HHsearch alignment for GI: 254780456 and conserved domain: COG1096

>COG1096 Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis].

Probab=97.76  E-value=0.00015  Score=44.81  Aligned_cols=72  Identities=21%  Similarity=0.345  Sum_probs=47.8

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCEEEECC-----------CEEEEEEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCCE
Q ss_conf             0112223302467887531471777448-----------31578864202444443311332697258999987476527
Q gi|254780456|r  192 VQKLEEGQVIEGTVKNITDYGVFVDLSG-----------VDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHR  260 (576)
Q Consensus       192 ~~~l~~G~~v~g~V~~i~~~g~~V~~~g-----------~~g~i~~~~ls~~~~~~~~~~~~~G~~v~~~Vl~~d~~~~~  260 (576)
T Consensus        59 ~~~~K~GdiV~grV~~v~~~~a~V~i~~ve~~~r~~~~~~~~~ihvs~~~~~~~~~~~d~f~~GDivrA~Vis~~---~~  135 (188)
T COG1096          59 PPLPKGGDIVYGRVTDVREQRALVRIVGVEGKERELATSGAADIHVSQVRDGYVEKLSDAFRIGDIVRARVISTG---DP  135 (188)
T ss_pred             CCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC---CC
T ss_conf             776898879999995326608999999994333367887402589782023111020134464617999998617---87


Q ss_pred             EEEEEC
Q ss_conf             998521
Q gi|254780456|r  261 ISLGMK  266 (576)
Q Consensus       261 i~lslK  266 (576)
T Consensus       136 ~~Lst~  141 (188)
T COG1096         136 IQLSTK  141 (188)
T ss_pred             EEEEEC
T ss_conf             189852