RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780455|ref|YP_003064868.1| nicotinate
phosphoribosyltransferase [Candidatus Liberibacter asiaticus str.
psy62]
         (418 letters)



>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase,
           C-terminal domain {Agrobacterium tumefaciens [TaxId:
           358]}
          Length = 266

 Score =  300 bits (769), Expect = 2e-82
 Identities = 158/260 (60%), Positives = 200/260 (76%)

Query: 154 FSVDLLYAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLG 213
           F++D+LYA+AK K+W K+ +L+   GL+I DFGTRRRHS  WQ+WC+EAL+EGI  +F G
Sbjct: 3   FTLDVLYARAKAKMWEKVERLRELPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTG 62

Query: 214 TSNALLAMNYKINAIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLP 273
           TSN LLAM+  + A+GT+AHELPMV AA+ +T+ E   APYQ+++ WNRLY  NLLIVLP
Sbjct: 63  TSNVLLAMDSDLEAVGTNAHELPMVVAALAQTNEELAAAPYQVLKDWNRLYGGNLLIVLP 122

Query: 274 DSFGTDFFLEHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDV 333
           D+FGT  FL +AP W+  W GFR DSA PIEGGEKII WW+KM  +P+ K L+FSD LDV
Sbjct: 123 DAFGTAAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEWWRKMGRDPRTKMLIFSDGLDV 182

Query: 334 DSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLS 393
           D+I+ TY+HFE RV+M FGWGTNLTNDF GC P      + + IVCKV+ AN + AVKLS
Sbjct: 183 DAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKLS 242

Query: 394 DDPAKTTGDISEIKRYLKIF 413
           D+P K TGD +E++RYLK F
Sbjct: 243 DNPQKATGDPAEVERYLKFF 262


>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase,
           C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 255

 Score =  241 bits (617), Expect = 7e-65
 Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 19/263 (7%)

Query: 161 AQAKKKLWSKIIKLK------NFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGT 214
            QA+++L  K   L+        +G K+ DFGTRRR S    +  +  L+E     F+GT
Sbjct: 4   EQARERLQEKFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGT 63

Query: 215 SNALLAMNYKINAIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLPD 274
           SN  LA    +  +GT AHE  M    +        ++    +  W R Y   L I L D
Sbjct: 64  SNVHLARKLDLKPLGTMAHEWLMAHQQLGP---RLIDSQSAALDCWVREYRGLLGIALTD 120

Query: 275 SFGTDFFLEHAPSWM-TQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDV 333
              TD FL     +    + G RHDS  P+   EK IA + K+  +P  K LVFSD LD+
Sbjct: 121 CITTDAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDL 180

Query: 334 DSIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLS 393
              +  Y+  + R+ + FG GT+ T D  G  P        + IV K++  N     K+S
Sbjct: 181 PRALKIYRALQGRINVSFGIGTHFTCDLPGVEP--------MNIVVKMSACNGHPVAKIS 232

Query: 394 DDPAKTTGDISEIKRYLK-IFKI 415
           D P K      +   YLK +F++
Sbjct: 233 DTPGKAQCRDPDFIHYLKHVFQV 255


>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase,
           C-terminal domain {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 266

 Score =  225 bits (575), Expect = 4e-60
 Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 16/265 (6%)

Query: 160 YAQAKKKLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDS-------FL 212
           Y    ++   K   L + +G++  +FGTRRR SL  Q   ++ + + +  +        L
Sbjct: 4   YENQLEQAEKKAETLFD-NGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLL 62

Query: 213 GTSNALLAMNYKINAIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYD-DNLLIV 271
           GTSN L A  Y +  IGT AHE  M  A+I+    +  +A    M  W   +   N  + 
Sbjct: 63  GTSNILFAKKYGVKPIGTVAHEWVMGVASISE---DYLHANKNAMDCWINTFGAKNAGLA 119

Query: 272 LPDSFGTDFFL-EHAPSWMTQWKGFRHDSASPIEGGEKIIAWWKKMNCNPQ-NKFLVFSD 329
           L D+FGTD FL    P +   + G R DS  P+E  +KI   +  +   P+ +K + +SD
Sbjct: 120 LTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDVLKLPKFSKIICYSD 179

Query: 330 NLDVDSIIYTYKHF-ENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKH 388
           +L+V+  I       EN +   FG GTN TNDF   +    +++E L IV K+ + N  H
Sbjct: 180 SLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKS-EPQVKSEPLNIVIKLLEVNGNH 238

Query: 389 AVKLSDDPAKTTGDISEIKRYLKIF 413
           A+K+SD+  K  GD + +KR  +  
Sbjct: 239 AIKISDNLGKNMGDPATVKRVKEEL 263


>d1ybea2 d.41.2.2 (A:8-167) Nicotinate phosphoribosyltransferase,
           N-terminal domain {Agrobacterium tumefaciens [TaxId:
           358]}
          Length = 160

