RPSBLAST alignment of GI: 254780454 and SCOP domain: d1ok7a2

Alignment

>d1ok7a2 d.131.1.1 (A:123-244) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]} Length = 122

 Score = 89.4 bits (221), Expect = 5e-19
 Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 3/121 (2%)

Query: 129 SFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDI 188
            F L  + +K L+E T F+MA +++RYYLNG+ F    E+L+    ATDGHRLAV  + I
Sbjct: 5   EFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTV--ATDGHRLAVCSMPI 62

Query: 189 VAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDGEFPN 248
              +    S+IVPRK V E++R+L   D+ ++V +  + I  ++     + +L+DG FP+
Sbjct: 63  GQSLPSH-SVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPD 121

Query: 249 Y 249
           Y
Sbjct: 122 Y 122

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA clamp
superfamily: DNA clamp
family: DNA polymerase III, beta subunit
domain: DNA polymerase III, beta subunit
species: Escherichia coli [TaxId: 562]