine gamma proteobacterium
           HTCC2207]
 gi|90332700|gb|EAS47870.1| DNA polymerase III, beta subunit [marine gamma proteobacterium
           HTCC2207]
          Length = 366

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 128/386 (33%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK ++ R  +L  L     ++ER+ T+P+  +VLL  +   L +  +  E+EI G     
Sbjct: 1   MKFSLSREALLNPLQLVVGVVERRQTLPILSNVLLTLDGSRLAVTGTDLEVEIIGHADVV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
           S D  G +TVSA    DI R L +GA I F        +  +  G S F L + P +EFP
Sbjct: 61  SADEAGEVTVSARKFLDICRSLPEGANIKFSS---SDGKAQVVSGRSRFTLATLPANEFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           S    E    F++A  +LKNL++ T FAMA +++RYYLNG+ + ++    KL AVATDGH
Sbjct: 118 SVDNGENNIQFDIAGVILKNLIDATSFAMAQQDVRYYLNGMLWEVSAN--KLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+A+ + +   +I ++   I+PRK V E+ R L + +  V+V++  + I ++      + 
Sbjct: 176 RMALCDAECNIEIGELTKAILPRKGVIELSR-LVADEGVVRVAMGSNHIRVDGSDYCFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG +P+Y  V+P   DK +  N   L+QA  R +I+S+ + + V++ LS+  + M  
Sbjct: 235 KLVDGAYPDYDRVLPKGGDKLVEGNRAELKQAFGRTAILSNEKYRGVRIMLSNGAIKMVA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  YLL++++ +       D V   L  S+SS  +
Sbjct: 295 NNPEQEEAEEEVGVDYAGDELEIGFNVSYLLDVLNVLKG-----DGVRLTLSDSSSSALV 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S         A YV+MPMR+
Sbjct: 350 EDAADGS---------AVYVVMPMRL 366


>gi|161523182|ref|YP_001578194.1| DNA polymerase III subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|189348957|ref|YP_001944585.1| DNA polymerase III subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|221201813|ref|ZP_03574850.1| DNA polymerase III, beta subunit [Burkholderia multivorans CGD2M]
 gi|221207681|ref|ZP_03580689.1| DNA polymerase III, beta subunit [Burkholderia multivorans CGD2]
 gi|221214573|ref|ZP_03587543.1| DNA polymerase III, beta subunit [Burkholderia multivorans CGD1]
 gi|56798247|dbj|BAD82890.1| DnaN [Burkholderia multivorans]
 gi|160340611|gb|ABX13697.1| DNA polymerase III, beta subunit [Burkholderia multivorans ATCC
           17616]
 gi|189332979|dbj|BAG42049.1| DNA polymerase III, beta chain [Burkholderia multivorans ATCC
           17616]
 gi|221165463|gb|EED97939.1| DNA polymerase III, beta subunit [Burkholderia multivorans CGD1]
 gi|221172527|gb|EEE04966.1| DNA polymerase III, beta subunit [Burkholderia multivorans CGD2]
 gi|221178233|gb|EEE10643.1| DNA polymerase III, beta subunit [Burkholderia multivorans CGD2M]
          Length = 368

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 200/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGSDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGASLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKIDGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++    ++    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFQIGREELQRSLQRAAILTSDKFKGVRCIVAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|297717814|gb|ADI50050.1| DNA polymerase III beta subunit [Candidatus Odyssella
           thessalonicensis L13]
          Length = 375

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 133/390 (34%), Positives = 223/390 (57%), Gaps = 20/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  VER D L+ L H   ++E++ T+P+  HVL+QA D  L +  +  ++ +  +IPA 
Sbjct: 1   MKFAVERGDFLKALAHGGSVVEKRTTVPILSHVLIQAEDSQLHLTTTDMDLALVESIPAV 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  GSITVSAH+L +IVRKL DG +I      +   ++ +  G S F + + P  +FP 
Sbjct: 61  VEAPGSITVSAHMLLEIVRKLPDGVKIEATLN-QANDQLTLKAGKSRFNIATLPAEQFPK 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
             + +  +SF+L +  L+ L++R+ FAM+TEE RY+LNGI+FH +         +VATD 
Sbjct: 120 LTQNDLPFSFKLTAEKLRYLIDRSRFAMSTEETRYFLNGIYFHAHEINGQKVFRSVATDA 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK--DSSVKVSLSESRIHLNIESLS 236
           HRLA  EV +      +P IIV RK + EI ++++ +  ++ + +SLS  R+   +   +
Sbjct: 180 HRLACIEVPVPEGAESIPGIIVGRKTITEIRKLINDENPEAEITISLSPQRVEFKLPQAT 239

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           +S RL+DG +P+Y+  IP  NDK + V+  +  +AVDRV+ +++ ++  +K+S++ +KL 
Sbjct: 240 LSSRLVDGTYPDYEQAIPKGNDKPVIVDAKDFAKAVDRVATVTTDKLPVIKISVAKNKLT 299

Query: 297 MTVDNPDMGKAIESMNVYYNEC-PMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
           +   + ++G A E M V +     ++I FN  YL++I   I      D+     L   ++
Sbjct: 300 LVAASSELGDATEEMEVDFPFDHSIEIGFNANYLVDITSQIG-----DEAAEILLSDGSA 354

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              I+G +            A +VLMPMR+
Sbjct: 355 PAIIKGIND---------KEALFVLMPMRV 375


>gi|17548158|ref|NP_521560.1| DNA polymerase III subunit beta [Ralstonia solanacearum GMI1000]
 gi|17430465|emb|CAD16938.1| probable dna polymerase III (beta chain) protein [Ralstonia
           solanacearum GMI1000]
          Length = 371

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 117/391 (29%), Positives = 202/391 (51%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++ N   +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLIRKNGERVSFLSTDIEIQITTHADC 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
              +   + TV+A  L DI+R + DG       +      +++  G S F LQ+    EF
Sbjct: 61  GAGNGDIATTVAARKLVDILRAMPDGEVALTLNDK----RMSVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVATD
Sbjct: 117 PTVAEANDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVATD 174

Query: 178 GHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     +
Sbjct: 175 GHRLAYCGVETGEQPAGAGGRHEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++   L+QA+ R +I+++ + + V+  L ++ 
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYRNSFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTNV 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   D D+           YV+MPMRI
Sbjct: 350 SSALITLPDDDT---------FKYVVMPMRI 371


>gi|310817862|ref|YP_003950220.1| DNA polymerase III subunit beta [Stigmatella aurantiaca DW4/3-1]
 gi|309390934|gb|ADO68393.1| DNA polymerase III, beta subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 368

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 110/386 (28%), Positives = 203/386 (52%), Gaps = 19/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  +   ++ + L  A  I+ERK T+P+  +VL+ A    + + A   +I +    PA 
Sbjct: 1   MEFRIAADELKKALYRAQGIVERKTTMPILANVLVNATKSGVTVTAFDLDIGVVSEHPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G++T++A  ++DIV+ L D        +      V+I+ G ++F +      E+P 
Sbjct: 61  VSKPGAVTLNAKYIFDIVQNLPD---AQVTLKKLANNYVDIASGSAHFKIVGMAAEEYPK 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             +EE     +++ + L  ++++T FA++++E RY LNG++F       K+  VATDGHR
Sbjct: 118 LPKEENAPLVQVSGNTLLEMIKKTQFAISSDETRYILNGVYFEPQSG-GKVRMVATDGHR 176

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMSV 239
           LA+ E ++         +I+PRK + E+ R+L    D+   +  +E+        L+M +
Sbjct: 177 LALIERELNGDFKLKGGVIIPRKGLMELKRLLDEAPDAECHLGFAENSALFKKPGLTMVM 236

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           RLIDG+FP YQ VIP   +K + V+     + + R++++S+ +  AV++ L  +KL +T 
Sbjct: 237 RLIDGQFPEYQRVIPKEGEKVVLVSKVRFLEGLKRIALLSADKSYAVRIGLEQNKLLITS 296

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NPD+G+A +++ + Y    + I FN +YL++++    +     DEV F L   +S   +
Sbjct: 297 NNPDLGEARDALEIAYRGGDITIGFNARYLIDVLTVTET-----DEVSFELGDEHSPGVL 351

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +   V+MPMR+
Sbjct: 352 HAPGD---------RSFTAVVMPMRV 368


>gi|115378321|ref|ZP_01465487.1| DNA polymerase III, beta subunit [Stigmatella aurantiaca DW4/3-1]
 gi|115364675|gb|EAU63744.1| DNA polymerase III, beta subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 444

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 110/386 (28%), Positives = 203/386 (52%), Gaps = 19/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  +   ++ + L  A  I+ERK T+P+  +VL+ A    + + A   +I +    PA 
Sbjct: 77  MEFRIAADELKKALYRAQGIVERKTTMPILANVLVNATKSGVTVTAFDLDIGVVSEHPAE 136

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G++T++A  ++DIV+ L D        +      V+I+ G ++F +      E+P 
Sbjct: 137 VSKPGAVTLNAKYIFDIVQNLPD---AQVTLKKLANNYVDIASGSAHFKIVGMAAEEYPK 193

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             +EE     +++ + L  ++++T FA++++E RY LNG++F       K+  VATDGHR
Sbjct: 194 LPKEENAPLVQVSGNTLLEMIKKTQFAISSDETRYILNGVYFEPQSG-GKVRMVATDGHR 252

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMSV 239
           LA+ E ++         +I+PRK + E+ R+L    D+   +  +E+        L+M +
Sbjct: 253 LALIERELNGDFKLKGGVIIPRKGLMELKRLLDEAPDAECHLGFAENSALFKKPGLTMVM 312

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           RLIDG+FP YQ VIP   +K + V+     + + R++++S+ +  AV++ L  +KL +T 
Sbjct: 313 RLIDGQFPEYQRVIPKEGEKVVLVSKVRFLEGLKRIALLSADKSYAVRIGLEQNKLLITS 372

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NPD+G+A +++ + Y    + I FN +YL++++    +     DEV F L   +S   +
Sbjct: 373 NNPDLGEARDALEIAYRGGDITIGFNARYLIDVLTVTET-----DEVSFELGDEHSPGVL 427

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +   V+MPMR+
Sbjct: 428 HAPGD---------RSFTAVVMPMRV 444


>gi|83749734|ref|ZP_00946711.1| DNA polymerase III, beta chain [Ralstonia solanacearum UW551]
 gi|207727477|ref|YP_002255871.1| dna polymerase III (beta chain) protein [Ralstonia solanacearum
           MolK2]
 gi|207741916|ref|YP_002258308.1| dna polymerase III (beta chain) protein [Ralstonia solanacearum
           IPO1609]
 gi|83723586|gb|EAP70787.1| DNA polymerase III, beta chain [Ralstonia solanacearum UW551]
 gi|206590714|emb|CAQ56326.1| dna polymerase III (beta chain) protein [Ralstonia solanacearum
           MolK2]
 gi|206593302|emb|CAQ60229.1| dna polymerase III (beta chain) protein [Ralstonia solanacearum
           IPO1609]
          Length = 371

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 118/391 (30%), Positives = 203/391 (51%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++ N   +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLIRKNGERVSFLSTDIEIQITTHADC 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
              +   + TV+A  L DI+R + DG       +      +++  G S F LQ+    EF
Sbjct: 61  GAGNGDIATTVAARKLVDILRAMPDGEVTLTLNDK----RMSVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVATD
Sbjct: 117 PTVAEANDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVATD 174

Query: 178 GHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     +
Sbjct: 175 GHRLAYCGVETGEQPAGAGGRHEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++ T L+QA+ R +I+++ + + V+  L ++ 
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYRNSFTIDRTFLQQALQRTAILTTDKFKGVRCMLDTNV 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   D D+           YV+MPMRI
Sbjct: 350 SSALITLPDDDT---------FKYVVMPMRI 371


>gi|107024099|ref|YP_622426.1| DNA polymerase III subunit beta [Burkholderia cenocepacia AU 1054]
 gi|116688026|ref|YP_833649.1| DNA polymerase III subunit beta [Burkholderia cenocepacia HI2424]
 gi|170731358|ref|YP_001763305.1| DNA polymerase III subunit beta [Burkholderia cenocepacia MC0-3]
 gi|206558824|ref|YP_002229584.1| DNA polymerase III subunit beta [Burkholderia cenocepacia J2315]
 gi|105894288|gb|ABF77453.1| DNA polymerase III, beta subunit [Burkholderia cenocepacia AU 1054]
 gi|116646115|gb|ABK06756.1| DNA polymerase III, beta subunit [Burkholderia cenocepacia HI2424]
 gi|169814600|gb|ACA89183.1| DNA polymerase III, beta subunit [Burkholderia cenocepacia MC0-3]
 gi|198034861|emb|CAR50733.1| DNA polymerase III, beta chain [Burkholderia cenocepacia J2315]
          Length = 368

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 108/388 (27%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQIATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  +  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGATLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + +         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKLEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|300702376|ref|YP_003743976.1| DNA polymerase III subunit beta [Ralstonia solanacearum CFBP2957]
 gi|299070037|emb|CBJ41322.1| DNA polymerase III, beta-subunit [Ralstonia solanacearum CFBP2957]
          Length = 371

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 118/391 (30%), Positives = 203/391 (51%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++ N   +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLIRKNGERVSFLSTDIEIQITTHADC 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
              +   + TV+A  L DI+R + DG       +      +++  G S F LQ+    EF
Sbjct: 61  GAGNGDIATTVAARKLVDILRAMPDGEVSLTLNDK----RMSVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVATD
Sbjct: 117 PTVAEANDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVATD 174

Query: 178 GHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     +
Sbjct: 175 GHRLAYCGVETGEQPAGAGGRHEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++ T L+QA+ R +I+++ + + V+  L ++ 
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYRNSFTIDRTFLQQALQRTAILTTDKFKGVRCMLDTNV 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   D D+           YV+MPMRI
Sbjct: 350 SSALITLPDDDT---------FKYVVMPMRI 371


>gi|171316344|ref|ZP_02905564.1| DNA polymerase III, beta subunit [Burkholderia ambifaria MEX-5]
 gi|171098473|gb|EDT43275.1| DNA polymerase III, beta subunit [Burkholderia ambifaria MEX-5]
          Length = 368

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 108/388 (27%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  +  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGATLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + +         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKLEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|197116404|ref|YP_002136831.1| DNA polymerase III subunit beta [Geobacter bemidjiensis Bem]
 gi|197085764|gb|ACH37035.1| DNA polymerase III, beta subunit [Geobacter bemidjiensis Bem]
          Length = 372

