HHsearch results for GI: 254780455 and protein with PDBid: 2im5_A
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=100.00 E-value=0 Score=857.87 Aligned_cols=382 Identities=31% Similarity=0.410 Sum_probs=347.9
Q ss_pred CCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 10012440117899999999984899659999996588755440000236999999997169998999999837775555
Q gi|254780455|r 10 PIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYGKK 89 (418)
Q Consensus 10 piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~~~ 89 (418)
+||+||||||+|||||+|+||+++|+++|+|+||+|+++ .+++.+++||+++|++|++||||+|||+||++.+
T Consensus 2 ~iI~SlLdTD~YklTM~~a~~~~~~~~~a~f~~~~R~p~--~~~~~~~~gl~~~l~~l~~lrft~eei~yL~~~~----- 74 (394)
T 2im5_A 2 GIIRSILDTDLYKFTTGYAYAKLFPRAYGEFRFIDRNRQ--GFTEEFAELVRGEIRAMAALSLTRDEKEFLQREL----- 74 (394)
T ss_dssp -CCCCTTCSBHHHHHHHHHHHHHCTTCEEEEEEEETTCC--CCCHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHC-----
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC-----
T ss_conf 710124033789999999999868995799999952886--5305899999999999986699999999998607-----
Q ss_pred CCCCHHHHHHHHHCCCCCC---EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 5789889999750899841---6873399269998548778677888999999888887753134866799999999999
Q gi|254780455|r 90 QLFEPKFLSWLSDFQLPEY---DLSHKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLLYAQAKKK 166 (418)
Q Consensus 90 ~~~~~~fl~~L~~~~f~~~---~~~~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (418)
++|+++|++||++|||+++ ++..+||+++|+|+|||.+|||||||||+||||++++++.+.+........
T Consensus 75 ~~~~~~fl~yL~~frf~~~e~~i~~~~eg~l~i~v~Gp~~~~~l~Et~lL~iin~~~~~~~~~~~~~~~~~~~------- 147 (394)
T 2im5_A 75 PYLPPIYIDFLDGFRFDPEEVTVSIDAQGHLDIRAQGLLYRVTLWETPILAVISELYYRFIGAEPDWKQVEEV------- 147 (394)
T ss_dssp TTSCHHHHHHHHHCCCCGGGEEEEECTTSCEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHTTCCCCHHHHHHH-------
T ss_pred CCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_conf 8789899999985787744589996689879999973247889999999999999999876424779999999-------
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH
Q ss_conf 99877767426997599842443479788999999998421212012478899997289876752048987640012203
Q gi|254780455|r 167 LWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTD 246 (418)
Q Consensus 167 ~~~k~~~~~~~~~~~l~eFG~RR~~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~ 246 (418)
..+|..++ .+++++++|||+|||||+.+|++++.++++++++||+|||||+||++|||||+|||||||||+|+++.
T Consensus 148 ~~~k~~~~-~~~~~~~~eFG~RRa~~~~~~~~~~~~~~a~~~~G~~gTSNv~aa~~~gip~~GTmAHs~i~~~~~~~--- 223 (394)
T 2im5_A 148 TRSKGELM-REHRATFSIFGMRRRFSLEVEDRVTDILKQYAGESLFGTSNVHLAHKHGLRVSGTHPHEWIQFHGAIY--- 223 (394)
T ss_dssp HHHHHHHH-HHTTCCEEECCSTTCSCHHHHHHHHHHHHHHSGGGEEEESBHHHHHHHTCEECCCCCHHHHHHHHHHH---
T ss_pred HHHHHHHH-HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH---
T ss_conf 99999997-35899778776766664326699999999983388653346889986699984101339999754465---
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH-HHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 6786549999999999639886598634689899999899-731002434128888789999999999977988113089
Q gi|254780455|r 247 IETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFLEHAP-SWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFL 325 (418)
Q Consensus 247 ~~~~~~~~~a~~~~~~~yp~~~~i~L~DTy~~~~~l~~~~-~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~i 325 (418)
+++++|..||++|+++||++++|+|+|||++++|++++. ..+..++|||||||||++|++++|++||++|++|.+|+|
T Consensus 224 -~~~~a~~~Af~~~~~~yp~~~~i~L~DTy~~~~~l~~~~~~~~~~~~GvRlDSGDl~~ls~~~r~~~d~~G~~~~~k~I 302 (394)
T 2im5_A 224 -GYKMANYVAMEDWINVYDGDLGTVLTDTYTTDVFMRNFSKKHAMLFTSLRHDSGDPEIFIEKAVRRYEELRVDPKIKYI 302 (394)
T ss_dssp -CTTTHHHHHHHHHHHHHTTSSCEEECCTTCHHHHHHHCCHHHHHHCCEEEECSSCHHHHHHHHHHHHHHTTCCGGGCEE
T ss_pred -HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf -6788899999999997599874543010013999998898732044764548998799999999999977979884399
Q ss_pred EECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC------CCCEEEEECCCCCC
Q ss_conf 973898999999999972489737863346431465666666556777321689857576------81116732688752
Q gi|254780455|r 326 VFSDNLDVDSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKAN------DKHAVKLSDDPAKT 399 (418)
Q Consensus 326 v~Sd~Ld~e~i~~l~~~~~~~~~~~fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve~~------g~P~~KlSd~~~K~ 399 (418)
||||||||++|.+|+++++++++++|||||+|||| |+.++|+||+|||||+|+ |+||||+||+|+|+
T Consensus 303 v~S~~Lde~~i~~l~~~~~~~~~~~fGVGT~L~~d-------t~~~~p~L~~VyKLv~~~~~~~~~~~P~~KlSd~~~K~ 375 (394)
T 2im5_A 303 IFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTND-------VGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKH 375 (394)
T ss_dssp EECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSC-------CSTTCCCCCEEEEEEEEESSTTSCCEECCBCCSSTTCC
T ss_pred EECCCCCHHHHHHHHHHHCCCCCCEEECCCCEECC-------CCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCC
T ss_conf 98399999999999998668987278867131646-------88899977579988775355566895127945898776
Q ss_pred CCCHHHHHHHHHHCCCCC
Q ss_conf 488899999999809666
Q gi|254780455|r 400 TGDISEIKRYLKIFKIKK 417 (418)
Q Consensus 400 tg~~~~~~~~~~~~~~~~ 417 (418)
|||++.+++|++.|++++
T Consensus 376 tg~~~~~~~~~~~~g~~~ 393 (394)
T 2im5_A 376 TGEPEEILLAMNTLGIKP 393 (394)
T ss_dssp BSCHHHHHHHHHHHTC--
T ss_pred CCCHHHHHHHHHHHCCCC
T ss_conf 799999999999839767