HHsearch results for GI: 254780455 and protein with PDBid: 3paj_A
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.39 E-value=0.00011 Score=50.08 Aligned_cols=244 Identities=11% Similarity=-0.048 Sum_probs=139.2
Q ss_pred CCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEC
Q ss_conf 99659999996588755440000236999999997169998999999837775555578988999975089984168733
Q gi|254780455|r 34 PDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYGKKQLFEPKFLSWLSDFQLPEYDLSHK 113 (418)
Q Consensus 34 ~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~~~~~~~~~fl~~L~~~~f~~~~~~~~ 113 (418)
++..++..++.|.+ .|++|++..-+-++.+ ..- +.---.-.+.-.+.
T Consensus 75 ~~~~~~a~iiare~-------gV~~G~~~~~~vf~~l-------------~~~-------------~~v~~~~~dG~~v~ 121 (320)
T 3paj_A 75 ADRISTATIITREA-------GVFCGQLWADEVFKQL-------------GGQ-------------VSIEWHVQDGDTLT 121 (320)
T ss_dssp TTCEEEEEEEESSC-------EECCCHHHHHHHHHHT-------------TSC-------------CEEEESSCTTCEEC
T ss_pred CCCEEEEEEEECCC-------EEEECHHHHHHHHHHH-------------CCC-------------CEEEEECCCCCEEE
T ss_conf 89779999997899-------9998589999999983-------------997-------------46988818999873
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
Q ss_conf 99269998548778677888999999888887753134866799999999999998777674269975998424434797
Q gi|254780455|r 114 KGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITVRSMNPFSVDLLYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSL 193 (418)
Q Consensus 114 eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~l~eFG~RR~~s~ 193 (418)
+|+++++++||.......|..+||++..+...+|.+ .+...++ .....++ ++||..++-
T Consensus 122 ~g~~i~~i~G~a~~il~~ER~~LN~Lq~lSGIAT~T---------------~~~v~~~----~~~~~~i--~dTRKT~PG 180 (320)
T 3paj_A 122 PNQTLCTLTGPARILLTGERNAMNFIQTLSGCATAT---------------ARYVQEL----KGTQCRL--LDTRKTIPG 180 (320)
T ss_dssp TTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHH----TTSSCEE--ECCSCCCTT
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHH----CCCCCEE--EECCCCCCC
T ss_conf 896899981318899999999999998886687999---------------9998762----4987169--526744772
Q ss_pred HHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 88999999998421212012478899997289876752048987640012203678654999999999963988659863
Q gi|254780455|r 194 TWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLP 273 (418)
Q Consensus 194 ~~q~~~v~~~raa~~~gf~GTSNv~aa~~~gi~~~GTmaHs~v~a~~~~~~~~~~~~~~~~~a~~~~~~~yp~~~~i~L~ 273 (418)
. -.-..+|...||... .++|+...--.-.-.+.++++.. .+.....+..|...-..-+
T Consensus 181 l----R~l~k~AV~~GGG~n-------HR~gL~d~iLIKdNHi~~~g~i~-----------~a~~~~~~~~p~~~IeVEv 238 (320)
T 3paj_A 181 L----RSALKYAVACGGGYN-------HRIGVFDAYLIKENHIIACGGIR-----------QAISTAKQLNPGKPVEVET 238 (320)
T ss_dssp C----HHHHHHHHHHTTCBC-------CCSSSSSCEEECHHHHHHHTSHH-----------HHHHHHHHHSTTSCEEEEE
T ss_pred H----HHHHHHHHHHCCCCC-------CCCCCCHHHCCCCCHHHHHCCHH-----------HHHHHHHHHCCCCEEEEEC
T ss_conf 5----799999999658656-------55663265514420676524089-----------9999999748997799932
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 46898999998997310024341288887899999999999779881130899738989999999999724897378633
Q gi|254780455|r 274 DSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGW 353 (418)
Q Consensus 274 DTy~~~~~l~~~~~~~~~~~GVR~DSGD~~~~~~k~~~~l~~~Gidp~~k~iv~Sd~Ld~e~i~~l~~~~~~~~~~~fGI 353 (418)
++. +.. ......+.+.|.+|-..|.... ++++. .+ ++ ..|-+|+|+|++.+.+.- ...+|.+.+
T Consensus 239 ~~l--~e~---~ea~~agaDiImLDn~s~e~lk-~aV~~---~~--~~-v~lEaSGGI~~~ni~~yA----~tGVD~Isv 302 (320)
T 3paj_A 239 ETL--AEL---EEAISAGADIIMLDNFSLEMMR-EAVKI---NA--GR-AALENSGNITLDNLKECA----ETGVDYISV 302 (320)
T ss_dssp SSH--HHH---HHHHHTTCSEEEEESCCHHHHH-HHHHH---HT--TS-SEEEEESSCCHHHHHHHH----TTTCSEEEC
T ss_pred CCH--HHH---HHHHHCCCCEEEECCCCHHHHH-HHHHH---HC--CC-EEEEEECCCCHHHHHHHH----HCCCCEEEC
T ss_conf 868--999---9998538888986589999999-99997---58--97-799997899899999999----819899987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 4643146566666655677732168985
Q gi|254780455|r 354 GTNLTNDFDGCTPYQNLQTEKLQIVCKV 381 (418)
Q Consensus 354 GT~Lt~d~~~~~~~~~~~~~~l~~VyKl 381 (418)
|.- ..+.|++++-+++
T Consensus 303 Gal------------t~~a~~lDisl~i 318 (320)
T 3paj_A 303 GAL------------TKHLKALDLSMRF 318 (320)
T ss_dssp THH------------HHSBCCCCEEEEE
T ss_pred CHH------------HCCCCCCCEEEEE
T ss_conf 976------------6699654227895