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 203/389 (52%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  + +   ++ L     I+E++NT+P+  + LL+  +  L I A+  E+ +  + P +
Sbjct: 1   MEFRISKEIFMKALQRIQGIVEKRNTMPILSNALLEVQNDQLFITATDLEVGMKSSYPTA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G ITVSA  LY+IV+++ D       K+N+    V I+ G + F +      EFP 
Sbjct: 61  VIREGKITVSAKKLYEIVKEMPDEEIHFTTKDNDW---VEITCGKARFNIVGLSSEEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
             + +        + +L +++E+T +A+  +E +Y LNG+F        +  L  VATDG
Sbjct: 118 FPKVKEESFLVFKNEILADMIEKTSYAICYDETKYNLNGVFIKAFDENGENVLKMVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPS--IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL+V++  I   I    S  +I P+K + E+ +++  +D  + +   ++   +   +  
Sbjct: 178 HRLSVSQKAITGNITSELSKGVIFPKKGIFELKKMVEEEDGEIMLGFMDNSAVIKKGNTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RLIDGEFP+Y  VIP SND+ +++N      ++ R++I+SS + + VK+ ++ + + 
Sbjct: 238 VVMRLIDGEFPDYTKVIPASNDRIVQINRDKFLHSLKRMAILSSEKFKGVKIEVNPELVI 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G+A E + V Y    +   FN KYL++++  +        EV  +L    S 
Sbjct: 298 ISSSNPELGEAREEIEVQYEGNNISARFNAKYLIDVLSVMEQR-----EVELKLKDELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           V ++   ++             V+MPMR+
Sbjct: 353 VIMKAAAEEE---------FLAVIMPMRL 372


>gi|299065056|emb|CBJ36217.1| DNA polymerase III, beta-subunit [Ralstonia solanacearum CMR15]
          Length = 371

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 117/391 (29%), Positives = 202/391 (51%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++ N   +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLIRKNGERVSFLSTDIEIQITTHADC 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
              +   + TV+A  L DI+R + DG       +      +++  G S F LQ+    EF
Sbjct: 61  GAGNGDIATTVAARKLVDILRAMPDGEVALTLNDK----RMSVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVATD
Sbjct: 117 PTVAEANDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVATD 174

Query: 178 GHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     +
Sbjct: 175 GHRLAYCGVETGEQPAGAGGRHEVIIPRKTILELQRLLEDIDDPVSVQLASNQVKFTFGN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++   L+QA+ R +I+++ + + V+  L ++ 
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYRNGFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTNV 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   D D+           YV+MPMRI
Sbjct: 350 SSALITLPDDDT---------FKYVVMPMRI 371


>gi|88813025|ref|ZP_01128267.1| DNA polymerase III subunit beta [Nitrococcus mobilis Nb-231]
 gi|88789658|gb|EAR20783.1| DNA polymerase III subunit beta [Nitrococcus mobilis Nb-231]
          Length = 366

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 129/385 (33%), Positives = 204/385 (52%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  VER+ +L+ L     ++ER+ T+P+  ++LL A +  L I A+  E+EI     A 
Sbjct: 1   MEFDVERTALLKALQSIIGVVERRQTLPILANILLDAREQRLAITATDLEVEIQAHAQAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G  T+ A  L DIVR L + A I     ++    + +    S F L + P  +FP+
Sbjct: 61  LSQAGETTLPARKLMDIVRNLPEHADIHVSTSHD---RIALQLPHSRFTLATLPTKDFPT 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +E       EL  S L+ L++RT FAMA +++RYYLNG+      E   L AVATDGHR
Sbjct: 118 VEEIGQTQDLELTQSHLRWLIDRTGFAMALQDVRYYLNGLLLE--LEPYCLRAVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+AEV     + +   +IVPRK + E+LR+L+  D  +++ L ++ I +    +  + +
Sbjct: 176 LALAEVVTELPLTETKQVIVPRKGIQELLRLLTDSDEPLRLELGDNHIRVTWPEVRFTTK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L+DG+FP+YQ VIP  N   L+V    LRQA+ R +I+S+  +  V+  L    L +  +
Sbjct: 236 LLDGQFPSYQRVIPKQNGGCLQVERHTLRQALIRAAILSNEHLHGVRFILGGTSLRICSN 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP   +A E +   Y+    +I FN  YLL+ +  I      +  V   L ++NSS  +R
Sbjct: 296 NPAQEEAEEELTAAYDGEAFEIGFNASYLLDALAAIE-----ESTVEIFLTNANSSALLR 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
           G   +            YV+MP+R+
Sbjct: 351 GAGNE---------RCRYVVMPLRL 366


>gi|300689716|ref|YP_003750711.1| DNA polymerase III, beta-subunit [Ralstonia solanacearum PSI07]
 gi|299076776|emb|CBJ49383.1| DNA polymerase III, beta-subunit [Ralstonia solanacearum PSI07]
          Length = 371

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 117/391 (29%), Positives = 202/391 (51%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L++ N   +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLIRKNGERVSFLSTDIEIQITTHADC 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
              +   + TV+A  L DI+R + DG       +      +++  G S F LQ+    EF
Sbjct: 61  GAGNGDIATTVAARKLVDILRAMPDGEVALTLNDK----RMSVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVATD
Sbjct: 117 PTVAEASDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVATD 174

Query: 178 GHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     +
Sbjct: 175 GHRLAYCGVETGEQPAGAGGRHEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++   L+QA+ R +I+++ + + V+  L ++ 
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYRNSFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTNV 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   D D+           YV+MPMRI
Sbjct: 350 SSALITLPDDDT---------FKYVVMPMRI 371


>gi|238025686|ref|YP_002909917.1| DNA polymerase III subunit beta [Burkholderia glumae BGR1]
 gi|237874880|gb|ACR27213.1| DNA polymerase III, beta subunit [Burkholderia glumae BGR1]
          Length = 368

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 106/388 (27%), Positives = 197/388 (50%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+      +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKTGSDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGEQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D  V + +++++       + +
Sbjct: 175 GHRLAYSSMKIDGGTFPRQEVIVPRKTILELQRLLEDIDDVVNIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFTIGREELQRSLQRAAILTSDKFKGVRCIVAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       + +   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VENIQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITIPEIDE---------FKYVVMPMRI 368


>gi|254251051|ref|ZP_04944369.1| DNA polymerase sliding clamp subunit [Burkholderia dolosa AUO158]
 gi|124893660|gb|EAY67540.1| DNA polymerase sliding clamp subunit [Burkholderia dolosa AUO158]
          Length = 368

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 200/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGASLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + +         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKLEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++    ++    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFQIGREELQRSLQRAAILTSDKFKGVRCIVAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|78064660|ref|YP_367429.1| DNA polymerase III subunit beta [Burkholderia sp. 383]
 gi|115350058|ref|YP_771897.1| DNA polymerase III subunit beta [Burkholderia ambifaria AMMD]
 gi|170697755|ref|ZP_02888842.1| DNA polymerase III, beta subunit [Burkholderia ambifaria IOP40-10]
 gi|172059069|ref|YP_001806721.1| DNA polymerase III subunit beta [Burkholderia ambifaria MC40-6]
 gi|77965405|gb|ABB06785.1| DNA polymerase III, beta subunit [Burkholderia sp. 383]
 gi|115280046|gb|ABI85563.1| DNA polymerase III, beta subunit [Burkholderia ambifaria AMMD]
 gi|170137370|gb|EDT05611.1| DNA polymerase III, beta subunit [Burkholderia ambifaria IOP40-10]
 gi|171991586|gb|ACB62505.1| DNA polymerase III, beta subunit [Burkholderia ambifaria MC40-6]
          Length = 368

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 107/388 (27%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  +  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGATLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + +         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKLEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + +            YV+MPMRI
Sbjct: 350 LITVPENEE---------FKYVVMPMRI 368


>gi|296115230|ref|ZP_06833871.1| DNA polymerase III subunit beta [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978331|gb|EFG85068.1| DNA polymerase III subunit beta [Gluconacetobacter hansenii ATCC
           23769]
          Length = 374

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 137/390 (35%), Positives = 213/390 (54%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+  +R+ +L+ L H   + E++NTIP+  +VL+   DGL+ + A+  EI +   I A 
Sbjct: 1   MKLKADRATLLKALLHIQGVAEKRNTIPILANVLINVTDGLMTMTATDMEIAVVEGISAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G++T  A +L DIVR+L DGA +   +       + +  G  +  L      +FPS
Sbjct: 61  TLRDGAVTAPAAVLCDIVRRLPDGAVVELDQAGGDAP-LALRAGRFSTSLNVLDVDDFPS 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
                  + F +AS  L+ L++R+ FA++TEE RYYLNGI+FH     +   L AVATDG
Sbjct: 120 MMAGALPHDFTIASQALRGLIDRSRFAISTEETRYYLNGIYFHVAETPQGPMLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E D+    A MP +I+PRK V E+ ++L      + ++LS++RI   + ++ ++
Sbjct: 180 HRLARVETDLPDGAAGMPGVIIPRKTVNELRKLLEEGPEHIGIALSDTRIQFTVGNVILT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP Y+ VIP  NDK L V       AV RV+ +S  R + VKL+++ + L ++
Sbjct: 240 SKLIDGTFPEYERVIPTGNDKVLHVGKKIFSDAVSRVAAISQERSRPVKLAVTQNLLTLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             + D G A E ++   V Y+  P++I F  +YL +I D I         V F    S++
Sbjct: 300 AASQDQGTATEELDDTHVVYDASPIEIGFQARYLNDITDQIE------KNVEFAFSDSSA 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R  D         + +A YVLMPMR+
Sbjct: 354 PTIVRDVD---------RPSALYVLMPMRV 374


>gi|325528072|gb|EGD05284.1| DNA polymerase III subunit beta [Burkholderia sp. TJI49]
          Length = 368

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGASLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + +         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKLEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIVAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|134294130|ref|YP_001117865.1| DNA polymerase III subunit beta [Burkholderia vietnamiensis G4]
 gi|134137287|gb|ABO53030.1| DNA polymerase III, beta subunit [Burkholderia vietnamiensis G4]
          Length = 368

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFAASLSVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +V + +++++       + +
Sbjct: 175 GHRLAFSSMKIEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGGVEL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 235 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 295 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 350 LITVPENDE---------FKYVVMPMRI 368


>gi|326403632|ref|YP_004283714.1| DNA polymerase III beta subunit [Acidiphilium multivorum AIU301]
 gi|325050494|dbj|BAJ80832.1| DNA polymerase III beta subunit [Acidiphilium multivorum AIU301]
          Length = 374

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 211/390 (54%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+  +R+ +L+ L H   ++E++NTIP+  +VLL   +G L I A+  EI +   + A+
Sbjct: 1   MKLKADRATLLKALAHVQNVVEKRNTIPILANVLLSVKEGRLTIAATDLEIALIEEVAAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS+T  A  LY+IVR+  D A+I           + +  G     L   P  EFP 
Sbjct: 61  TMRDGSVTAPAATLYEIVRRQPDNAEIELDHPGGDAP-LALRAGRYATKLVVLPTDEFPK 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               +  + F + +  L+ L++RT FA++TEE RYYLNGI+ H   +E    L AVATDG
Sbjct: 120 LDAGKLTHRFAVPAQALRGLIDRTRFAISTEETRYYLNGIYLHSAESEGVPVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E  +    A MP +IVPRK V EI ++L      V ++LSE+RI   ++++ M+
Sbjct: 180 HRLARVEEPLPEGAAGMPGVIVPRKTVNEIRKLLDEVSGDVSIALSETRIQFELDTMRMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG +P+Y  VIP  NDK LRV   +   AV RVS ++S R + VKLS+  D L ++
Sbjct: 240 SKLIDGTYPDYSKVIPTGNDKILRVETADFSAAVARVSAITSERNKPVKLSVGRDLLVLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             +PD G A E ++   V Y   P++I F  +YL ++ + I        +V F      +
Sbjct: 300 ATSPDQGTATEELDAEQVEYRATPLEIGFQARYLNDVTEQIKG------KVEFCFADGAA 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R    +S         A +VLMPMR+
Sbjct: 354 PTLVRAAGDES---------AIFVLMPMRV 374


>gi|148260438|ref|YP_001234565.1| DNA polymerase III subunit beta [Acidiphilium cryptum JF-5]
 gi|146402119|gb|ABQ30646.1| DNA polymerase III, beta subunit [Acidiphilium cryptum JF-5]
          Length = 374

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 211/390 (54%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+  +R+ +L+ L H   ++E++NTIP+  +VLL   +G L I A+  EI +   + A+
Sbjct: 1   MKLKADRATLLKALAHVQNVVEKRNTIPILANVLLSVKEGRLTIAATDLEIALIEEVAAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS+T  A  LY+IVR+  D A+I           + +  G     L   P  EFP 
Sbjct: 61  TMRDGSVTAPAATLYEIVRRQPDNAEIELDHPGGDAP-LALRAGRYATKLVVLPTDEFPK 119

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
               +  + F + +  L+ L++RT FA++TEE RYYLNGI+ H   +E    L AVATDG
Sbjct: 120 LDAGKLTHRFAVPAQALRGLIDRTRFAISTEETRYYLNGIYLHAAESEGVPVLRAVATDG 179

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E  +    A MP +IVPRK V EI ++L      V ++LSE+RI   ++++ M+
Sbjct: 180 HRLARVEEPLPEGAAGMPGVIVPRKTVNEIRKLLDEVSGDVSIALSETRIQFELDTMRMT 239

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG +P+Y  VIP  NDK LRV   +   AV RVS ++S R + VKLS+  D L ++
Sbjct: 240 SKLIDGTYPDYSKVIPTGNDKILRVETADFSAAVARVSAITSERNKPVKLSVGRDLLVLS 299

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             +PD G A E ++   V Y   P++I F  +YL ++ + I        +V F      +
Sbjct: 300 ATSPDQGTATEELDAEQVEYRATPLEIGFQARYLNDVTEQIKG------KVEFCFADGAA 353

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R    +S         A +VLMPMR+
Sbjct: 354 PTLVRAAGDES---------AIFVLMPMRV 374


>gi|134297883|ref|YP_001111379.1| DNA polymerase III subunit beta [Desulfotomaculum reducens MI-1]
 gi|134050583|gb|ABO48554.1| DNA polymerase III, beta subunit [Desulfotomaculum reducens MI-1]
          Length = 365

