HHsearch alignment for GI: 254780456 and conserved domain: COG2183
>COG2183 Tex Transcriptional accessory protein [Transcription].
Probab=99.48 E-value=6.5e-14 Score=101.61 Aligned_cols=77 Identities=34% Similarity=0.604 Sum_probs=67.2
Q ss_pred CCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHH
Q ss_conf 012222213699999850169997068841354005530012200123421112342268852156545532011322
Q gi|254780456|r 365 KSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQL 442 (576)
Q Consensus 365 ~~~~~G~~v~g~V~~v~~~g~~V~l~~~i~g~i~~~dls~~~~~~~~~~~~k~G~~i~~~Vl~id~~~~~i~LS~K~l 442 (576)
T Consensus 654 ~dLk~Gm~leg~Vrnv~~fgafVdIgv~qDglvHis~ls-~~fv~~P~~vv~vGdiV~v~V~~vD~~r~rI~Lsmr~~ 730 (780)
T COG2183 654 TDLKPGMILEGTVRNVVDFGAFVDIGVHQDGLVHISQLS-DKFVKDPNEVVKVGDIVKVKVIEVDTARKRIALSMRLD 730 (780)
T ss_pred HHCCCCCEEEEEEEEEEECCCEEEECCCCCEEEEHHHHH-HHHCCCHHHHCCCCCEEEEEEEEEECCCCEEEEEEECC
T ss_conf 650678888899887543164689456666066689854-33307958840158779999999851457232476346