HHsearch alignment for GI: 254780456 and conserved domain: COG1098

>COG1098 VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis].

Probab=99.67  E-value=5.1e-17  Score=120.41  Aligned_cols=78  Identities=37%  Similarity=0.705  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEEEEEEECCCCEEEE-CCCEEEEEEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCC
Q ss_conf             122233024678875314717774-4831578864202444443311332697258999987476527998521555432
Q gi|254780456|r  194 KLEEGQVIEGTVKNITDYGVFVDL-SGVDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHRISLGMKQLEKNP  272 (576)
Q Consensus       194 ~l~~G~~v~g~V~~i~~~g~~V~~-~g~~g~i~~~~ls~~~~~~~~~~~~~G~~v~~~Vl~~d~~~~~i~lslK~l~~dp  272 (576)
T Consensus         2 ~~kvG~~l~GkItgI~~yGAFV~l~~g~tGLVHISEIa~~fVkdI~d~L~vG~eV~vKVl~ide-~GKisLSIr~~~e~p   80 (129)
T COG1098           2 SMKVGSKLKGKITGITPYGAFVELEGGKTGLVHISEIADGFVKDIHDHLKVGQEVKVKVLDIDE-NGKISLSIRKLEEEP   80 (129)
T ss_pred             CCCCCCEEEEEEEEEEECCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEECC-CCCCCEEHHHHHHCC
T ss_conf             7534646788897567433489823997314883575443677399884278879999972146-897033568766474