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 111/384 (28%), Positives = 193/384 (50%), Gaps = 21/384 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI   R ++++ +  A R +  KN +P+   +LL A D  L+++A+  E+ I   +P +
Sbjct: 1   MKIICTRQNLIQGVTTAQRAVSAKNPLPILSGILLTAKDNKLKLQATDLEMGIQCVVPCT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GSI + A  L +IVR+L D        E+  GT V I +G S   +  F   EFP+
Sbjct: 61  TQEEGSIVLPAKYLSEIVRRLPDSP---IQIESNQGTNVIIRYGQSEITINGFDAEEFPT 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             + +   S  +    LK  + +  FA  ++E R    G+   I      L  V TD HR
Sbjct: 118 FPKPQSKNSLTIPEEELKEYLRQILFATLSDENRPVFTGVLMEILNG--TLRLVTTDTHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ E+   + +    +II+P K + E+ R++ + D  V +SL E++I   +E   +  R
Sbjct: 176 LAMREIK-DSSVDNDINIIIPGKTLNELTRVIGAADQQVTISLGENQIIFGMEDTLLISR 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LI+G+FPNY+ VIP  +   +R+   +L +A +R S+++ V  Q ++L++  +K+ +T  
Sbjct: 235 LIEGQFPNYRQVIPQGHKTRIRLKTKDLLEASERASLLARVGTQIIRLNIEEEKIILTA- 293

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N ++G+  E + VY     + I FN  YL++ +  I S     D + F L    S   +R
Sbjct: 294 NTEVGRIHEEVPVYLQGESLQISFNAMYLIDALRAIGS-----DNIYFDLSGPLSPGILR 348

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMR 384
             + D         +   +++P+R
Sbjct: 349 PVEGD---------DYLSLILPVR 363


>gi|325954048|ref|YP_004237708.1| DNA polymerase III subunit beta [Weeksella virosa DSM 16922]
 gi|323436666|gb|ADX67130.1| DNA polymerase III, beta subunit [Weeksella virosa DSM 16922]
          Length = 372

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/386 (24%), Positives = 173/386 (44%), Gaps = 17/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V  + +L+ +     +I   NT+P+  + L +     L I  S  E  I+      
Sbjct: 1   MKFIVSSNTLLKNVNTIGGVINNNNTLPILDNFLFELKGNELTITGSDLETTISTTFEVE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
            +  G I V + +L D ++           K+   G  + I     N+ L     SE+P 
Sbjct: 61  SEDEGKIAVPSKILTDTLKTFPAQPLTFIQKD---GNTLEIVSEQGNYQLAYEDASEYPQ 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
           T + E  +  +L +SV+   + +T FA   +E+R  + G+ F    +      VATD HR
Sbjct: 118 TPDVEEAHLTKLPASVISEAILKTIFATGNDELRPIMTGVLFQAQPD--VFNFVATDAHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           L       +  + +    I+P+K +  +  IL   +  V +  +++      +++ ++ R
Sbjct: 176 LVKYSRTGLQSV-EAAEYIMPKKPLNLLKNILGGNNDEVTIEYNQTNTRFTFQNIVLTCR 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG++PNY  VIP  N   L +N      ++ RV+I S+     ++L L  + L ++ +
Sbjct: 235 LIDGKYPNYDAVIPKENPNVLTINRNLFLSSLKRVAIFSNKTTNQIRLKLIGNSLTISAE 294

Query: 301 NPDMG-KAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           + D   KA E +   YN   + I FN K+L+E+++N+ S     D++   +   N +  I
Sbjct: 295 DVDFANKAEERLPCEYNGTDLQIGFNSKFLIEMLNNLQS-----DDITLEMSEPNRAGII 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +  D       +       ++MP+ +
Sbjct: 350 KPVD-----GLEEGEEILMLVMPVML 370


>gi|315125113|ref|YP_004067116.1| DNA polymerase III subunit beta [Pseudoalteromonas sp. SM9913]
 gi|315013626|gb|ADT66964.1| DNA polymerase III subunit beta [Pseudoalteromonas sp. SM9913]
          Length = 367

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 215/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+IT+ R   L+ L      IERK+T+P+  +VLL   +G L +  +  EIE+  ++   
Sbjct: 1   MQITISREQFLKPLVQVSGAIERKHTLPILSNVLLVVENGQLSMTGTDLEIELVASVFVG 60

Query: 61  VDV-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            DV    +T+ A  L DI + L DG+ ++   ++    ++ ++ G S F L +    +FP
Sbjct: 61  DDVADTKLTLPAKKLLDICKSLPDGSDLTLSLQD---HQLLLTSGKSRFSLTTLAAEDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F+L    L+ L+E THF+MA +++RYYLNG+ F    ++  +  VATDGH
Sbjct: 118 NLEQWDGEVEFQLTRLELRKLLESTHFSMANQDVRYYLNGMSFE--VDNSDIKTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A+  +   +     +I+PRK V EI+R++ +    V +    + I +     + + 
Sbjct: 176 RLAIAQKQLGQSLNTQRQLIIPRKGVQEIMRLMVADQELVTIQFGANHIRIIDIEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  N   LR A  RVSI+S+ + + V+L+LS+  L +T 
Sbjct: 236 KLVDGRFPDYRRVLPRGGDKVITANREWLRNAFQRVSILSNEKFRGVRLNLSNGLLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  Y+L++++ + +     ++V+F L  SNSS  I
Sbjct: 296 NNPEQEQAEEVVEVMYEGDDLEIGFNVSYVLDVLNTLKT-----EDVLFTLADSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
            G   +          A YV+MPMR+
Sbjct: 351 EGAGDEE---------AMYVVMPMRL 367


>gi|323703941|ref|ZP_08115571.1| DNA polymerase III, beta subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|323531099|gb|EGB21008.1| DNA polymerase III, beta subunit [Desulfotomaculum nigrificans DSM
           574]
          Length = 365

 Score =  254 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 192/384 (50%), Gaps = 21/384 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI   R ++++ +  A R +  KN +P+   +L  A +  LE+ A+  E+ I   IPA+
Sbjct: 1   MKIICTRQNLVQGVTTAQRGVSAKNPLPILSGILFIAKNNSLELHATDLEMGIQCTIPAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   GSI + A  L +IVR+L D        +        I +G S   +  +   EFP 
Sbjct: 61  VQEEGSIVLPARYLGEIVRRLPDAP---IQIDATQDNNAIIRYGQSEITINGYDAQEFPV 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               +   S  +    LK ++ +  FA +T+E R    G+    N     L  VATD HR
Sbjct: 118 LPTPQGKGSLSIPEEDLKEILRQVLFATSTDENRPVFTGVLMENNNGC--LRLVATDTHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+ E +I   I    S+I+P KA+ E+ R++ + D +V +SL ++++  ++E   +  R
Sbjct: 176 LALREENIGNDIED-ISVIIPGKALNELARVIGAPDRNVTISLGDNQVIFSMEDTRLVSR 234

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LI+G+FPNY+ VIP      LR+    L ++V+R S+++ V  Q V+L++  +K+ +T  
Sbjct: 235 LIEGQFPNYRQVIPRGYKTRLRMRTKELLESVERASLLARVGSQIVRLAIEEEKVIITA- 293

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N ++G+  E + V+ +     I FN  YL++ +  I S     D +   L    S   +R
Sbjct: 294 NTEVGRIHEEVPVFLDGETTAISFNAVYLIDALRAIGS-----DNIYLDLSGPLSPGILR 348

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMR 384
             ++D         N   +++P+R
Sbjct: 349 PVEED---------NYLSLVLPVR 363


>gi|307825355|ref|ZP_07655574.1| DNA polymerase III, beta subunit [Methylobacter tundripaludum SV96]
 gi|307733530|gb|EFO04388.1| DNA polymerase III, beta subunit [Methylobacter tundripaludum SV96]
          Length = 366

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 114/385 (29%), Positives = 201/385 (52%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  + R +IL  L     +IE++ T+P+  +VL+   +  L +  +  EI+I   I  +
Sbjct: 1   MKFIINREEILVPLQQIVSVIEKRQTMPILSNVLMVIEENQLILTGTDLEIQIIAKINIA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GSITV A    DI R L +GA+I F  +++   +V I+   S F L   P   +P 
Sbjct: 61  TATPGSITVPARKFLDICRLLPNGAEIKFELQDD---KVKIASSRSRFSLSCLPADNYPE 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E E      + +   K  +++T F MA +++RYYLNG+  +++    KL  VA+DGHR
Sbjct: 118 FAESELENHLFINAGKFKKALDKTVFCMANQDVRYYLNGLLLNVSN--SKLKLVASDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           L++ E ++         II+PRK V E+ R+L   ++ +KV  S + I + I++L  S +
Sbjct: 176 LSIYEDNLDQATGFEARIILPRKGVLELNRLLDDPEAELKVEFSSNNIRIFIKNLIFSAK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L+D ++P++  V       ++ +    L++A+ RV+I+S+ + + V   +  D L ++  
Sbjct: 236 LVDSKYPDFGKVFQQEFFNQIHIQKQILKEALTRVAILSNEKFKGVTFDIKPDSLKISTH 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A E + + Y   P+ I FN +YLL+ + N+ S     +  V  + S+ SS FI 
Sbjct: 296 NPEHDEAEEELFIEYTGEPLTIAFNAQYLLDAVSNLDS-----ELAVLTIASNASSCFI- 349

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
                   ++       +++MPMR+
Sbjct: 350 --------DEPGDCGYKFIVMPMRL 366


>gi|119471659|ref|ZP_01614044.1| DNA polymerase III, beta-subunit; processivity clamp of DNA
           polymerase III [Alteromonadales bacterium TW-7]
 gi|119445438|gb|EAW26725.1| DNA polymerase III, beta-subunit; processivity clamp of DNA
           polymerase III [Alteromonadales bacterium TW-7]
          Length = 367

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+IT+ R   L+ L      IERK+T+P+  +VLL   +G L +  +  EIE+   +   
Sbjct: 1   MQITISRQQFLKPLVQVSGAIERKHTLPILSNVLLVVENGQLSMTGTDLEIELVSGVFVG 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                  +T+ A  L DI + L +G+ I+   ++    ++ ++ G S F L +   ++FP
Sbjct: 61  DDIADTKLTLPAKKLLDICKSLPEGSDITLSLQD---HQLLLTSGKSRFSLTTLSAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + +E +    F+L    L+ L+E THF+MA +++RYYLNG+ F    ++  +  VATDGH
Sbjct: 118 NLEEWDGEVEFQLTRLELRKLLESTHFSMANQDVRYYLNGMSFE--VDNSDIKTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A+  +   +     +I+PRK V EI+R++ + D  V +    + I +     + + 
Sbjct: 176 RLAIAQKKLTQSLNTQRQLIIPRKGVQEIMRLMVADDELVTIQFGANHIRIIDIEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  N   LR A  RVSI+S+ + + V+L+LS+  L +T 
Sbjct: 236 KLVDGRFPDYRRVLPRGGDKTIIANREWLRNAFQRVSILSNEKFRGVRLNLSNGLLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  Y+L++++ + +     ++V F L  SNSS  I
Sbjct: 296 NNPEQEQAEEVVEVNYQGDELEIGFNVSYVLDVLNTLKT-----EDVQFTLADSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
            G   D          A YV+MPMR+
Sbjct: 351 EGAGDDE---------AMYVVMPMRL 367


>gi|241661627|ref|YP_002979987.1| DNA polymerase III subunit beta [Ralstonia pickettii 12D]
 gi|240863654|gb|ACS61315.1| DNA polymerase III, beta subunit [Ralstonia pickettii 12D]
          Length = 371

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 116/391 (29%), Positives = 198/391 (50%), Gaps = 26/391 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L+      +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLITKQGERVSFLSTDIEIQITTHADC 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
                  + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GAGAGDIATTVAARKLVDILRAMPDGEVALTLNDK----RMTVQSGKSRFALQTLAAEEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVATD
Sbjct: 117 PTVAEATDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVATD 174

Query: 178 GHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIES 234
           GHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     +
Sbjct: 175 GHRLAYCGVETGEQPAGAGGRQEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGN 234

Query: 235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDK 294
           + +  +L++G+FP++Q VIP        ++   L+QA+ R +I+++ + + V+  L ++ 
Sbjct: 235 IELISKLVEGKFPDFQRVIPKGYRNSFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTNV 294

Query: 295 LCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSN 354
           L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  SN
Sbjct: 295 LKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDSN 349

Query: 355 SSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           SS  I   D D+           YV+MPMRI
Sbjct: 350 SSALITLPDDDT---------FKYVVMPMRI 371


>gi|108761971|ref|YP_628517.1| DNA polymerase III subunit beta [Myxococcus xanthus DK 1622]
 gi|108465851|gb|ABF91036.1| DNA polymerase III, beta subunit [Myxococcus xanthus DK 1622]
          Length = 368

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 203/386 (52%), Gaps = 19/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  +   ++ + L  A  I+ERK T+P+  +VL+ AN G + + A   +I +    PA 
Sbjct: 1   MEFRIAADELKKALYRAQGIVERKTTMPILANVLVTANKGGITVTAFDLDIGVVSEHPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G++T+SA  ++DIV+ L D        +      V+IS G ++F +      E+P 
Sbjct: 61  VIKTGAVTLSAKYVFDIVQNLPD---AQVTLKKLANNYVDISSGSAHFKIVGMAAEEYPK 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             +EE     ++  + L  ++++T FA++++E RY LNG+FF       K+  VATDGHR
Sbjct: 118 LPKEENAPLVQVGGNTLLEMIKKTQFAISSDETRYILNGVFFEPQS-TGKVRMVATDGHR 176

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMSV 239
           LA+ E ++         +I+PRK + E+ R+L    D+   +  +E+        L+M +
Sbjct: 177 LALVERELPGDFKLKSGVIIPRKGLMELKRLLDEAPDAECHLGFAENSALFKKPGLTMVM 236

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           RLIDG+FP YQ VIP   +K + V    L +++ R++++S+ +  AV++ L  ++L +T 
Sbjct: 237 RLIDGQFPEYQRVIPKEGEKIVLVPKVRLLESLKRIALLSADKSNAVRIGLEENQLIITA 296

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NPD+G+A + + + Y    + I FN +YL++++    +     DEV F L   +S   +
Sbjct: 297 SNPDLGEAKDVLELAYRGNGITIGFNARYLMDVLAVTET-----DEVSFELGDEHSPGVL 351

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                          +   V+MPMR+
Sbjct: 352 HAPGD---------RSFTAVVMPMRV 368


