HHsearch results for GI: 254780455 and protein with PDBid: 1ybe_A
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=100.00 E-value=0 Score=950.89 Aligned_cols=414 Identities=59% Similarity=1.100 Sum_probs=403.4
Q ss_pred CCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHC
Q ss_conf 25656710012440117899999999984899659999996588755440000236999999997169998999999837
Q gi|254780455|r 4 YFSTSDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVEN 83 (418)
Q Consensus 4 ~~~~~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~ 83 (418)
+-+.-+|||+||||||+|||||+||||+++|+++|+|+||||++++++++|++++||+++|++|++||||+|||+||+++
T Consensus 20 ~~~~~~pii~SLLdTDlYklTM~qa~~~~~~~~~a~f~~f~R~~~~~~~~~~v~~gL~~~i~~l~~l~ft~eei~yL~~~ 99 (449)
T 1ybe_A 20 HTWKLDPIVRSLIDTDFYKLLMLQMIWKLYPEVDATFSLINRTKTVRLAEEIDEMELREQLDHARTLRLSKKENIWLAGN 99 (449)
T ss_dssp --CCCCCSCCCTTCSBHHHHHHHHHHHHHCTTCBEEEEEEESCCSSCSTTTSCHHHHHHHHHHHTTCCCCHHHHHHHHHS
T ss_pred CCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
T ss_conf 44688402114503278999999999986899759999997889877516889989999999997089799999999846
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 77555557898899997508998416873399269998548778677888999999888887753134866799999999
Q gi|254780455|r 84 SFYGKKQLFEPKFLSWLSDFQLPEYDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLLYAQA 163 (418)
Q Consensus 84 ~~~~~~~~~~~~fl~~L~~~~f~~~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~ 163 (418)
+++.+.+.|+++|++||++++|++.+++++||+++|+|+|||.+|||||||||+||||+|++++.+.+.....+..++.+
T Consensus 100 ~~~~~~~~f~~~fl~~L~~~~f~~~~~~~~eg~l~l~ieGp~~~~~L~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~ 179 (449)
T 1ybe_A 100 TFYGRSQIFEPEFLSWLSSYQLPEYELFKRDGQYELNFHGRWMDTTLWEIPALSIINELRSRSAMRSLGYFTLDVLYARA 179 (449)
T ss_dssp CSSSCSCCSCHHHHHHHHTCCCCCCEEEECSSCEEEEECSBHHHHGGGHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87545566898999998617899847996088189999655435428878999999999999887410022578999999
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 99999877767426997599842443479788999999998421212012478899997289876752048987640012
Q gi|254780455|r 164 KKKLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAIT 243 (418)
Q Consensus 164 ~~~~~~k~~~~~~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~ 243 (418)
..++.++++++++++|++++|||+|||||+++|++++.++|+++++||+|||||+||++|||||+|||||||||+|+++.
T Consensus 180 ~~~~~~~a~~l~~~~g~~l~EFGtRRa~s~q~~d~~l~a~r~a~~ggf~GTSNV~aa~~~gip~~GTmAHs~v~~~~~~~ 259 (449)
T 1ybe_A 180 KAKMWEKVERLRELPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSDLEAVGTNAHELPMVVAALA 259 (449)
T ss_dssp HHHHHHHHHHHTTCTTCCEEECCTTTCSCHHHHHHHHHHHHHHHGGGEEEESBHHHHHHHTCCBCCCCCTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHH
T ss_conf 99999999998745898230213322346378999999999982488821066999987699961441769999875131
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 20367865499999999996398865986346898999998997310024341288887899999999999779881130
Q gi|254780455|r 244 RTDIETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNK 323 (418)
Q Consensus 244 ~~~~~~~~~~~~a~~~~~~~yp~~~~i~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k 323 (418)
+.+.++++++..||++|+++||++++|+|+|||++++|++++.++..++.|||+|||||++|++|+|++||++|++|.+|
T Consensus 260 ~~~~~~~~~~~~a~~~w~~~y~~~l~i~L~DT~g~~~fl~~~~~~~~~~~GVRlDSGDl~~~s~k~r~~~d~~G~~p~~K 339 (449)
T 1ybe_A 260 QTNEELAAAPYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEWWRKMGRDPRTK 339 (449)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCCGGGCEECCCTTCHHHHHHTCCGGGGGSSEECCCSSCHHHHHHHHHHHHHHTTCCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 10689998899999999986699635753064458999987787448788890799898999999999999869997875
Q ss_pred EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCH
Q ss_conf 89973898999999999972489737863346431465666666556777321689857576811167326887524888
Q gi|254780455|r 324 FLVFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSDDPAKTTGDI 403 (418)
Q Consensus 324 ~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~g~P~~KlSd~~~K~tg~~ 403 (418)
.|||||||||++|.+|+++++++++++|||||+|||||+|..+.++.++|+|||||||||+||+|||||||+|||+|||+
T Consensus 340 ~iv~Sd~LD~~~i~~l~~~~~g~~~d~FGIGT~Lt~d~~g~~~~~~~~~p~l~~VyKLve~~G~P~~KlSd~~gK~tg~~ 419 (449)
T 1ybe_A 340 MLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKATGDP 419 (449)
T ss_dssp EEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHCCCTTCCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCBSCH
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCH
T ss_conf 79992899999999999985698532896486306588666755446798653699988468932467248988766998
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 99999999809666
Q gi|254780455|r 404 SEIKRYLKIFKIKK 417 (418)
Q Consensus 404 ~~~~~~~~~~~~~~ 417 (418)
+.|++|+|+|++.+
T Consensus 420 ~~~~~~~r~~g~~~ 433 (449)
T 1ybe_A 420 AEVERYLKFFGEED 433 (449)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999999837676