 Score =  166 bits (422), Expect = 3e-42
 Identities = 88/143 (61%), Positives = 113/143 (79%)

Query: 9   DPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVR 68
           DPI+ SL+DTDFYK+LMLQ+IWK YP++  TFSL NR   + L+++IDE ELR QLDH R
Sbjct: 18  DPIVRSLIDTDFYKLLMLQMIWKLYPEVDATFSLINRTKTVRLAEEIDEMELREQLDHAR 77

Query: 69  SLRITEKERKWLVENSFYGKKQLFEPKFLSWLSDFQLPEYDLSHKKGQYVLNFHGLWKDV 128
           +LR+++KE  WL  N+FYG+ Q+FEP+FLSWLS +QLPEY+L  + GQY LNFHG W D 
Sbjct: 78  TLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLSSYQLPEYELFKRDGQYELNFHGRWMDT 137

Query: 129 TLWEIPSLIIISTLYSRITVRSM 151
           TLWEIP+L II+ L SR  +RS+
Sbjct: 138 TLWEIPALSIINELRSRSAMRSL 160


>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase,
           N-terminal domain {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 149

 Score =  136 bits (343), Expect = 4e-33
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 18/152 (11%)

Query: 8   SDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHV 67
           S+P+I SLLDTD YKI M   ++  +PD+ VT+   NR +QL  + +     L+ Q  ++
Sbjct: 2   SEPVIKSLLDTDMYKITMHAAVFTNFPDVTVTYKYTNRSSQLTFNKEAIN-WLKEQFSYL 60

Query: 68  RSLRITEKERKWLVENSFYGKKQLFEPKFLSWLSDF----------QLPEYDLSHKKGQY 117
            +LR TE+E ++L +   Y         ++ ++S                 ++  K   Y
Sbjct: 61  GNLRFTEEEIEYLKQEIPY-----LPSAYIKYISSSNYKLHPEEQISFTSEEIEGKPTHY 115

Query: 118 VLNF--HGLWKDVTLWEIPSLIIISTLYSRIT 147
            L     G WKD  L+EIP L +IS  Y +  
Sbjct: 116 KLKILVSGSWKDTILYEIPLLSLISEAYFKFV 147


>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase,
           N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 141

 Score =  131 bits (331), Expect = 1e-31
 Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 11/140 (7%)

Query: 8   SDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHV 67
           S+ I+ +LLDTDFYK+ M+Q +   YP+ +V +    R  +     ++    +R QL+++
Sbjct: 6   SERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCRNQEDL---RLYLPAIREQLEYL 62

Query: 68  RSLRITEKERKWLVENSFYGKKQLFEPKFLSWLSDFQLP--EYDLSHKKGQYVLNFHGLW 125
             L I++++  +L    F        P F+ +L  F+          +  ++ L   G W
Sbjct: 63  AGLAISDEQLAFLERIPF------LAPDFIRFLGLFRFNPRYVQTGIENDEFFLRLKGPW 116

Query: 126 KDVTLWEIPSLIIISTLYSR 145
             V L+E+P L +IS + +R
Sbjct: 117 LHVILFEVPLLAMISEVRNR 136


>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase
           Ta1145 {Thermoplasma acidophilum [TaxId: 2303]}
          Length = 270

 Score =  115 bits (290), Expect = 6e-27
 Identities = 32/224 (14%), Positives = 62/224 (27%), Gaps = 35/224 (15%)

Query: 179 GLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMV 238
                 FG RR H          A   G      G S  L A     + +GT  H L ++
Sbjct: 13  DSPFFSFGIRRMHPAISPMIDRSAYIGG----ADGVSGILGAKLIDQDPVGTMPHALSIM 68

Query: 239 AAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFLEH-APSWMTQWKGFRH 297
                                     +    ++L D++  + F          +    R 
Sbjct: 69  LGDEEAWK-----------LTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRL 117

Query: 298 DSASPIEGGEKIIAWWKKMNCNP---QNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGWG 354
           D+ S   G  + +    +         +  ++ S  LD +++    +         FG G
Sbjct: 118 DTPSSRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAE----AFGVG 173

Query: 355 TNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSDDPAK 398
           T++++             +       + + N K   K      +
Sbjct: 174 TSISSA------------KPFDFAMDIVEVNGKPETKRGKMSGR 205


>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate
           phosphoribosyltransferase EF2626 {Enterococcus faecalis
           [TaxId: 1351]}
          Length = 345

 Score =  110 bits (277), Expect = 2e-25
 Identities = 46/232 (19%), Positives = 80/232 (34%), Gaps = 37/232 (15%)