>gi|148262087|ref|YP_001228793.1| DNA polymerase III, beta subunit [Geobacter uraniireducens Rf4]
 gi|146395587|gb|ABQ24220.1| DNA polymerase III, beta subunit [Geobacter uraniireducens Rf4]
          Length = 372

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 204/389 (52%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  V +    + L     I+E++NT+P+  + L++A++  L I A+  E+ +  + P +
Sbjct: 1   MEFRVAKDTFTKALQKIQGIVEKRNTMPILSNTLIEAHNDTLYITATDLEVGMKSSYPVN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G ITVSA  +Y+I+++L D   +   KEN+    V I  G ++F +      EFP 
Sbjct: 61  VIKEGKITVSAKKIYEIIKELSDEEIVFSTKENDW---VEIHCGKAHFNIVGLSPDEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHIN--EEDLKLCAVATDG 178
             +        L + +L  ++E+T +A+  +E ++ LNGIF       E   L  VATDG
Sbjct: 118 FPKINDNSFITLNNQILSEMIEKTSYAICNDETKFNLNGIFIKATTENERNVLRMVATDG 177

Query: 179 HRLAVAEVDIVAQIAK--MPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL+V E ++   I+      +I P+K + E+ ++   +   + +   ++   +   +  
Sbjct: 178 HRLSVTEKELSGNISNELNKGVIFPKKGIFELKKMTEEEIGDIMLGFMDNSAVIKKGNTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RLIDGEFP+Y  VIP +NDK +++   +L  ++ R++I+SS + + +KL + +  + 
Sbjct: 238 IVMRLIDGEFPDYTKVIPTNNDKIIKILRESLLHSLRRMAILSSEKFKGIKLDVRNGSVE 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G A E + V Y   P+ + FN +YL++++  +      +DEV   L    S 
Sbjct: 298 ISSSNPELGDAREELEVDYQGEPLSVRFNARYLIDVLTILK-----EDEVELNLRDELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           + ++            K +   V+MPMR+
Sbjct: 353 IIMKPA---------AKNDFMSVIMPMRL 372


>gi|121607000|ref|YP_984329.1| DNA polymerase III subunit beta [Polaromonas naphthalenivorans CJ2]
 gi|120595969|gb|ABM39408.1| DNA polymerase III, beta subunit [Polaromonas naphthalenivorans
           CJ2]
          Length = 368

 Score =  253 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 109/385 (28%), Positives = 199/385 (51%), Gaps = 22/385 (5%)

Query: 3   ITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVD 62
           +   +   L +L     I+ER++T+P+  +VL++     L++  S  EI+I        D
Sbjct: 4   LKATQDKFLGVLQSVAGIVERRHTLPILANVLIRKTGAQLQLTTSDLEIQIRTTAELDGD 63

Query: 63  V-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP-S 120
               + TV A  L D++R +     +S         ++ +  G S F LQ+ P  +FP  
Sbjct: 64  EGDFTTTVGARKLIDVLRSMPSDQTVSLES---AQNKLILKGGKSRFTLQTLPAEDFPLV 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +   +   F +   VLK L+ +  FAMA  +IRYYLNGI F    +  +L  VATDGHR
Sbjct: 121 QEAASFGPVFSVPQKVLKELLNQVSFAMAVHDIRYYLNGILFVAEGK--QLSLVATDGHR 178

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA +   +  ++ K   +I+PRK V E+ R+LS K+ ++++  + ++   + E +    +
Sbjct: 179 LAFSSATLDVEVPKQ-EVILPRKTVLEMQRLLSDKEGAIEMQFAGNQAKFSFEGMEFVTK 237

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L++G+FP+Y  VIP ++   + +    L  ++ R +I++S + + V+L++    L +  +
Sbjct: 238 LVEGKFPDYNRVIPKNHKNIITLGRAPLLASLQRTAILTSEKFKGVRLNIEPGTLRVASN 297

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N +  +A++ +++ Y+   ++I FN  YL++ ++N++      D V   L  SNSS  + 
Sbjct: 298 NAEQEEAVDELDIDYDGDAIEIGFNVTYLIDALNNMN-----QDMVKIELADSNSSALLT 352

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             D  +           YV+MPMRI
Sbjct: 353 IPDNAA---------FKYVVMPMRI 368


>gi|304309654|ref|YP_003809252.1| DNA polymerase sliding clamp subunit (PcnA homolog) [gamma
           proteobacterium HdN1]
 gi|301795387|emb|CBL43585.1| DNA polymerase sliding clamp subunit (PcnA homolog) [gamma
           proteobacterium HdN1]
          Length = 367

 Score =  253 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 201/386 (52%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  V R  IL+ L     ++ER+ T P+  ++LL  +   L +  +  E+E+   I   
Sbjct: 1   MKFKVIREGILKPLQQLAGLVERRQTKPILANILLVLDGNALTLTGTDTEVELRARIQLG 60

Query: 61  VDVC-GSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   G  T+ A  L DI + L +GA++    +++   +  +  G S F L + P  +FP
Sbjct: 61  EEYPFGRATLPAKKLLDICKSLPEGAELLIEADDQ---KALLRSGRSKFSLVALPPDDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
             ++ ++   F +    L+ L+E+T FAMA +++R+YLNG+   ++E    L AVATDGH
Sbjct: 118 DLEDGQFEVQFSIQQRYLRELIEKTGFAMAQQDVRFYLNGMLLEVSEN--NLRAVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+ + DI+ Q A +   +VPRK + EI ++  S D  + +SLS + +      L  + 
Sbjct: 176 RLALGDRDILWQGAGIRQAVVPRKGILEIPKLFGSDDGELLISLSGNHLRAETADLRFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+D ++P Y  V+P   ++ +  +   LRQ + RV I+S+ + + V+L+     L    
Sbjct: 236 KLLDAKYPEYGRVLPKPGERYIVADRDALRQCLLRVGILSNEKFRGVRLTFQCGVLVARA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            NP+  +A ES+ V YN    +I FN  YLL+++  + S     + V   L  +N++  I
Sbjct: 296 SNPEQEEAEESVVVDYNGADTEIAFNIGYLLDVLGVVKS-----ESVSISLADANNTALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           R    D            YV+MPMRI
Sbjct: 351 RETVDD---------KTLYVVMPMRI 367


>gi|121998016|ref|YP_001002803.1| DNA polymerase III subunit beta [Halorhodospira halophila SL1]
 gi|121589421|gb|ABM62001.1| DNA polymerase III, beta subunit [Halorhodospira halophila SL1]
          Length = 366

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 125/385 (32%), Positives = 206/385 (53%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  V+R  +L  L     ++ER+ T+PV  ++ ++A    L++ A+  E+E+   + A+
Sbjct: 1   MRFEVQREPLLAALQSIVGVVERRQTLPVLGNIRVEARSQQLQLTATDLEVELVAYLEAN 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G IT+ A    DI R L +GA IS     +      +    S F L + P  EFP 
Sbjct: 61  TKDEGVITLPARKWLDICRNLPEGASISIEANQD---RATLRAASSRFSLATLPADEFPE 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +      + E+    L+ L+ERTHF+MA  ++RYYLNG+   +        AVATDGHR
Sbjct: 118 VESIGDTEAVEIPRGELRRLIERTHFSMAQHDVRYYLNGLLLELTG--SGARAVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA+AE D   Q+A+   +IVPRK V E+LR+L   D    +    + + + ++S+ ++ +
Sbjct: 176 LALAESDSPVQVAQPRQVIVPRKGVQELLRLLDDADEPATLEFGTNHVRVTLQSVRLTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           LIDG FP+Y  VIP   DK + ++   LRQA+ RV+I+S+ + + ++ ++  D L +   
Sbjct: 236 LIDGVFPDYNRVIPQDGDKHVLIDRQYLRQALTRVAILSNEKYRGIRFAVEGDTLRIGSH 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A E + + Y    +++ FN  YLL+ +  + +     + V   L  ++SS  IR
Sbjct: 296 NPEQEEAEEELGIEYGGEAVELGFNANYLLDALGALDT-----ERVQVTLTDASSSGLIR 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
            +  D         NA YV+MPMR+
Sbjct: 351 AEGSD---------NARYVVMPMRL 366


>gi|262189752|ref|ZP_06048107.1| DNA polymerase III beta subunit [Vibrio cholerae CT 5369-93]
 gi|262034366|gb|EEY52751.1| DNA polymerase III beta subunit [Vibrio cholerae CT 5369-93]
          Length = 353

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 111/359 (30%), Positives = 200/359 (55%), Gaps = 12/359 (3%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK T+ERS +++ L      +  + ++P+  ++LL+  +  L + A+  E+E+   +   
Sbjct: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60

Query: 61  VD-VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
            +   GSITV A    DI R L D A I+   E   G  + +  G S F L + P S+FP
Sbjct: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLE---GDRIQVRSGRSRFSLATLPASDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +      L  + L+ L+E+T F+MA +++RYYLNG+ F I  +   L +VATDGH
Sbjct: 118 NIEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEI--DGTTLRSVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           R+AVA+  + A  A+   IIVPRK V E++++L + +  V + +  S +   +     + 
Sbjct: 176 RMAVAQAQLGADFAQ-KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P    K L+  C  LRQA  R +I+S+ + + V+++L+ +++ +T 
Sbjct: 235 KLVDGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNEMRITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
           +NP+  +A E ++V +   P++I FN  Y+L++++ +       D V   +  +     
Sbjct: 295 NNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRC-----DNVRVSMSDAQRQCL 348


>gi|77358984|ref|YP_338559.1| DNA polymerase III subunit beta [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76873895|emb|CAI85116.1| DNA polymerase III, beta-subunit; processivity clamp of DNA
           polymerase III [Pseudoalteromonas haloplanktis TAC125]
          Length = 367

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+IT+ R   L+ L      IERK+T+P+  +VLL   +G L +  +  EIE+  ++   
Sbjct: 1   MQITISRQQFLKPLVQVSGAIERKHTLPILSNVLLAVENGQLSMTGTDLEIELVASVFVG 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                  +T+ A  L DI + L DG+ ++   +     ++ ++ G S F L +    +FP
Sbjct: 61  DDIADTKLTLPAKKLLDICKSLPDGSDLTLSLQE---HQLLLTSGKSRFSLTTLAAEDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F+L    L+ L+E THF+MA +++RYYLNG+ F    ++  +  VATDGH
Sbjct: 118 NLEQWDGEVEFQLTRLELRKLLESTHFSMANQDVRYYLNGMSFE--VDNTDIKTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A+  +   +     +I+PRK V EI+R++ + +  V +    + I +     + + 
Sbjct: 176 RLAIAQKQLKQSLNTQRQLIIPRKGVQEIMRLMVADEELVTIQFGANHIRIIDIEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  N   LR A  RVSI+S+ + + V+L+LS+  L +T 
Sbjct: 236 KLVDGRFPDYRRVLPRGGDKVITANREWLRSAFQRVSILSNEKFRGVRLNLSNGLLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  Y+L++++ + +     ++V+F L  SNSS  I
Sbjct: 296 NNPEQEQAEEVVEVGYEGADLEIGFNVSYVLDVLNTLKT-----EDVLFTLADSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
            G   +          A YV+MPMR+
Sbjct: 351 EGAGDEE---------AMYVVMPMRL 367


>gi|332533699|ref|ZP_08409558.1| DNA polymerase III beta subunit [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036863|gb|EGI73324.1| DNA polymerase III beta subunit [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 367

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 125/386 (32%), Positives = 212/386 (54%), Gaps = 20/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           M+IT+ R   L+ L      IERK+T+P+  +VLL   +G L +  +  EIE+   +   
Sbjct: 1   MQITISRQQFLKPLVQVSGAIERKHTLPILSNVLLVVENGQLSMTGTDLEIELVSGVFVG 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                  +T+ A  L DI + L DG+ I+   +     ++ ++ G S F L +    +FP
Sbjct: 61  DDIADTKLTLPAKKLLDICKSLPDGSDITLSLQE---HQLLLTSGKSRFSLTTLSADDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           + ++ +    F+L    L+ L+E THF+MA +++RYYLNG+ F    ++  +  VATDGH
Sbjct: 118 NLEQWDGEVEFQLTRLELRKLLESTHFSMANQDVRYYLNGMSFE--VDNTDIKTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLA+A+  +   +     +I+PRK V EI+R++ + D  V +    + I +     + + 
Sbjct: 176 RLAIAQKQLTQSLNTQRQLIIPRKGVQEIMRLMVADDELVTIQFGANHIRIIDIEFTFTS 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P   DK +  N   LR A  RVSI+S+ + + V+L+LS+  L +T 
Sbjct: 236 KLVDGRFPDYRRVLPRGGDKVITANREWLRNAFQRVSILSNEKFRGVRLNLSNGLLKITA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E + V Y    ++I FN  Y+L++++ + +     ++V+F L  SNSS  I
Sbjct: 296 NNPEQEQAEEVVEVSYEGADLEIGFNVSYVLDVLNTLKT-----EDVLFTLADSNSSALI 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
            G   +          A YV+MPMR+
Sbjct: 351 EGAGDEE---------AMYVVMPMRL 367


>gi|187927114|ref|YP_001897601.1| DNA polymerase III subunit beta [Ralstonia pickettii 12J]
 gi|309780181|ref|ZP_07674932.1| DNA polymerase III, beta subunit [Ralstonia sp. 5_7_47FAA]
 gi|187724004|gb|ACD25169.1| DNA polymerase III, beta subunit [Ralstonia pickettii 12J]
 gi|308920884|gb|EFP66530.1| DNA polymerase III, beta subunit [Ralstonia sp. 5_7_47FAA]
          Length = 371

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 117/392 (29%), Positives = 199/392 (50%), Gaps = 28/392 (7%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R ++L  L     I+ER++T+P+  ++L+      +   ++  EI+IT     
Sbjct: 1   MQLVKTSRDNLLRPLQIVSGIVERRHTLPILANLLITKQGERVSFLSTDIEIQITTHADC 60

Query: 60  SVDVCG--SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESE 117
                G  + TV+A  L DI+R + DG       +      + +  G S F LQ+    E
Sbjct: 61  -GAGAGDVATTVAARKLVDILRAMPDGEVALTLNDK----RMTVQSGKSRFALQTLAAEE 115

Query: 118 FPSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVAT 176
           FP+  E  ++     L    LK+L+   HFAMA ++IRYYLNG+      +  ++ AVAT
Sbjct: 116 FPTVAEATDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLV--VDGKQVMAVAT 173

