HHsearch alignment for GI: 254780455 and conserved domain: COG1488

>COG1488 PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism].
Probab=100.00  E-value=0  Score=657.47  Aligned_cols=356  Identities=33%  Similarity=0.463  Sum_probs=309.3

Q ss_pred             CCCCCCHHHHCCHHHHHHHHHHHHHHCCC-CEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
Q ss_conf             56710012440117899999999984899-65999999658875544000023699999999716999899999983777
Q gi|254780455|r    7 TSDPIISSLLDTDFYKILMLQLIWKFYPD-IKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSF   85 (418)
Q Consensus         7 ~~~piI~SlLdTD~YkltM~~a~~~~~~~-~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~   85 (418)
T Consensus         6 ~~~~~i~~~L~TD~Ykltm~q~~~~~~~~~~~v~~e~~~R~~p-~~~~~~~~~gl~~~l~~l~~l~fs~ee~~~L~~~--   82 (405)
T COG1488           6 KSEPDIKSLLDTDLYKLTMLQAYLHDGPNNVTVVFEFFFRKLP-FLGGYAVFAGLEEVLELLENLRFSEEEIAYLRSL--   82 (405)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC--
T ss_conf             0067776437768999999999885489871799999852786-5306899988999999975157888999987506--


Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCEEEECCC------CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             555557898899997508998416873399------26999854877867788899999988888775313486679999
Q gi|254780455|r   86 YGKKQLFEPKFLSWLSDFQLPEYDLSHKKG------QYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLL  159 (418)
Q Consensus        86 ~~~~~~~~~~fl~~L~~~~f~~~~~~~~eg------~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~  159 (418)
T Consensus        83 ----~~~~~~fl~~L~--~f~~~i~a~~eg~~~~~~ep~l~i~G~~~e~~l~Et~lL~ii~~~~~---------------  141 (405)
T COG1488          83 ----PFFKPDFLNYLR--RFPLDIYAVPEGTVVFPNEPVLRIEGPYLETILLETPLLGIINEASL---------------  141 (405)
T ss_pred             ----CCCCHHHHHHHH--HCCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH---------------
T ss_conf             ----655268999985--18786278742512048982599985588999999999999999999---------------


Q ss_pred             HHHHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf             999999999877767426--997599842443479788999999998421212012478899997289876752048987
Q gi|254780455|r  160 YAQAKKKLWSKIIKLKNF--SGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPM  237 (418)
Q Consensus       160 ~~~~~~~~~~k~~~~~~~--~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~  237 (418)
T Consensus       142 -------iatka~r~~~~a~~~~~v~dFGtRr~~~~~~~---~~~~raa~igg~~GtSnv~~a~~~g~~~~GTmaHa~i~  211 (405)
T COG1488         142 -------IATKAARVKDAAGKGFPVLDFGTRRRHSADAQ---PWIGRAAYIGGFDGTSNVLAAKKYGIKPIGTMAHALIQ  211 (405)
T ss_pred             -------HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHH
T ss_conf             -------99999999975358984885467656640567---99999998734646106999997299976864539999


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHHHH----CCCCEEECCCCCHHHHHHHHHHH
Q ss_conf             640012203678654999999999963988-6598634689899999899731----00243412888878999999999
Q gi|254780455|r  238 VAAAITRTDIETQNAPYQMMQQWNRLYDDN-LLIVLPDSFGTDFFLEHAPSWM----TQWKGFRHDSASPIEGGEKIIAW  312 (418)
Q Consensus       238 a~~~~~~~~~~~~~~~~~a~~~~~~~yp~~-~~i~L~DTy~~~~~l~~~~~~~----~~~~GVR~DSGD~~~~~~k~~~~  312 (418)
T Consensus       212 ~~~~~~~-------~e~~A~~~~~e~~~~~~~~i~ltD~~~~~~~~~~~~~~~~~~~~~~~GVR~DSGd~~~~~~kvr~~  284 (405)
T COG1488         212 AFGQLFG-------DEVAAFRAWAETYPGDKLLIALTDTYLDDAFLNAIKVAKALGDKRLDGVRLDSGDPRELSEKVRAH  284 (405)
T ss_pred             HHHCCCC-------HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf             8620233-------099999999997689972899985065277887678888614466338977999979999999999


Q ss_pred             HHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE
Q ss_conf             99779881130899738989999999999724897378633464314656666665567773216898575768111673
Q gi|254780455|r  313 WKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKL  392 (418)
Q Consensus       313 l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~Kl  392 (418)
T Consensus       285 ld~~G~~~--~~Ii~Sdg~lde~~i~~l~~~g~~-~d~FGvGT~L~~~~---------~~~~~~~v~Klvev~g~p~~Ki  352 (405)
T COG1488         285 LDKLGYDP--VKIIVSDGLLDEKIIALLRAFGAR-NDAFGVGTNLTTAK---------PRPPLDIVYKLVEVNGKPVAKI  352 (405)
T ss_pred             HHHCCCCC--EEEEEECCCCHHHHHHHHHHHCCC-CCEECCCHHHCCCC---------CCCCCEEEEEEEEECCCCCEEE
T ss_conf             99759985--089983785358999999981787-20765655431489---------9886306999999868011352


Q ss_pred             ECCCCCCCCCHHH-HHHHHHHCCC
Q ss_conf             2688752488899-9999998096
Q gi|254780455|r  393 SDDPAKTTGDISE-IKRYLKIFKI  415 (418)
Q Consensus       393 Sd~~~K~tg~~~~-~~~~~~~~~~  415 (418)
T Consensus       353 s~~Pgkk~~~r~~~~~~~~~~~~~  376 (405)
T COG1488         353 SKNPGKKQVYRSAFVRELLVVFGD  376 (405)
T ss_pred             CCCCCCCEEECCHHHHHHHEECCC
T ss_conf             578764403440344544210254