HHSEARCH alignment of GI: 254780455 and SCOP domain: d1vlpa1

Alignment
>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=7e-41  Score=296.71  Aligned_cols=135  Identities=32%  Similarity=0.490  Sum_probs=120.9

Q ss_pred             CCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf             67100124401178999999999848996599999965887554400002369999999971699989999998377755
Q gi|254780455|r    8 SDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLRITEKERKWLVENSFYG   87 (418)
Q Consensus         8 ~~piI~SlLdTD~YkltM~~a~~~~~~~~~v~f~~~~R~~~~~~~~~~v~~gL~~~i~~l~~~rft~eei~yL~~~~~~~   87 (418)
                      ++|||+|+||||+|||||+||||+++|+++|+|+||+|++| ..++|.+++||+++|++|+++|||++|++||++.+   
T Consensus         2 ~~pii~SlLdTDlYklTM~qa~~~~~~~~~a~f~~~~R~~p-~~~~~~~~~gl~~~i~~l~~lrFt~eel~yL~~~~---   77 (149)
T d1vlpa1           2 SEPVIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQ-LTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEI---   77 (149)
T ss_dssp             CCCSCCCTTSSBHHHHHHHHHHHHHCTTCEEEEEEEESCTT-CCBCHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHC---
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC-CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC---
T ss_conf             97523433311889999999999868997699999973899-87417899999999999986799999999998738---


Q ss_pred             CCCCCCHHHHHHHHHCCCCCC------EEE------ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             555789889999750899841------687------3399269998548778677888999999888887753
Q gi|254780455|r   88 KKQLFEPKFLSWLSDFQLPEY------DLS------HKKGQYVLNFHGLWKDVTLWEIPSLIIISTLYSRITV  148 (418)
Q Consensus        88 ~~~~~~~~fl~~L~~~~f~~~------~~~------~~eg~~~i~ieGp~~~~~l~EtplL~iine~~~~~~~  148 (418)
                        ++++++|++||+++||++.      ...      +.+++|.|+|+|||.+||||||||||||||+|++.+.
T Consensus        78 --~~~~~~fl~~L~~~rF~~dp~~~v~~~~~~~~~~~~~~~l~i~v~Gp~~~~~L~EtplLaIinE~y~~~~d  148 (149)
T d1vlpa1          78 --PYLPSAYIKYISSSNYKLHPEEQISFTSEEIEGKPTHYKLKILVSGSWKDTILYEIPLLSLISEAYFKFVD  148 (149)
T ss_dssp             --TTSCHHHHHHHHSTTCCCCHHHHEEEEEEEETTEEEEEEEEEEEEEEHHHHTTSHHHHHHHHHHHHHHHTC
T ss_pred             --CCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             --88898999999858867780002577256567667788547999857999999999999999988741036


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Nicotinate/Quinolinate PRTase N-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
domain: Nicotinate phosphoribosyltransferase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]