Query: 177 DGHRLAVAEVDI---VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIE 233
           DGHRLA   V+     A       +I+PRK + E+ R+L   D  V V L+ +++     
Sbjct: 174 DGHRLAYCGVETGEQPAGAGGRQEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFG 233

Query: 234 SLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSD 293
           ++ +  +L++G+FP++Q VIP        ++   L+QA+ R +I+++ + + V+  L ++
Sbjct: 234 NIELISKLVEGKFPDFQRVIPKGYRNSFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTN 293

Query: 294 KLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSS 353
            L ++  N D  +A E + + Y    +DI FN  YLL+++ N+ +     ++V   L  S
Sbjct: 294 VLKISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKA-----EKVQVSLGDS 348

Query: 354 NSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           NSS  I   D D+           YV+MPMRI
Sbjct: 349 NSSALITLPDDDT---------FKYVVMPMRI 371


>gi|78484348|ref|YP_390273.1| DNA polymerase III, beta subunit [Thiomicrospira crunogena XCL-2]
 gi|78362634|gb|ABB40599.1| DNA polymerase III, beta subunit [Thiomicrospira crunogena XCL-2]
          Length = 368

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 206/386 (53%), Gaps = 19/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MKI++ R ++L++L     ++E++ T+P+  ++L Q N   L + AS  EIE   +    
Sbjct: 1   MKISLSRENLLKVLQTVGGVVEKRQTMPILANILFQVNQNTLTVTASDLEIETRASTELE 60

Query: 61  V-DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
             D   S+T+ A  L  IVR L DG  I    +        +S G S F L + P  +FP
Sbjct: 61  SSDGDFSVTLPAVKLISIVRSLPDGLTILLEFDE---MRCQLSAGRSRFKLSTLPADDFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +    +   SF +A   LK ++  T FAMA++++R+YLNG+ F I+     L  VATDGH
Sbjct: 118 TIDLTQTELSFSMAQHQLKQIIHNTAFAMASQDVRFYLNGMLFDISN--QTLRVVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RL+     +  +       I+PRK V E+ +++   DS +  SL+++ + +  E    + 
Sbjct: 176 RLSTCSTLLETEGLTATQAILPRKGVLELQKLIGDDDSLIAFSLAKNYLTVQFEETVFTC 235

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP++  V+P  ND+ ++ +   LR  + R +I+S+ + + ++L+LS + L +  
Sbjct: 236 KLVDGRFPDFNRVLPQHNDQLVQTDRELLRSLLQRAAILSNDKFKGIRLALSQNLLAVHA 295

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N D  ++ E M + YN   M+I FN  YLL++++++      ++ V   +  +NSS  +
Sbjct: 296 QNSDQDESHEDMAIDYNGTEMEIGFNVNYLLDVLNSMH-----EEAVTLYMKDANSSCMV 350

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                   + ++   +  +V+MPMR+
Sbjct: 351 --------DTQNETCHCQHVIMPMRL 368


>gi|182412775|ref|YP_001817841.1| DNA polymerase III, beta subunit [Opitutus terrae PB90-1]
 gi|177839989|gb|ACB74241.1| DNA polymerase III, beta subunit [Opitutus terrae PB90-1]
          Length = 374

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 102/394 (25%), Positives = 187/394 (47%), Gaps = 30/394 (7%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  + R      L     ++  K T+P+  +VL++A    + +  +  ++ I   I A 
Sbjct: 1   MKFKINRDHFANGLAQVLNVVGSKATMPILSNVLIEAEKDQISLTTTNLDLGIRCKIKAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G++T+    L  IVR+L +   +    +     +V ++ G SNF +    + EFP 
Sbjct: 61  VKETGAVTLPVKRLATIVRELPN---VDVTVDASPNHQVKLASGGSNFRIMGIGKEEFPP 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E     SF L  S L ++++   +A +T+E RY LNG++F+  +   KL  VATDG R
Sbjct: 118 LPEFGEEKSFTLEQSELTSMLKSVAYAQSTDETRYILNGVYFNFKDG--KLSLVATDGRR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLS---------ESRIHLN 231
           LA+   ++        +II+P K V E++R+L   +                 +      
Sbjct: 176 LALVSKELEVPADSAGAIILPAKTVSELMRLLDKGEKLKINFNDRRAAFQIATDKDSSGL 235

Query: 232 IESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLS 291
           +ES+ +  ++++G +PNYQ V+P    + +++      Q V R +++ S +  +VK+ LS
Sbjct: 236 VESVYLYSKVVEGNYPNYQQVVPKETHQRIKLERELFLQCVHRAALVCSEKSNSVKIKLS 295

Query: 292 SDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLD 351
           S+ L +T  +PD G+A ESM + Y+   + + FN  ++++ +  +       DE+ F L 
Sbjct: 296 SNLLEITAQSPDFGEAHESMAIGYSGPELQVAFNPAFVMDPLRAL-----TKDEIFFELK 350

Query: 352 SSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              S    +  D           +   V+MP+R+
Sbjct: 351 DDVSPGVFKTLD-----------SFLCVIMPVRL 373


>gi|262277741|ref|ZP_06055534.1| DNA polymerase III, beta subunit [alpha proteobacterium HIMB114]
 gi|262224844|gb|EEY75303.1| DNA polymerase III, beta subunit [alpha proteobacterium HIMB114]
          Length = 369

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 109/385 (28%), Positives = 204/385 (52%), Gaps = 17/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  ++R  +L+ L H   ++E+KNT+P+  +VL++A+DG L++ A+  +I IT  +   
Sbjct: 1   MEFKIDRDVLLKSLAHVQGVVEKKNTLPILGNVLIEAHDGFLKLTATDLDIIITEKLTCQ 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               GS T +A ++YDIVRKL+ G+ +      +    + +  G S+F L      EFP 
Sbjct: 61  TIKEGSTTTTAQVIYDIVRKLKTGSSLHLSL--KENNRLKLISGKSDFNLTCISPDEFPI 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            ++       E+ S     ++ +T F+++ +E R+YLNG++    + + KL AVATDGHR
Sbjct: 119 LEDNMDEQYLEIPSFEFLKIINKTKFSISNDETRHYLNGVYLDKKDGENKLIAVATDGHR 178

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           L+ +  +I        S+I+P+K V E+L I+     ++K+  ++S+I    + + +  +
Sbjct: 179 LSKSATEI-KGADNFQSVILPKKTVFELLTIIDEDSINLKILSTKSKIKFLYKDIVLISK 237

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           +IDG+FP+Y+ VIP       + N      A+DR+  +SS R   +K+SL    +   ++
Sbjct: 238 VIDGKFPDYEKVIPKDERIAAKSNVEEFISALDRLKSLSSDRKGVIKISLDKGLMKFLIN 297

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           +   G  IE +   Y    ++I FN  YL+++ + + S      ++V  L  + S + ++
Sbjct: 298 DAISGDGIEEVQTQYQGEHLEIGFNSTYLIDVANVLES-----KDIVLMLKDATSPIQVK 352

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
            +             + Y++MPMR+
Sbjct: 353 DESDPL---------STYIVMPMRV 368


>gi|330813296|ref|YP_004357535.1| DNA polymerase III beta subunit [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486391|gb|AEA80796.1| DNA polymerase III beta subunit [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 371

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 211/386 (54%), Gaps = 17/386 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+I ++R  IL+ L H   ++E+KNT+P+  +VL++A D  ++I A+  +I IT  I A 
Sbjct: 1   MEIKIDRDIILKCLNHIQGVVEKKNTLPILANVLIEAFDNKIQISATDLDIIITEKIDAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   GS T +A +LYD++RKL  G+ I    +N+    + +  G S+F L   P SEFP 
Sbjct: 61  VIKEGSTTTTAQVLYDLIRKLPAGSGIHLNLQNDK--RLKLISGKSDFNLTCLPASEFPI 118

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH-INEEDLKLCAVATDGH 179
            ++       E+ S  L  L+ +T F+++ +E R+YLNGI+ H   E++ KL AVATDGH
Sbjct: 119 LEDSIESDYLEVKSKYLLKLLNKTKFSISNDETRHYLNGIYLHKPEEDNSKLIAVATDGH 178

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RL+  ++ +       P I+  +     I  I    D+ +K+    S+I   I+ + +  
Sbjct: 179 RLSKTQITVDENKKFHPVILPKKTIFEIINIISDEPDTPIKILSVRSKIKFIIKDIVLIS 238

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           ++IDG+FP+Y+ VIP    KE+  N  +   AVDR+  +S+ R   +K+++ + K+   +
Sbjct: 239 KVIDGKFPDYEKVIPSDTRKEVLANVADFISAVDRIKSLSADRKGVIKINIENHKIRFFI 298

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           ++   G+ IE ++  Y    ++I FN  YL++I + I      D+ +  +   + S + I
Sbjct: 299 NDTSSGEGIEEISAVYEGDNLEIGFNSGYLMDIANCIQ-----DENITLKPKDATSPIII 353

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           + +            ++ YV+MPMR+
Sbjct: 354 KDQKD---------PDSTYVVMPMRV 370


>gi|299135925|ref|ZP_07029109.1| DNA polymerase III, beta subunit [Acidobacterium sp. MP5ACTX8]
 gi|298602049|gb|EFI58203.1| DNA polymerase III, beta subunit [Acidobacterium sp. MP5ACTX8]
          Length = 389

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 113/387 (29%), Positives = 195/387 (50%), Gaps = 18/387 (4%)

Query: 2   KITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASV 61
           +ITV R+++L  L  A  ++ERK TIP+  + L +A+D  L I A+  +  +  +  A V
Sbjct: 18  EITVSRAELLRELTAAQSVVERKTTIPILSNFLFEASDEKLTITATDLDQSLKTSCVAKV 77

Query: 62  DVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPST 121
              G+ T+ A  L+D ++ L +G       +      V I  G SN  +     + FP  
Sbjct: 78  KKAGACTIPARKLFDYIKLLPEGD---ISIKLMDNHWVQIRAGRSNTKMVGMARANFPQV 134

Query: 122 KEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRL 181
            E   V  F++ ++ LKN++ +T FA++ EE RY LNG    +  E   +  VATDGHRL
Sbjct: 135 PEFPEVGVFKINAASLKNMIAKTIFAISNEESRYTLNGALLVLKAE--SMAMVATDGHRL 192

Query: 182 AVAEV--DIVAQIAKMPSIIVPRKAVGEILRILSSKDSSV-KVSLSESRIHLNIESLSMS 238
           A  E   + +  I+     ++PRKA+ E+  +L + ++   + +  E  +   I    ++
Sbjct: 193 AHIEKLGEALEGISGEKKTLIPRKALAELSGLLGASETDFVEFADDEQSLFFRIGGRVLT 252

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            R + G+FPNY+ V+P  N K + V   +L  ++ RV+  +  R  A+K+ L  ++L ++
Sbjct: 253 SRKLTGQFPNYEAVLPRDNTKFVIVRSEDLMSSIQRVAQFADERSGAIKIRLEQNELKLS 312

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             + D G++ + +   YN  P+ + FN  YL++ +        V  EV      + S+  
Sbjct: 313 AQSTDAGESEDIIETPYNYDPLVVGFNSSYLVDFLRA----TGVTGEVRLEFKDAQSAGQ 368

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +R +D       +  V   Y+LMPMRI
Sbjct: 369 MRPED------GNEDVKYRYILMPMRI 389


>gi|118578451|ref|YP_899701.1| DNA polymerase III subunit beta [Pelobacter propionicus DSM 2379]
 gi|118501161|gb|ABK97643.1| DNA polymerase III, beta subunit [Pelobacter propionicus DSM 2379]
          Length = 373

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 110/390 (28%), Positives = 198/390 (50%), Gaps = 22/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  +++   L+ L     I+E++ ++P+  +VLL+A +  L + A+  E+ +    PA 
Sbjct: 1   MEFRIDKEVFLKSLQKIQGIVEKRTSMPILSNVLLEATESSLRVTATDLEVGMKCIYPAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G ITV A  +Y+IV++L +       K+N+    V I  G  +F +      EFP 
Sbjct: 61  ILSPGRITVGAKKIYEIVKELPNQQISFSAKDNDW---VEIRCGKVHFNIVGLSAEEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLC---AVATD 177
             E      FE+ S++LK ++E+T +A+  ++ +Y LNG+F      D  +     VATD
Sbjct: 118 FPEVHEENLFEIESALLKGMIEKTSYAICNDDTKYNLNGLFAKTEINDDDVQLLKMVATD 177

Query: 178 GHRLAVAEVDIVAQIAKMPS--IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESL 235
           GHRL++A         +  S  +I+P+K V E+ +I      ++     ++   +     
Sbjct: 178 GHRLSIASCPFKGNAGQELSKGVILPKKGVYELKKIAEEDGGTLMFGFMDNSAVIKRGDS 237

Query: 236 SMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKL 295
            M +RL+DGEFP+Y  VIP SND+ + +NC +   +V R++I+SS + + + L +S   +
Sbjct: 238 YMVMRLVDGEFPDYNRVIPTSNDRSIIINCDDFTHSVRRMAILSSEKFKGIMLDISESSI 297

Query: 296 CMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
            ++  NP++G A+E ++V Y   P  + FN +YLL+++    +     + V  +     +
Sbjct: 298 RISSSNPELGDAMEEIDVSYGGEPFSVRFNARYLLDVLAVTET-----ESVEMKFKDELA 352

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              I     DS            V+MPMR+
Sbjct: 353 PSIILPDKSDS---------FLAVIMPMRL 373


>gi|238898808|ref|YP_002924490.1| DNA polymerase III, beta-subunit [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229466568|gb|ACQ68342.1| DNA polymerase III, beta-subunit [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 368

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 123/388 (31%), Positives = 212/388 (54%), Gaps = 23/388 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA- 59
           MK  +ER  +L+ L      +  + T+P+  ++LLQ N+ +L + A+  ++E+   +   
Sbjct: 1   MKFIIEREHLLKPLQQVISPLSARPTMPILGNLLLQVNENVLFLTATDLQMEMVVRVVLS 60

Query: 60  --SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESE 117
              +   GS TV A   +DI R L +G+ I+   +   G  + +  G S F L + P S 
Sbjct: 61  HSDLHESGSTTVPARKFFDIWRGLLEGSTITVTLD---GDRLLVYSGRSRFSLSTLPSSG 117

Query: 118 FPSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           FP   + +   +F L    LK L++ T F+MA +++RYYLNG+ F    +  +L  VATD
Sbjct: 118 FPGLDDWKTQVAFSLPQETLKKLIDATQFSMAHQDVRYYLNGMLFETENK--ELRTVATD 175