Query: 179 GLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMV 238
              +++FGTRR   L    W   A   G       TSN      + I   GT AH L   
Sbjct: 14  DDPLLEFGTRRAQELDAAIWGTRAAYIG---GADATSNVRAGKIFGIPVSGTHAHSLVQS 70

Query: 239 AAAITRTDIETQNAPYQMMQQWNRLY-DDNLLIVLPDSF--GTDFFLEHAPSWMTQ--WK 293
                          Y+    + + + D   L+   D+   G    +  A     +  + 
Sbjct: 71  YG-----------NDYEAFMAYAKTHRDCVFLVDTYDTLKAGVPSAIRVAREMGDKINFL 119

Query: 294 GFRHDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFGW 353
           G R DS       +++     +         +  S++LD ++I+   K  ++++ + +G 
Sbjct: 120 GVRIDSGDMAYISKRVREQLDEAGFTE--AKIYASNDLDENTILN-LKMQKSKIDV-WGV 175

Query: 354 GTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHA-----VKLSDDPAKTT 400
           GT L   +D            L  V K+     +       +KLS +  K T
Sbjct: 176 GTKLITAYDQPA---------LGAVFKLVSIEGEDGQMKDTIKLSSNAEKVT 218


>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide
           pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId:
           2261]}
          Length = 279

 Score = 89.3 bits (221), Expect = 5e-19
 Identities = 34/226 (15%), Positives = 61/226 (26%), Gaps = 38/226 (16%)

Query: 179 GLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKINAIGTSAHELPMV 238
              +  FG R  H          A   G      G S  L A      A+GT  H L + 
Sbjct: 18  FKPVYSFGIRHMHPAIAPMIDRAAFIGG----CDGVSGVLGAEMMGEKAVGTMPHALIIT 73

Query: 239 AAAITRTDIETQNAPYQMMQQWNRLYDDN-LLIVLPDSF--GTDFFLEHAPSWMTQWKGF 295
                           +  + ++ + ++    I L D+F       +  A +   +    
Sbjct: 74  V-----------GDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAEALGKKLFAV 122

Query: 296 RHDSASPIEGGEKIIAWWKKMNCN---PQNKFLVFSDNLDVDSIIYTYKHFENRVQMIFG 352
           R D+ S   G  + I    +            +  S  LD + I       +      FG
Sbjct: 123 RLDTPSSRRGNFRKIIEEVRWELKVRGYDWVKIFVSGGLDEEKIKEIVDVVD-----AFG 177

Query: 353 WGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKLSDDPAK 398
            G  + +             + +     + +   K   K      +
Sbjct: 178 VGGAIAS------------AKPVDFALDIVEVEGKPIAKRGKLSGR 211


>d2f7fa2 d.41.2.1 (A:4-140) Putative nicotinate
           phosphoribosyltransferase EF2626 {Enterococcus faecalis
           [TaxId: 1351]}
          Length = 137

 Score = 88.4 bits (219), Expect = 1e-18
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 14/135 (10%)

Query: 13  SSLLDTDFYKILMLQLIWK-FYPDIKVTFSLFNRQTQLHLSDKIDESELRTQLDHVRSLR 71
           S  L TD Y+I M+Q  W+    D+   F  + R+   +    I    L   ++++ +L 
Sbjct: 6   SLTLHTDMYQINMMQTYWELGRADLHAVFECYFREMPFNHGYAIFA-GLERLVNYLENLT 64

Query: 72  ITEKERKWLVENSFYGKKQLFEPKFLSWLSDFQLPEYDLSHKKGQYV------LNFHGLW 125
            TE +  +L E         +   FL++L++F+      S  +G  V      +   G  
Sbjct: 65  FTESDIAYLREVEE------YPEDFLTYLANFEFKCTVRSALEGDLVFNNEPLIQIEGPL 118

Query: 126 KDVTLWEIPSLIIIS 140
               L E   L +++
Sbjct: 119 AQCQLVETALLNMVN 133


>d1ytda2 d.41.2.1 (A:1-119) Nicotinate phosphoribosyltransferase
          Ta1145 {Thermoplasma acidophilum [TaxId: 2303]}
          Length = 119

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 10/46 (21%), Positives = 16/46 (34%)

Query: 1  MKEYFSTSDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQ 46
          M  + + SD  I   L +D Y    +  I     D++V        
Sbjct: 1  MNVFNTASDEDIKKGLASDVYFERTISAIGDKCNDLRVAMEATVSG 46


>d2i14a2 d.41.2.1 (A:1-110) Nicotinate-nucleotide
          pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId:
          2261]}
          Length = 110

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 8/46 (17%), Positives = 18/46 (39%)

Query: 1  MKEYFSTSDPIISSLLDTDFYKILMLQLIWKFYPDIKVTFSLFNRQ 46
          MK ++  ++  I +   TD Y +   +++       KV   +    
Sbjct: 1  MKRFYIANEDEIKAGKTTDVYFLRTKKILEVKNIRKKVLADVTTTS 46


