HHsearch results for GI: 254780455 and protein with PDBid: 3gnn_A
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.56 E-value=5.2e-06 Score=59.21 Aligned_cols=243 Identities=8% Similarity=-0.043 Sum_probs=140.0
Q ss_pred CCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC---CCCCEE
Q ss_conf 99659999996588755440000236999999997169998999999837775555578988999975089---984168
Q gi|254780455|r 34 PDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYGKKQLFEPKFLSWLSDFQ---LPEYDL 110 (418)
Q Consensus 34 ~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~~~~~~~~~fl~~L~~~~---f~~~~~ 110 (418)
++..+...++.|.. .+++|+...-.-++.+ . .+.+ +-.+.-
T Consensus 53 ~~~~~~a~i~ake~-------gVl~G~~~~~~v~~~~----------~-------------------~~~~v~~~~~dG~ 96 (298)
T 3gnn_A 53 DGAPRRARVIVRED-------AVLCGVPWFDAVVRAV----------D-------------------PSIEVDWRHREGD 96 (298)
T ss_dssp CCSEEEEEEEECSC-------EECCCHHHHHHHHHHH----------C-------------------TTCEEEESSCTTC
T ss_pred CCCEEEEEEEECCC-------EEEECHHHHHHHHHHH----------C-------------------CCCEEEEECCCCC
T ss_conf 99769999997899-------8998689999999983----------9-------------------7626876648898
Q ss_pred EECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 73399269998548778677888999999888887753134866799999999999998777674269975998424434
Q gi|254780455|r 111 SHKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLLYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRR 190 (418)
Q Consensus 111 ~~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~l~eFG~RR~ 190 (418)
.+.+|+++++++||.......|..+||++..+...+|.+ .+...+ +.+.++.=++||..
T Consensus 97 ~v~~g~~i~~i~G~~~~il~~ER~~LN~L~~~SGIAT~T---------------~~~v~~------~~~~~~~i~~TRKt 155 (298)
T 3gnn_A 97 RMSADSTVCELRGPARALLTAERNALNFLQLLSGVASAT---------------RQYVDR------IADTRARILDTRKT 155 (298)
T ss_dssp EECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHH------TTTSSCCEECCSCC
T ss_pred EEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHH------HCCCCCEEEECCCC
T ss_conf 963798899999679999999999999999998899999---------------999886------35987557635755
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 79788999999998421212012478899997289876752048987640012203678654999999999963988659
Q gi|254780455|r 191 HSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLI 270 (418)
Q Consensus 191 ~s~~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~~~~i 270 (418)
++-. ..-..+|...||....+ +|+...-..-+..+.+++... ++.+...+..|...-.
T Consensus 156 ~Pg~----r~l~k~Av~~GGg~~HR-------~gL~d~vlikdNHi~~~g~i~-----------~ai~~~~~~~~~~~I~ 213 (298)
T 3gnn_A 156 LPGL----RLAQKYAVRVGGGANQR-------LALYAGILIKENHIAAAGGVG-----------EALDAAFALNAEVPVQ 213 (298)
T ss_dssp CTTC----HHHHHHHHHHTTCCCC--------------------------CHH-----------HHHHHHHHHC--CCCE
T ss_pred CHHH----HHHHHHHHHHCCCCCCC-------CCCCCCCCCCCCHHHHHCCHH-----------HHHHHHHHHCCCCCEE
T ss_conf 2342----78988885652734345-------776522514555788854078-----------8877677643686167
Q ss_pred EEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEE
Q ss_conf 86346898999998997310024341288887899999999999779881130899738989999999999724897378
Q gi|254780455|r 271 VLPDSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMI 350 (418)
Q Consensus 271 ~L~DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~ 350 (418)
.-+||. +. .......+.+.|.+|...|... +++.+..+ ++ ..|-+|+|+|++.+.+.-+. .+|.
T Consensus 214 VEv~~~--~e---~~~a~~~g~d~I~LDn~s~~~~-~~~v~~~~-----~~-~~ieaSGGI~~~ni~~yA~~----GVD~ 277 (298)
T 3gnn_A 214 IEVETL--DQ---LRTALAHGARSVLLDNFTLDMM-RDAVRVTE-----GR-AVLEVSGGVNFDTVRAIAET----GVDR 277 (298)
T ss_dssp EEESSH--HH---HHHHHHTTCEEEEEESCCHHHH-HHHHHHHT-----TS-EEEEEESSCSTTTHHHHHHT----TCSE
T ss_pred EECCCH--HH---HHHHHHCCCCEEEECCCCHHHH-HHHHHHHC-----CC-EEEEEECCCCHHHHHHHHHC----CCCE
T ss_conf 851889--99---9999965987785458999999-99999858-----96-89999789999999999974----9999
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 633464314656666665567773216898575
Q gi|254780455|r 351 FGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTK 383 (418)
Q Consensus 351 fGIGT~Lt~d~~~~~~~~~~~~~~l~~VyKlve 383 (418)
+++|.-- .+.|++++-.+++|
T Consensus 278 Is~G~lt------------~sa~~~D~sl~ive 298 (298)
T 3gnn_A 278 ISIGALT------------KDVRATDYSMRIVE 298 (298)
T ss_dssp EECGGGG------------TSCCCCCEEEEEC-
T ss_pred EECCHHH------------CCCCCCCEEEEEEC
T ss_conf 9869765------------59987121589759