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLAV  +     +    S+IVPRK V E+ R+L +    VK+ + E  I  ++++L+ 
Sbjct: 176 GHRLAVCSMSTDETLPSY-SVIVPRKGVIELGRLLEASVHPVKLHIGEHNIRAHLDNLTF 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
           + +LID  FP+Y+ V+P + +K L   C  L+QA  RV+I+S+ + + V+L LS +++ +
Sbjct: 235 TCKLIDARFPDYRRVLPKNPNKILEAKCDLLKQAFSRVAILSNEKFRGVRLYLSHNQMKI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
           T +NP+  +A E +++ Y    ++I  N  Y+L+I++ +       D+V F L ++ SS+
Sbjct: 295 TANNPEQEEAEEILDIEYEGEELEIGLNVSYILDILNILKC-----DKVRFLLINAASSL 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I        +         Y+LMPMR+
Sbjct: 350 QIEDHSSQMVS---------YILMPMRL 368


>gi|319790696|ref|YP_004152336.1| DNA polymerase iii, beta subunit [Variovorax paradoxus EPS]
 gi|315593159|gb|ADU34225.1| DNA polymerase III, beta subunit [Variovorax paradoxus EPS]
          Length = 368

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 107/385 (27%), Positives = 194/385 (50%), Gaps = 22/385 (5%)

Query: 3   ITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVD 62
           +   +  +L  L     I+ER++T+P+  +VL++   G L++  S  EI+I        D
Sbjct: 4   LKATQDKVLAALQSVSGIVERRHTLPILANVLIRKTGGQLQLTTSDLEIQIRTTAELGGD 63

Query: 63  V-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP-S 120
               + T+ A  L DI+R +     +S        +++ +  G S F LQS P  +FP  
Sbjct: 64  EGNFTTTIGARKLIDILRTMPADQTVSLES---SASKLVLKGGKSRFTLQSLPAEDFPLV 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +   +   F +    LK+L+ +  FAMA  +IRYYLNGI F    +  +L  VATDGHR
Sbjct: 121 QEAANFGPVFSVPQKTLKDLLSQVSFAMAVHDIRYYLNGILFVAEGK--QLSLVATDGHR 178

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA +   +  ++     +I+PRK V E+ R+LS  + ++++  + ++   +   +    +
Sbjct: 179 LAFSSAMLDVEVP-RQEVILPRKTVLEMQRLLSDAEGAIEMQFANNQAKFSFGGMEFVTK 237

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L++G+FP+Y  VIP ++   + +    L  ++ R +I++S + + V+L++    L +  +
Sbjct: 238 LVEGKFPDYNRVIPKNHKNTVTLGRAPLLASLQRTAILTSEKFKGVRLNIEPGTLRIASN 297

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N +  +A + +++ Y    ++I FN  YL++ + N+       D V   L  SNSS  + 
Sbjct: 298 NAEQEEAQDELDIDYGGDAIEIGFNVTYLIDALSNMD-----QDMVKLDLADSNSSALLT 352

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             +  S           YV+MPMRI
Sbjct: 353 IPENAS---------FKYVVMPMRI 368


>gi|239813021|ref|YP_002941931.1| DNA polymerase III, subunit beta [Variovorax paradoxus S110]
 gi|239799598|gb|ACS16665.1| DNA polymerase III, beta subunit [Variovorax paradoxus S110]
          Length = 368

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 107/385 (27%), Positives = 194/385 (50%), Gaps = 22/385 (5%)

Query: 3   ITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVD 62
           +   +  +L  L     I+ER++T+P+  +VL++   G L++  S  EI+I        D
Sbjct: 4   LKATQDKVLAALQSVAGIVERRHTLPILANVLIRKTGGQLQLTTSDLEIQIRTTAELGGD 63

Query: 63  V-CGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP-S 120
               + T+ A  L DI+R +     +S        +++ +  G S F LQS P  +FP  
Sbjct: 64  EGNFTTTIGARKLIDILRTMPADQTVSLES---SASKLVLKGGKSRFTLQSLPAEDFPLV 120

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
            +   +   F +    LK+L+ +  FAMA  +IRYYLNGI F    +  +L  VATDGHR
Sbjct: 121 QEAANFGPVFSVPQKTLKDLLSQVSFAMAVHDIRYYLNGILFVAEGK--QLSLVATDGHR 178

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA +   +  ++     +I+PRK V E+ R+LS  + ++++  + ++   +   +    +
Sbjct: 179 LAFSSATLDVEVP-RQEVILPRKTVLEMQRLLSDAEGAIEMQFANNQAKFSFGGMEFVTK 237

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L++G+FP+Y  VIP ++   + +    L  ++ R +I++S + + V+L++    L +  +
Sbjct: 238 LVEGKFPDYNRVIPKNHKNSVTLGRAPLLASLQRTAILTSEKFKGVRLNIEPGTLRIASN 297

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           N +  +A + +++ Y    ++I FN  YL++ + N+       D V   L  SNSS  + 
Sbjct: 298 NAEQEEAQDELDIDYGGDAIEIGFNVTYLIDALSNMD-----QDMVKLDLADSNSSALLT 352

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
             +  S           YV+MPMRI
Sbjct: 353 IPENAS---------FKYVVMPMRI 368


>gi|288939766|ref|YP_003442006.1| DNA polymerase III subunit beta [Allochromatium vinosum DSM 180]
 gi|288895138|gb|ADC60974.1| DNA polymerase III, beta subunit [Allochromatium vinosum DSM 180]
          Length = 366

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 201/385 (52%), Gaps = 19/385 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+    R  +L  L     ++ER+ T+P+  ++L+ A  G + +  +  E+E+  +  A 
Sbjct: 1   MEFVANREIVLPALNKVIGVVERRQTLPILGNLLVVARAGRVTLTGTDLEVEVKTSFEAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G  T+ A  L DI R L +GA+I    ++E      ++ G   F L   P ++FP+
Sbjct: 61  IQQEGETTIPARKLVDICRNLSEGAEIRLRVKDE---RCVVTSGRGRFTLGLLPAADFPT 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
              EE  + F++  S LK L+++T FAMA +++RYYLNG+   ++     L AVATDGHR
Sbjct: 118 MDLEEGGFDFQIQESQLKRLLDKTAFAMAQQDVRYYLNGLLLELHA--TVLIAVATDGHR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVR 240
           LA     +   +     +IVP K V E+ R L S D  + + LSE  + + + +++M+ +
Sbjct: 176 LAKFVTPLDLTLDTERQVIVPNKTVMELKRQLGSSDDPISIRLSERSLRVVVGAMTMTSK 235

Query: 241 LIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVD 300
           L+DG +P Y+ VIP  + +   V    L++A+ R SI+S+ + + V+LS     L +   
Sbjct: 236 LVDGRYPEYERVIPGHSGRTATVEKDALKRALSRTSILSNEKYRGVRLSFDPGTLKLLAH 295

Query: 301 NPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360
           NP+  +A E + + Y+  P+ I FN  YL++++  I         V+     +N S   R
Sbjct: 296 NPEQEEAEEEIELEYDGEPISIGFNVAYLMDVLGVIDETA-----VIIHFQDANGSSIWR 350

Query: 361 GKDKDSKNNKDNKVNAFYVLMPMRI 385
           G   +S+          +V+MPMR+
Sbjct: 351 GVGGESE---------TFVVMPMRL 366


>gi|330994265|ref|ZP_08318193.1| DNA polymerase III subunit beta [Gluconacetobacter sp. SXCC-1]
 gi|329758732|gb|EGG75248.1| DNA polymerase III subunit beta [Gluconacetobacter sp. SXCC-1]
          Length = 380

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 144/390 (36%), Positives = 214/390 (54%), Gaps = 21/390 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+  +R  +L+ L H   + E++NTIP+  +VL+   DG + + A+  EI +   + A 
Sbjct: 7   MKLKADRVTLLKALAHIQSVAEKRNTIPILANVLINVVDGAMTLTATDMEIAVVEGVAAE 66

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G++T  A +LY+IVRKL DGAQ+           + +  G     L      +FPS
Sbjct: 67  TQRDGAVTAPAAVLYEIVRKLPDGAQVELDHAGGDAP-LGLRAGRFATSLNVLDVDDFPS 125

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
                  + F + + VL+ L++RT FA++TEE RYYLNGIF H+ E +    L AVATDG
Sbjct: 126 MMAGALPHEFSMPAQVLRGLIDRTRFAISTEETRYYLNGIFLHVAEGETGPVLRAVATDG 185

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRLA  E ++ A  A MP +IVPRK V E+ ++L      V V+LS++RI  +I +++++
Sbjct: 186 HRLARVETELPAGSAGMPGVIVPRKTVAELRKLLDEGPEQVAVALSDTRIQFSIGNITLT 245

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
            +LIDG FP Y+ VIP  NDK LRV       AV RV+ +S  R + VKLS+  + L ++
Sbjct: 246 SKLIDGTFPEYERVIPHGNDKILRVGKKIFSDAVSRVAAISQERSRPVKLSMGHNLLTLS 305

Query: 299 VDNPDMGKAIESMN---VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355
             + D G A E ++   V Y   P++I F  +YL +I D +        EV F    S++
Sbjct: 306 AASQDQGTATEELDENHVSYAASPIEIGFQARYLNDITDQVER------EVEFAFSDSSA 359

Query: 356 SVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +R  D           +A YVLMPMR+
Sbjct: 360 PTIVRDVD---------SPSALYVLMPMRV 380


>gi|149925375|ref|ZP_01913639.1| DNA polymerase III subunit beta [Limnobacter sp. MED105]
 gi|149825492|gb|EDM84700.1| DNA polymerase III subunit beta [Limnobacter sp. MED105]
          Length = 368

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 121/388 (31%), Positives = 208/388 (53%), Gaps = 23/388 (5%)

Query: 1   MKIT-VERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++    R  ++  L     I+ER+NT+PV  ++LL+   GLL + +S  E++I  +   
Sbjct: 1   MELIHSSRDALVRKLQIVSNIVERRNTLPVLANILLKKQGGLLTLLSSDIEMQIETSAEV 60

Query: 60  S-VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
                  + TV+A    DI+R L + + +    +   G ++++    S F LQ+ P  +F
Sbjct: 61  GAGGEDTATTVAARKFLDILRSLPEDSDVMVKLD---GKKMSVQAKKSRFALQTLPAEDF 117

Query: 119 P-STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P   + +E+V    L   +LKNL+   HF+MA +++RYYLNG+   I  E   + AVATD
Sbjct: 118 PLVQEPKEWVTQISLPQKMLKNLLGMVHFSMAQQDLRYYLNGVLLVI--ESACVRAVATD 175

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA A+       AK   +I+PRK V E+ R+L+  D +V + L+ ++       +++
Sbjct: 176 GHRLAYADAPGQGGTAKH-EVIIPRKTVLELSRLLNDTDDTVTIDLASNQAKFTFSDITL 234

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP+YQ VIP ++   + +    L  ++ R SI++S + + ++  L ++ L +
Sbjct: 235 ITKLVEGKFPDYQRVIPKTHQHHVVIARDALLHSLQRASILTSDKFRGIRWVLGANGLTI 294

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
             +N D  +A + M V Y    +D+ FN  YLL++++N+ S     + V F L   NSS 
Sbjct: 295 VANNSDQEEARDEMEVEYQGPEIDVGFNVNYLLDVLNNLKS-----ETVQFTLQDGNSSA 349

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            +    KD         +  YV+MPMRI
Sbjct: 350 LVTTPGKD---------DFKYVVMPMRI 368


>gi|307728078|ref|YP_003905302.1| DNA polymerase III subunit beta [Burkholderia sp. CCGE1003]
 gi|307582613|gb|ADN56011.1| DNA polymerase III, beta subunit [Burkholderia sp. CCGE1003]
          Length = 367

 Score =  251 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER ++L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGETVATTVAARKLLDILRAMPDGQVTLTLNDK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + ++Y  S  +     + L+   HF+MA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDYGASLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I    A    +I+PRK + E+ R+L   D ++K+ ++++++      + +
Sbjct: 175 GHRLAFSSMKIEGSFA-RQEVIIPRKTILELQRLLEDIDDTLKIDIAQTQVKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP S+  +  +    L++++ R +I++S + + V+  +   +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKSHKNQFVIGREELQRSLQRAAILTSDKFKGVRCIIEPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y+   +DI FN  YLL+++ N+       D +   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYDGDSVDIGFNVTYLLDVLANLK-----VDMLQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITIPENDE---------FKYVVMPMRI 367


>gi|302341688|ref|YP_003806217.1| DNA polymerase III, subunit beta [Desulfarculus baarsii DSM 2075]
 gi|301638301|gb|ADK83623.1| DNA polymerase III, beta subunit [Desulfarculus baarsii DSM 2075]
          Length = 370

 Score =  251 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 194/387 (50%), Gaps = 19/387 (4%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M++T  + D+   L  +  ++E++ ++P+  +VLL+A DG L + A+  EI   G++ A 
Sbjct: 1   MELTARKEDLARNLQKSQSVVEKRTSMPILSNVLLEAADGGLTVTATDLEISFQGSLEAK 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V+  G +TV A   Y+I+++L        + + +    ++++ G +++ L     +++P+
Sbjct: 61  VNKPGRVTVPARKFYEIIKELPSDD---VYLKEKENQHIHLTGGRASYDLVGLSAADYPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
             +   +   E+   VL  ++E+T F+++ E+ R+ L G+F      ++   L  V+TDG
Sbjct: 118 LPDIADLSCLEVDGDVLGEMIEKTIFSISQEDTRFNLAGLFVQKRRRDDREILRMVSTDG 177

Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
           HRL++ + +I    A   +  V     G       ++D  + + L+ S   +  +  ++ 
Sbjct: 178 HRLSLIDREIPGLAALDIAGGVIIPRKGVAEMRRLAEDGGLSLGLNASFAVVKKDGATLI 237

Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
           +R+ +G FP+Y+ V+P +  +   VN     + + RVSI+++ R Q V+LS     L + 
Sbjct: 238 LRMQEGSFPDYEVVVPKNAGRVALVNRQAFGEVIRRVSILATDRFQGVQLSFKEGLLELI 297

Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
             NPD+G+A E++ V Y      + FN +Y L++   + S     + +       N+   
Sbjct: 298 SQNPDLGEARETIEVDYEGESFTVGFNARYFLDLCGAMRS-----EVISLAFVDENNPCL 352

Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           I+G+  +             V+MPMR+
Sbjct: 353 IKGEGDE---------GFLSVIMPMRL 370


>gi|253698658|ref|YP_003019847.1| DNA polymerase III subunit beta [Geobacter sp. M21]
 gi|251773508|gb|ACT16089.1| DNA polymerase III, beta subunit [Geobacter sp. M21]
          Length = 372

 Score =  251 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 201/389 (51%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+  + +   ++ L     I+E++NT+P+  + LL+  +  L I A+  E+ +  + P +
Sbjct: 1   MEFRISKEIFMKALQRIQGIVEKRNTMPILSNALLEVQNDQLFITATDLEVGMKSSYPTA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
               G ITVSA  LY+IV+++ D       K+N+    V I+ G + F +      EFP 
Sbjct: 61  AIREGKITVSAKKLYEIVKEMPDEEIHFTTKDNDW---VEITCGKARFNIVGLSSEEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHI--NEEDLKLCAVATDG 178
             + +        + +L +++E+T +A+  +E +Y LNG+F        +  L  VATDG
Sbjct: 118 FPKVKEESFLVFKNEILADMIEKTSYAICYDETKYNLNGVFIKAFDENGENVLKMVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPS--IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL+V++  I   I    S  +I P+K + E+ +++  +   + +   ++   +   +  
Sbjct: 178 HRLSVSQKAITGNITSELSKGVIFPKKGIFELKKMVEEESGEIMLGFMDNSAVIKKGNTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RLIDGEFP+Y  VIP SND+ +++N      ++ R++I+SS + + VK+ ++ + + 
Sbjct: 238 VVMRLIDGEFPDYTKVIPASNDRIVQINRDKFLHSLKRMAILSSEKFKGVKIEVNPELVI 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G+A E + V Y    +   FN KYL++++  +        EV  +L    S 
Sbjct: 298 ISSSNPELGEAREEIEVQYEGNSISARFNAKYLIDVLSVMEQR-----EVELKLKDELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           V ++   ++             V+MPMR+
Sbjct: 353 VIMKAAAEEE---------FLAVIMPMRL 372


>gi|150387855|ref|YP_001317904.1| DNA polymerase III subunit beta [Alkaliphilus metalliredigens QYMF]
 gi|149947717|gb|ABR46245.1| DNA polymerase III, beta subunit [Alkaliphilus metalliredigens
           QYMF]
          Length = 368

 Score =  251 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 87/386 (22%), Positives = 175/386 (45%), Gaps = 22/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M  +  +  ++  +    + +  K T+P+   + ++ N+  L +  +  EI I   + A 
Sbjct: 1   MHFSCSQKALMHSISIVQKGVSAKTTLPILKGIYIETNNEGLRLVGTDLEIGIEHVMEAD 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G + V A L  +I+RKL D       KE     ++ I    + F +  +   EFP 
Sbjct: 61  VLQEGIVVVDARLFSEIIRKLPDAEVDITLKE---NNQLEIKCASTEFNILVYSPDEFPE 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
               E    +E+A  + K ++ +T FA + +E R  L G+   I E    L  VA DG+R
Sbjct: 118 LPIVEEDQVYEIAQELFKGMIRQTVFATSQDESRPILTGVLMEIEEN--TLNMVALDGYR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSV-KVSLSESRIHLNIESLSMSV 239
           LA+ +  I         ++VP K + E+ RIL+  +     ++L+ +          +  
Sbjct: 176 LALRKGKISGNSN--HKVVVPAKTLNEVNRILNPDEEEPLHITLTNNHALFTAGKTKLIS 233

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           RL++GEF NY+ ++P  +  ++ +    +  +++R S+++      +   + +D+  +  
Sbjct: 234 RLLEGEFINYKQILPKEHRSKVTIKGKEILNSIERASLLAKEGRNNLVRFVVNDEKMVIT 293

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N ++GK  E +N+      ++I FN KY ++ +  I      D+EV     ++ S   +
Sbjct: 294 SNSELGKVHEEINIVLEGEDIEIAFNSKYFIDALKVID-----DEEVCLEFTTNLSPGIL 348

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
           +    +         N  Y+++P+R+
Sbjct: 349 KPLANE---------NYTYLVLPVRL 365


>gi|323524379|ref|YP_004226532.1| DNA polymerase III subunit beta [Burkholderia sp. CCGE1001]
 gi|323381381|gb|ADX53472.1| DNA polymerase III, beta subunit [Burkholderia sp. CCGE1001]
          Length = 367

 Score =  251 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER ++L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGESVATTVAARKLLDILRAMPDGQVTLTLNDK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + ++Y  S  +     + L+   HF+MA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDYGASLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I    A    +I+PRK + E+ R+L   D ++K+ ++++++      + +
Sbjct: 175 GHRLAFSSMKIEGSFA-RQEVIIPRKTILELQRLLEDIDDTLKIDIAQTQVKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP S+  +  +    L++++ R +I++S + + V+  +   +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKSHKNQFVIGREELQRSLQRAAILTSDKFKGVRCIIEPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y+   +DI FN  YLL+++ N+       D +   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYDGDSVDIGFNVTYLLDVLANLK-----VDMLQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITIPENDE---------FKYVVMPMRI 367


>gi|53717713|ref|YP_106699.1| DNA polymerase III subunit beta [Burkholderia pseudomallei K96243]
 gi|53724902|ref|YP_101863.1| DNA polymerase III subunit beta [Burkholderia mallei ATCC 23344]
 gi|67642368|ref|ZP_00441125.1| DNA polymerase III, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|76811898|ref|YP_331716.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 1710b]
 gi|121599744|ref|YP_994143.1| DNA polymerase III subunit beta [Burkholderia mallei SAVP1]
 gi|124384769|ref|YP_001028200.1| DNA polymerase III subunit beta [Burkholderia mallei NCTC 10229]
 gi|126438733|ref|YP_001057143.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 668]
 gi|126448071|ref|YP_001079585.1| DNA polymerase III subunit beta [Burkholderia mallei NCTC 10247]
 gi|134281596|ref|ZP_01768304.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 305]
 gi|167001181|ref|ZP_02266980.1| DNA polymerase III, beta subunit [Burkholderia mallei PRL-20]
 gi|167717461|ref|ZP_02400697.1| DNA polymerase III subunit beta [Burkholderia pseudomallei DM98]
 gi|167736496|ref|ZP_02409270.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 14]
 gi|167813574|ref|ZP_02445254.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 91]
 gi|167822115|ref|ZP_02453586.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 9]
 gi|167843720|ref|ZP_02469228.1| DNA polymerase III subunit beta [Burkholderia pseudomallei B7210]
 gi|167892199|ref|ZP_02479601.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 7894]
 gi|167900711|ref|ZP_02487916.1| DNA polymerase III subunit beta [Burkholderia pseudomallei NCTC
           13177]
 gi|167908928|ref|ZP_02496019.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 112]
 gi|167916969|ref|ZP_02504060.1| DNA polymerase III subunit beta [Burkholderia pseudomallei BCC215]
 gi|217423948|ref|ZP_03455448.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 576]
 gi|226193089|ref|ZP_03788699.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237814479|ref|YP_002898930.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei
           MSHR346]
 gi|254175303|ref|ZP_04881964.1| DNA polymerase III, beta subunit [Burkholderia mallei ATCC 10399]
 gi|254184147|ref|ZP_04890738.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1655]
 gi|254186618|ref|ZP_04893135.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194524|ref|ZP_04900955.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei S13]
 gi|254201968|ref|ZP_04908332.1| DNA polymerase III, beta subunit [Burkholderia mallei FMH]
 gi|254207300|ref|ZP_04913651.1| DNA polymerase III, beta subunit [Burkholderia mallei JHU]
 gi|254259557|ref|ZP_04950611.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1710a]
 gi|254298587|ref|ZP_04966038.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 406e]
 gi|254359609|ref|ZP_04975880.1| DNA polymerase III, beta subunit [Burkholderia mallei 2002721280]
 gi|52208127|emb|CAH34057.1| DNA polymerase III, beta chain [Burkholderia pseudomallei K96243]
 gi|52428325|gb|AAU48918.1| DNA polymerase III, beta subunit [Burkholderia mallei ATCC 23344]
 gi|76581351|gb|ABA50826.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1710b]
 gi|121228554|gb|ABM51072.1| DNA polymerase III, beta subunit [Burkholderia mallei SAVP1]
 gi|124292789|gb|ABN02058.1| DNA polymerase III, beta subunit [Burkholderia mallei NCTC 10229]
 gi|126218226|gb|ABN81732.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 668]
 gi|126240941|gb|ABO04034.1| DNA polymerase III, beta subunit [Burkholderia mallei NCTC 10247]
 gi|134247263|gb|EBA47349.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 305]
 gi|147747862|gb|EDK54938.1| DNA polymerase III, beta subunit [Burkholderia mallei FMH]
 gi|147752842|gb|EDK59908.1| DNA polymerase III, beta subunit [Burkholderia mallei JHU]
 gi|148028823|gb|EDK86755.1| DNA polymerase III, beta subunit [Burkholderia mallei 2002721280]
 gi|157808569|gb|EDO85739.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 406e]
 gi|157934303|gb|EDO89973.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|160696348|gb|EDP86318.1| DNA polymerase III, beta subunit [Burkholderia mallei ATCC 10399]
 gi|169651274|gb|EDS83967.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei S13]
 gi|184214679|gb|EDU11722.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1655]
 gi|217393011|gb|EEC33033.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 576]
 gi|225934689|gb|EEH30666.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506469|gb|ACQ98787.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei
           MSHR346]
 gi|238523507|gb|EEP86945.1| DNA polymerase III, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|243063008|gb|EES45194.1| DNA polymerase III, beta subunit [Burkholderia mallei PRL-20]
 gi|254218246|gb|EET07630.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1710a]
          Length = 367

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 200/388 (51%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--RLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +VK+ +++++       + +
Sbjct: 175 GHRLAFSSMKIE-GSFGRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITVPENDE---------FKYVVMPMRI 367


>gi|167834928|ref|ZP_02461811.1| DNA polymerase III subunit beta [Burkholderia thailandensis MSMB43]
          Length = 367

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 200/388 (51%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--RLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +VK+ +++++       + +
Sbjct: 175 GHRLAFSSMKIE-GAFGRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITVPENDE---------FKYVVMPMRI 367


>gi|297537199|ref|YP_003672968.1| DNA polymerase III subunit beta [Methylotenera sp. 301]
 gi|297256546|gb|ADI28391.1| DNA polymerase III, beta subunit [Methylotenera sp. 301]
          Length = 366

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M I + R  +L+ L     I+E+++T+P+  ++LL+A    + + A+  E++I+ +I ++
Sbjct: 1   MNIQINRETLLKPLTSVTSIVEKRHTLPILSNLLLEAKQNKIHLTATDLEMQISLSIESA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
                S T+SA  L DI R L D ++I+    +     + +  G S F LQ+ P +++P 
Sbjct: 61  TTGDFSTTISAKKLLDICRSLPDSSEINMATNDS---RITLKAGKSRFNLQTLPAADYPV 117

Query: 121 TKEEEYVYS-FELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
             + +   +   +    LK+L+++  FAMA ++IRYYLNG+ F +     +L  V TDGH
Sbjct: 118 MTKTQGESTLVTIGQRQLKDLLKQVEFAMAQQDIRYYLNGLLFEVVAN--RLNIVGTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RL+    ++     K   +I+PRK V E++++L   D  V++ L+ ++++ +     +  
Sbjct: 176 RLSFTSTELKQNYDKQ-DVILPRKTVIELIKLLDDSDEDVQIELASNQVNFSFSHFKLIS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           ++IDG+FP+Y  VIP  +      +   +  A+ R SI+S+ + + +++ LS++ L +  
Sbjct: 235 KVIDGKFPDYNRVIPTGHQNSFTTDRVGVLLAMQRASILSNEKYRGIRMVLSNNNLKLIS 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N D  +A E + + Y    +DI FN  YL+++++N SS     ++  F    +NSS  I
Sbjct: 295 TNSDQEEAEEELEIDYAGDSLDIGFNVTYLIDVLNNTSS-----EQATFSFADANSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           +  YV+MPMRI
Sbjct: 350 TVPNN---------TDYKYVVMPMRI 366


>gi|83720585|ref|YP_443734.1| DNA polymerase III subunit beta [Burkholderia thailandensis E264]
 gi|167582969|ref|ZP_02375843.1| DNA polymerase III subunit beta [Burkholderia thailandensis TXDOH]
 gi|167620900|ref|ZP_02389531.1| DNA polymerase III subunit beta [Burkholderia thailandensis Bt4]
 gi|83654410|gb|ABC38473.1| DNA polymerase III, beta subunit [Burkholderia thailandensis E264]
          Length = 367

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 201/388 (51%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--RLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I    +    +IVPRK + E+ R+L   D +VK+ +++++       + +
Sbjct: 175 GHRLAFSSMKIEGSFS-RQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITVPENDE---------FKYVVMPMRI 367


>gi|126451494|ref|YP_001064387.1| DNA polymerase III subunit beta [Burkholderia pseudomallei 1106a]
 gi|242316207|ref|ZP_04815223.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1106b]
 gi|126225136|gb|ABN88676.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1106a]
 gi|242139446|gb|EES25848.1| DNA polymerase III, beta subunit [Burkholderia pseudomallei 1106b]
          Length = 367

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +   L AVATD
Sbjct: 117 PTVAQSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--SLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +VK+ +++++       + +
Sbjct: 175 GHRLAFSSMKIE-GSFGRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITVPENDE---------FKYVVMPMRI 367


>gi|74316020|ref|YP_313760.1| DNA polymerase III subunit beta [Thiobacillus denitrificans ATCC
           25259]
 gi|74055515|gb|AAZ95955.1| DNA polymerase III, beta chain [Thiobacillus denitrificans ATCC
           25259]
          Length = 367

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 214/384 (55%), Gaps = 21/384 (5%)

Query: 3   ITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVD 62
           I  ER+ +L  L     ++ER++T+P+  ++LL+   G L + A+  E++++  + A   
Sbjct: 4   IQSERNALLSALSAVVGVVERRHTLPILSNLLLEKKAGTLTLLATDLELQVSTRLEAQGG 63

Query: 63  VCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTK 122
              +IT++A  L+DIVR L D A +    ++    +V +S G S F LQ+ P ++FP  +
Sbjct: 64  DDFAITIAARKLFDIVRALPDSASVKLDTKDS---QVVVSAGKSRFTLQTLPAADFPRVE 120