>d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin
           (erythrocruorin), subunit III (globin C) {Common
           earthworm (Lumbricus terrestris) [TaxId: 6398]}
          Length = 149

 Score = 27.1 bits (59), Expect = 2.8
 Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 3/50 (6%)

Query: 258 QQWNRLYDDNLLIVLPDSFGTDFF---LEHAPSWMTQWKGFRHDSASPIE 304
           +QW+ L+ D     +   FG        +  P     +K    + A   +
Sbjct: 15  KQWDILWRDTESSKIKIGFGRLLLTKLAKDIPEVNDLFKRVDIEHAEGPK 64


>d1sk7a_ a.132.1.2 (A:) Heme oxygenase HemO (PigA) {Pseudomonas
           aeruginosa [TaxId: 287]}
          Length = 187

 Score = 26.2 bits (57), Expect = 4.7
 Identities = 8/42 (19%), Positives = 13/42 (30%), Gaps = 7/42 (16%)

Query: 255 QMMQQWNRLYDDNLLIVLPDSFGTDFFLEHAPSWMTQWKGFR 296
            + ++   L        L ++FG     E        WK F 
Sbjct: 117 FLFKKAAALE-------LDENFGARHLAEPEGGRAQGWKSFV 151


>d2evra1 b.34.11.3 (A:13-86) Cell wall-associated hydrolase Spr
           N-terminal domain {Nostoc punctiforme [TaxId: 272131]}
          Length = 74

 Score = 26.3 bits (58), Expect = 4.7
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 10/58 (17%)

Query: 46  QTQLHLSDKIDESELRTQLDHVRSLRITEKERK--WLVENSFYGKKQLFEPKFLSWLS 101
              L+L D  + + L TQ    R L +T   +     V         L E  +  WLS
Sbjct: 8   LADLNLFDSPECTRLATQSASGRHLWVTSNHQNLAVEV--------YLCEDDYPGWLS 57


>d1eara2 d.58.38.1 (A:75-142) Urease metallochaperone UreE,
          C-terminal domain {Bacillus pasteurii [TaxId: 1474]}
          Length = 68

 Score = 25.8 bits (57), Expect = 6.8
 Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 11/50 (22%)

Query: 36 IKVTFSLFNRQTQLHLSDKIDESELRTQLDHV-------RSLRITEKERK 78
           K+ F + NR    H    I++ E+  + D           +   + ER+
Sbjct: 16 GKMAFEIGNR----HTMCIIEDDEILVRYDKTLEKLIDEVGVSYEQSERR 61


>d1jkva_ a.25.1.3 (A:) Manganese catalase (T-catalase)
           {Lactobacillus plantarum [TaxId: 1590]}
          Length = 266

 Score = 25.7 bits (56), Expect = 7.0
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 372 TEKLQIVCKVTKANDKHAVKLSDDPAKTTGDISEIKRYL 410
           T KLQ   K  +++   A +L +      G+ + +  YL
Sbjct: 5   TRKLQYNAKPDRSDPIMARRLQESLGGQWGETTGMMSYL 43


>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
           {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 341

 Score = 25.3 bits (54), Expect = 8.9
 Identities = 22/264 (8%), Positives = 56/264 (21%), Gaps = 21/264 (7%)

Query: 166 KLWSKIIKLKNFSGLKIVDFGTRRRHSLTWQKWCIEALQEGIKDSFLGTSNALLAMNYKI 225
                ++  K +S  K +    R           ++ +        +  S      +   
Sbjct: 58  DEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNAT 117

Query: 226 NAIGTSAHELPMVAAAITRTDIETQNAPYQMMQQWNRLYDDNLLIVLPDSFGTDFFL-EH 284
           N  G     + + A            +             ++ +      +    ++ E 
Sbjct: 118 NIDGF--LNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNEL 175

Query: 285 APSWMTQWKGFR----------HDSASPIEGGEKIIAWWKKMNCNPQNKFLVFSDNLDVD 334
                ++  GF                P      +I  W        +   +  D     
Sbjct: 176 YADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSR 234

Query: 335 SIIYTYKHFENRVQMIFGWGTNLTNDFDGCTPYQNLQTEKLQIVCKVTKANDKHAVKL-- 392
              Y     +  +             ++     +    +    +      N     +   
Sbjct: 235 DFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV 294

Query: 393 -----SDDPAKTTGDISEIKRYLK 411
                  D   +  DIS+  + L 
Sbjct: 295 YRDFREGDVRHSLADISKAAKLLG 318


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0647    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,631,488
Number of extensions: 77315
Number of successful extensions: 231
Number of sequences better than 10.0: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 28
Length of query: 418
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 330
Effective length of database: 1,199,356
Effective search space: 395787480
Effective search space used: 395787480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (24.8 bits)