RPSBLAST alignment of GI: 254780454 and SCOP domain: d1ok7a3

Alignment

 Score = 95.8 bits (238), Expect = 6e-21
 Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 14/136 (10%)

Query: 250 QNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIE 309
           + V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T +NP+  +A E
Sbjct: 1   RRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEE 60

Query: 310 SMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNN 369
            ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I          
Sbjct: 61  ILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQIEDAASQ---- 111

Query: 370 KDNKVNAFYVLMPMRI 385
                +A YV+MPMR+
Sbjct: 112 -----SAAYVVMPMRL 122

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA clamp
superfamily: DNA clamp
family: DNA polymerase III, beta subunit
domain: DNA polymerase III, beta subunit
species: Escherichia coli [TaxId: 562]