Query: 123 EEEYVYS-FELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRL 181
               V +   L    LK L++   FAMA+++IRYYLNG+      +  +L  VATDGHRL
Sbjct: 121 TGAGVGTVVRLPQKTLKRLLQLVQFAMASQDIRYYLNGMLLV--LDGQQLRVVATDGHRL 178

Query: 182 AVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVRL 241
           + AE  + A       +I+PRK V E+ ++LS  D  V++ +  +++ + +    +  ++
Sbjct: 179 SYAETTLDAPTDAQ-EVIIPRKTVIELSKLLSDSDEPVELRIGSNQVTIMLPGTELVTKV 237

Query: 242 IDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDN 301
           +DG+FP+YQ VIP +  + L+ N   + QA+ R +I+S+ + + V+L +S + L +  +N
Sbjct: 238 VDGKFPDYQRVIPANQPRHLKANRQTVVQALQRAAILSNEKFRGVRLVMSDNTLGIVCNN 297

Query: 302 PDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRG 361
            +  +A + + V YN  P+D+ FN  YLL+ +  +++     DE+   L  +NSS+ +  
Sbjct: 298 NEQEEAADEIEVSYNGDPLDVGFNVTYLLDGLGAVNT-----DEITLSLGDANSSMLLTS 352

Query: 362 KDKDSKNNKDNKVNAFYVLMPMRI 385
           + +             YV+MPMRI
Sbjct: 353 EGE---------PGFKYVVMPMRI 367


>gi|167560989|ref|ZP_02353905.1| DNA polymerase III subunit beta [Burkholderia oklahomensis EO147]
 gi|167568253|ref|ZP_02361127.1| DNA polymerase III subunit beta [Burkholderia oklahomensis C6786]
          Length = 367

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER  +L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDQVATTVAARKLLDILRAMPDGQVTLTLADK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  S  +     + L+   +FAMA ++IRYYLNG+   ++ +   L AVATD
Sbjct: 117 PTVAQAKDFGASLSVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGD--SLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I         +IVPRK + E+ R+L   D +VK+ +++++       + +
Sbjct: 175 GHRLAFSSMKIE-GAFPRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP ++     +    L++++ R +I++S + + V+  ++  +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKAHKNSFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y    +DI FN  YLL+++ N+       D V   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLK-----VDTVQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITVPENDE---------FKYVVMPMRI 367


>gi|302035396|ref|YP_003795718.1| DNA polymerase III subunit beta [Candidatus Nitrospira defluvii]
 gi|300603460|emb|CBK39790.1| DNA polymerase III, beta subunit [Candidatus Nitrospira defluvii]
          Length = 376

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 107/393 (27%), Positives = 185/393 (47%), Gaps = 25/393 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK+ + R ++L  L     ++E++NT+P+  ++LL+A     EI A+  EI + G   A+
Sbjct: 1   MKVRIGREELLTGLQRVQGVVEKRNTMPILSNILLEAKHDGAEIVATDLEIGMRGLYKAT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   G +T+SA  LY+I+++L  G        +       I  G S F +   P  ++P+
Sbjct: 61  VLEAGGVTISARKLYEIIKELPSGE---IELTSGDNNWTTIQSGKSQFKVVGLPSGDYPA 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH---INEEDLKLCAVATD 177
               E      LA + L  L+ +T FA    + RY LNG+        ++   L  V TD
Sbjct: 118 LPSIEREGLTPLAGAGLLELIRKTLFAAGDNDARYILNGLLVSLTTTEKKTTLLRLVGTD 177

Query: 178 GHRLAVAEVDI-----VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI 232
           GHRLAVAE ++           + +II  + A      +    D    +  +++ +    
Sbjct: 178 GHRLAVAEREVGTPNAKQPAQDIKAIIPKKAAQEMRRLLEEGGDEEPLIGFTKNLMIFRK 237

Query: 233 ESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSS 292
             L ++ RL++G +PNYQ V+P  + K + VN   L  A+ RVS++S  +  AVK+S + 
Sbjct: 238 SGLLLTSRLMEGNYPNYQQVVPKESGKRIAVNRGLLESALRRVSVLSKDKANAVKVSFAP 297

Query: 293 DKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDS 352
             + +   NPD G+A E +   Y    +   FN +YLL+ +  +       + V  ++D+
Sbjct: 298 GGMTLFSSNPDYGEATEELVARYEGEALHTGFNARYLLDALSVMDG-----ESVSLQMDT 352

Query: 353 SNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           + S   I+  +               V+MP++I
Sbjct: 353 ALSPCLIQEAE---------SPGFKCVVMPIKI 376


>gi|253995376|ref|YP_003047440.1| DNA polymerase III subunit beta [Methylotenera mobilis JLW8]
 gi|253982055|gb|ACT46913.1| DNA polymerase III, beta subunit [Methylotenera mobilis JLW8]
          Length = 366

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 109/386 (28%), Positives = 205/386 (53%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M I + R  +L+ L     I+E+++T+P+  ++LL+A    + + A+  E++I+ ++ ++
Sbjct: 1   MNIQINRETLLKPLTSVTSIVEKRHTLPILSNLLLEAKQNKIHLTATDLEMQISLSVDSA 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP- 119
                S T+SA  L DI R L D + I+    +     + +  G S F LQ+ P +++P 
Sbjct: 61  TSNDFSTTISAKKLLDICRSLPDNSDINMATNDS---RITVKAGKSRFNLQTLPAADYPV 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
            TK +       +    LK L+++  FAMA ++IRYYLNG+   +     +L  V TDGH
Sbjct: 118 MTKTQSQGTVITIPQRQLKELLKQVEFAMAQQDIRYYLNGLLVEVVAN--RLNIVGTDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RL+    ++     +   +I+PRK V E++++L   +  V V ++ ++++ +  ++ +  
Sbjct: 176 RLSFTSTELKENY-EKQDVILPRKTVIELIKLLDDSEEDVNVEIANNQVNFSFGNIRLIS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           ++IDG+FP+Y  VIP  +          +  A+ R SI+S+ + + +++ LS++ L +  
Sbjct: 235 KVIDGKFPDYNRVIPTGHQNTFTTERLGVLLAMQRASILSNEKYRGIRMVLSNNNLKLIS 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
            N D  +A E + + Y    +DI FN  YL+++++N +S     ++V F    +NSS  I
Sbjct: 295 TNSDQEEAEEELEIAYGSDALDIGFNVTYLIDVLNNTNS-----EQVTFSFADANSSCLI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
              +           +  YV+MPMRI
Sbjct: 350 TLPNN---------PDYKYVVMPMRI 366


>gi|225163912|ref|ZP_03726204.1| DNA-directed DNA polymerase [Opitutaceae bacterium TAV2]
 gi|224801489|gb|EEG19793.1| DNA-directed DNA polymerase [Opitutaceae bacterium TAV2]
          Length = 374

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 100/394 (25%), Positives = 182/394 (46%), Gaps = 30/394 (7%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           MK  + R      L     ++  K T+P+  +VL++A    + +  +  ++ I   I A 
Sbjct: 1   MKFKINRDHFSNGLAQVLNVVGSKATMPILSNVLIEAEKDYISLTTTNLDLGIRCKIKAE 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           V   GS+T+    L  IVR+L     +    +     +V ++ G S F +    + EFP 
Sbjct: 61  VKEPGSVTLPVKRLATIVRELPS---VDVAFDGAANHQVKLTSGGSTFKIMGIGKDEFPP 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHR 180
             E     SF L+   L  +++   +A +T+E RY LNG++F+  +   KL  VATDG R
Sbjct: 118 LPEFGDDRSFNLSQEELTTMLKSVSYAQSTDETRYILNGVYFNFRD--AKLTLVATDGRR 175

Query: 181 LAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLN--------- 231
           LA+   ++        +II+P K VGE+LR+L                            
Sbjct: 176 LALTSKEMEIPEESAGAIILPAKTVGELLRMLGKGAKIKIAFNDRRASFEISTEGEDTGL 235

Query: 232 IESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLS 291
           ++S+ +  ++++G +PNYQ VIP    + +++      + V R +++ S +   V++ LS
Sbjct: 236 VDSIYLYSKVVEGNYPNYQQVIPKETHQRIKLERELFAECVHRAALVCSDKSNQVRIKLS 295

Query: 292 SDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLD 351
           ++ L +T  +PD G+A ESM + Y+   + + FN  ++++ +  +       DEV F L 
Sbjct: 296 TNLLEITAQSPDFGEAHESMAIAYSGPDLQVAFNPAFVMDPLKAL-----TKDEVFFELK 350

Query: 352 SSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
              S    +  +           +   V+MP+R+
Sbjct: 351 DEVSPGVFKTLE-----------SFICVIMPVRL 373


>gi|222053119|ref|YP_002535481.1| DNA polymerase III, beta subunit [Geobacter sp. FRC-32]
 gi|221562408|gb|ACM18380.1| DNA polymerase III, beta subunit [Geobacter sp. FRC-32]
          Length = 372

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 209/389 (53%), Gaps = 21/389 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           M+ ++ +    + L     I+E++NT+P+  + L++A++GLL I A+  E+ +  + P +
Sbjct: 1   MEFSISKETFTKALQKIQGIVEKRNTMPILSNALIEASNGLLHITATDLEVGMKSSYPVT 60

Query: 61  VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
           +   G ITV+A  +Y+I+++L D       KEN+    + I  G ++F +      EFP 
Sbjct: 61  IAKEGKITVAAKKIYEIIKELSDEEITFSTKENDW---IEIHCGKAHFNIVGLSPDEFPY 117

Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFH--INEEDLKLCAVATDG 178
             +        L+++ L  ++E+T +A+ T+E ++ LNGIF      E    +  VATDG
Sbjct: 118 FPKVNDNIFVNLSNNFLSEMIEKTSYAICTDESKFNLNGIFIKAASEEGRNVIRMVATDG 177

Query: 179 HRLAVAEVDIVAQIAKMPS--IIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLS 236
           HRL+V   +    I+   S  +I P+K + E+ +I   +   + +   ++   +  ++  
Sbjct: 178 HRLSVTNKEFEGAISNELSKGVIFPKKGIYELKKIAEEESGDIMMGFMDNSAVIKKDNTV 237

Query: 237 MSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLC 296
           + +RLIDGEFP+Y  VIP +NDK++ V+   L  ++ R++I+SS + + +KL + S  + 
Sbjct: 238 IVMRLIDGEFPDYTKVIPANNDKKVTVSREALLHSLRRMAILSSEKFKGIKLDVRSGSIE 297

Query: 297 MTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356
           ++  NP++G A E   V Y+  P+ + FN +YL++++  +      DD+V   L    S 
Sbjct: 298 ISSSNPELGDAREEQEVLYDGTPLSVRFNARYLIDVLTVL-----RDDQVELDLRDELSP 352

Query: 357 VFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           + ++   KD         +   V+MPMR+
Sbjct: 353 IIMKPIAKD---------DFMSVIMPMRL 372


>gi|295675103|ref|YP_003603627.1| DNA polymerase III, beta subunit [Burkholderia sp. CCGE1002]
 gi|295434946|gb|ADG14116.1| DNA polymerase III, beta subunit [Burkholderia sp. CCGE1002]
          Length = 367

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER ++L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDSVATTVAARKLLDILRAMPDGQVTLTLNDK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + ++Y  S  +     + L+   HF+MA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDYGASLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I    A    +I+PRK + E+ R+L   D ++ + ++++++      + +
Sbjct: 175 GHRLAFSSMKIEGSFA-RQEVIIPRKTILELQRLLEDIDDTLNIDIAQTQVKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP S+  + ++    L++++ R +I++S + + V+  +   +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKSHKNKFQIGREELQRSLQRAAILTSDKFKGVRCIVEPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y+   +DI FN  YLL+++ N+       D +   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYDGDSVDIGFNVTYLLDVLANLK-----VDMLQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITIPENDE---------FKYVVMPMRI 367


>gi|170694068|ref|ZP_02885224.1| DNA polymerase III, beta subunit [Burkholderia graminis C4D1M]
 gi|170141140|gb|EDT09312.1| DNA polymerase III, beta subunit [Burkholderia graminis C4D1M]
          Length = 367

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER ++L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGDTVATTVAARKLLDILRAMPDGQVTLTLNDK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + ++Y  +  +     + L+   HF+MA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDYGANLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I    A    +I+PRK + E+ R+L   D ++K+ ++++++      + +
Sbjct: 175 GHRLAFSSMKIEGSFA-RQEVIIPRKTILELQRLLEDIDDTLKIDIAQTQVKFTFGQVEL 233

Query: 238 SVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCM 297
             +L++G+FP++Q VIP S+  +  +    L++++ R +I++S + + V+  +   +L +
Sbjct: 234 VSKLVEGKFPDFQRVIPKSHKNQFVIGREELQRSLQRAAILTSDKFKGVRCIIEPGQLKI 293

Query: 298 TVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV 357
              N D  +A E + + Y+   +DI FN  YLL+++ N+       D +   L  ++SS 
Sbjct: 294 MSTNADQEEAQEELEIAYDGDSVDIGFNVTYLLDVLANLK-----VDTLQVSLGDASSSA 348

Query: 358 FIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
            I   + D            YV+MPMRI
Sbjct: 349 LITIPENDE---------FKYVVMPMRI 367


>gi|186474775|ref|YP_001856245.1| DNA polymerase III subunit beta [Burkholderia phymatum STM815]
 gi|184191234|gb|ACC69199.1| DNA polymerase III, beta subunit [Burkholderia phymatum STM815]
          Length = 367

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 200/388 (51%), Gaps = 24/388 (6%)

Query: 1   MKI-TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA 59
           M++   ER ++L  L     I+ER++T+P+  ++L+  N   +   ++  E++IT     
Sbjct: 1   MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF 60

Query: 60  SVDVCG-SITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEF 118
            V     + TV+A  L DI+R + DG       +      + +  G S F LQ+    EF
Sbjct: 61  GVGGESVATTVAARKLLDILRAMPDGQVTLTLNDK----RLTVQSGKSRFALQTLAADEF 116

Query: 119 PSTKE-EEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATD 177
           P+  + +++  +  +     + L+   HFAMA ++IRYYLNG+   ++ +  +L AVATD
Sbjct: 117 PTVAQAKDFGANLAVPQKTFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGD--QLMAVATD 174

Query: 178 GHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSM 237
           GHRLA + + I    A    +I+PRK + E+ R+L   D  +K+ ++ +++      + +
Sbjct: 175