HHsearch results for GI: 254780455 and protein with PDBid: 2b7n_A
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=99.25 E-value=6.4e-10 Score=86.05 Aligned_cols=265 Identities=14% Similarity=0.061 Sum_probs=165.5
Q ss_pred CCCHHHHCCHHHHH--HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf 10012440117899--9999999848996599999965887554400002369999999971699989999998377755
Q gi|254780455|r 10 PIISSLLDTDFYKI--LMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYG 87 (418)
Q Consensus 10 piI~SlLdTD~Ykl--tM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~ 87 (418)
.+|+..|.-|.... |- +. ...+.+++..++.|.+ .+++|+++..+.++.+-. ++.
T Consensus 5 ~~i~~~l~ED~~~gD~Tt-~~---~~~~~~~~a~i~~r~~-------gv~~G~~~~~~~~~~~~~---~v~--------- 61 (273)
T 2b7n_A 5 TFLERALKEDLGHGDLFE-RV---LEKDFKATAFVRAKQE-------GVFSGEKYALELLEMTGI---ECV--------- 61 (273)
T ss_dssp HHHHHHHHHHHTTCCSHH-HH---CSCCCEEEEEEEESSC-------EECCCHHHHHHHHHHTTC---EEE---------
T ss_pred HHHHHHHHCCCCCCCCCC-CC---CCCCCEEEEEEEECCC-------EEEECHHHHHHHHHHHCC---CCE---------
T ss_conf 999999960799986512-23---6999879999996899-------999739999999986155---308---------
Q ss_pred CCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 55578988999975089984168733992699985487786778889999998888877531348667999999999999
Q gi|254780455|r 88 KKQLFEPKFLSWLSDFQLPEYDLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLLYAQAKKKL 167 (418)
Q Consensus 88 ~~~~~~~~fl~~L~~~~f~~~~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (418)
.+-++.-.+.+|+++++|+||..+....|+.+||+|+.+...+|. ..+.
T Consensus 62 ----------------~~~~dG~~v~~g~~Il~i~G~~~~il~~Er~~Ln~L~~~SGIAT~---------------t~~~ 110 (273)
T 2b7n_A 62 ----------------QTIKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATL---------------TSRF 110 (273)
T ss_dssp ----------------EECCTTCEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_pred ----------------EEECCCCEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_conf ----------------973376375089899999860999999999999999999999999---------------9999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHH
Q ss_conf 98777674269975998424434797889999999984212120124788999972898767520489876400122036
Q gi|254780455|r 168 WSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTDI 247 (418)
Q Consensus 168 ~~k~~~~~~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~~ 247 (418)
..+ +.+.++.-|+||+.++-. -.-..+|...||..+.+ +|+.......+..+-+++...
T Consensus 111 v~~------a~~~~i~i~~TRKt~Pg~----r~l~k~Av~~GGg~~hR-------~~l~d~ilikdnHi~~~g~~~---- 169 (273)
T 2b7n_A 111 VEA------LNSHKVRLLDTRKTRPLL----RIFEKYSVLNGGASNHR-------LGLDDALMLKDTHLRHVKDLK---- 169 (273)
T ss_dssp HHH------HCCSSSEEECCSCCCTTC----HHHHHHHHHTTTCCCCC-------SSTTTCEEECHHHHTTCSSHH----
T ss_pred HHH------HCCCCEEEEECCCCCCCH----HHHHHHHHHHCCCCCCC-------CCCCCCCCCCHHHHHHCCCHH----
T ss_conf 887------259965997268687356----89999999966875645-------676543410522677626999----
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 78654999999999963988-65986346898999998997310024341288887899999999999779881130899
Q gi|254780455|r 248 ETQNAPYQMMQQWNRLYDDN-LLIVLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLV 326 (418)
Q Consensus 248 ~~~~~~~~a~~~~~~~yp~~-~~i~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~iv 326 (418)
.+.....+..|.. .-..-+||+ +.+... ...+.+.|++|..+|.. .+++++..+... | ...|.
T Consensus 170 -------~~~~~~~~~~~~~~~I~vEv~~~--~ea~~a---~~~g~d~i~LDn~~~~~-~~~~v~~~~~~~--~-~v~ie 233 (273)
T 2b7n_A 170 -------SFLTHARKNLPFTAKIEIECESF--EEAKNA---MNAGADIVMCDNLSVLE-TKEIAAYRDAHY--P-FVLLE 233 (273)
T ss_dssp -------HHHHHHGGGSCTTCCEEEEESSH--HHHHHH---HHHTCSEEEEETCCHHH-HHHHHHHHHHHC--T-TCEEE
T ss_pred -------HHHHHHHHHCCCCCEEEEEECCH--HHHHHH---HHCCCCEEECCCCCHHH-HHHHHHHHHCCC--C-CEEEE
T ss_conf -------99999887479871599997689--999999---87488588318989999-999999973769--9-66999
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 7389899999999997248973786334643146566666655677732168985
Q gi|254780455|r 327 FSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKV 381 (418)
Q Consensus 327 ~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKl 381 (418)
+|+|+|++.+.+.- ...+|.+++|. ||. +.|++++-.++
T Consensus 234 aSGGI~~~~i~~ya----~~GVD~isvg~-lt~-----------~a~~~Disl~i 272 (273)
T 2b7n_A 234 ASGNISLESINAYA----KSGVDAISVGA-LIH-----------QATFIDMHMKM 272 (273)
T ss_dssp EESSCCTTTHHHHH----TTTCSEEECTH-HHH-----------TCCCCCEEEEC
T ss_pred EECCCCHHHHHHHH----HCCCCEEECCH-HHC-----------CCCCCCEEEEC
T ss_conf 97999999999999----76999998586-545-----------99662337855