HHsearch alignment for GI: 254780456 and conserved domain: COG1530
>COG1530 CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis].
Probab=96.47 E-value=0.025 Score=31.36 Aligned_cols=60 Identities=20% Similarity=0.235 Sum_probs=41.4
Q ss_pred CCCCCCEEEEEEEEEEC--CEEEEEECCCEEEEEEHHHHCCC-------CCCCCCCCCCEEEEEEEEEE
Q ss_conf 63898779999999819--98999947960367899750566-------43556378987999999974
Q gi|254780456|r 23 DLAENCVTKGIVVGLEK--DTVVVDVGLKFEGRIPRREFMGK-------GQYTPIKVGDEVEVYVERTE 82 (576)
Q Consensus 23 ~~~~G~iv~G~V~~i~~--~~v~vdig~k~~G~i~~~e~~~~-------~~~~~~kvGd~i~v~V~~~~ 82 (576)
T Consensus 34 ~~~~gniy~grv~~i~p~~~aafvdig~~r~gfl~~~~~~~~~~~~~~~~i~~~lr~~~~~~Vqv~ke~ 102 (487)
T COG1530 34 EQIVGNIYKGRVTRVLPSLEAAFVDIGLERNGFLHLSEIVPYFRAVLEEKIKVRLRGGQATLVQVVKEP 102 (487)
T ss_pred EEEECCCEEEEECCCCCCCHHHEEECCCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCEEEEEEEEEC
T ss_conf 763067168886231766322205516876606884105534420002350055417862899998625