RPSBLAST alignment of GI: 254780454 and MMDB domain: 3fds_D_
>3fds_D (D:) DNA polymerase sliding clamp C; protein-protein complex, cytoplasm, DNA damage, DNA repair, DNA replication, DNA-binding; HET: DNA 1PE PGE; 2.05A {Sulfolobus solfataricus} PDB: 2nti_E* 2io4_B* 2ix2_B* 2hik_B 2hii_B* 2izo_B*Length = 245
Score = 138 bits (348), Expect = 1e-33
Identities = 22/256 (8%), Positives = 75/256 (29%), Gaps = 23/256 (8%)
Query: 137 LKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQI---- 192
+++ F+ + +L+ F + +E +++ D R+ ++ + +
Sbjct: 3 KAKVIDAVSFSYILRTVGDFLSEANFIVTKEGIRV--SGIDPSRVVFLDIFLPSSYFEGF 60
Query: 193 ---AKMPSIIVPRKAVGEILRILSSKDS-SVKVSLSESRIHLNIESLSMSVRLIDGEFPN 248
+ I + V +IL+ + D+ + + S+ + + E +
Sbjct: 61 EVSQEKEIIGFKLEDVNDILKRVLKDDTLILSSNESKLTLTFDGEFTRSFELPLIQVEST 120
Query: 249 YQNVIPCSNDKELRVNCTNLRQAVDRVSI-MSSVRIQAVKLSLSSDKLCMTVDNPDMGKA 307
+ + ++ +D +S + I + + L + +
Sbjct: 121 QPPSVNLEFPFKAQLLTITFADIIDELSDLGEVLNIHSKENKLYFEVIGDLSTAKVELST 180
Query: 308 IESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSK 367
+ + + + +Y+ + + + S + +R K
Sbjct: 181 DNGTLLEASGADVSSSYGMEYVANTTKMRRA-----SDSMELYFGSQIPLKLRFKLPQEG 235
Query: 368 NNKDNKVNAFYVLMPM 383
+ + P
Sbjct: 236 YGD-------FYIAPR 244