HHsearch alignment for GI: 254780456 and conserved domain: KOG1856

Probab=98.23  E-value=2.5e-06  Score=55.59  Aligned_cols=82  Identities=26%  Similarity=0.352  Sum_probs=69.1

Q ss_pred             CCCCCCCEEEEEEEEEECC-EEEEEECCCCCEEEEEEHHHCCHHHHCCCHHHCCCCCEEEEEEEEECCCCCEEEEEEHHH
Q ss_conf             0047898799999997089-089996177984999997471821210420110689879999999705768699870365
Q gi|254780456|r  454 SSLRKNDVVSCEVISVSEG-GIEVSLIDHKGINSFIRRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSLSIKAL  532 (576)
Q Consensus       454 ~~~~~G~iv~g~V~~v~~~-G~~V~l~~~~gv~G~i~~s~is~~~~~~~~~~~~vG~~v~~~Vi~id~~~~ri~LS~k~~  532 (576)
T Consensus       981 et~~~g~iV~~~V~~vt~rr~~Cv~v~ld~G~~g~i~~~~~Sd~~v~~p~~~v~vgq~v~~kvi~id~e~f~v~Ls~r~s 1060 (1299)
T KOG1856         981 ETFYEGAIVPVTVTKVTHRRGICVRVRLDCGVTGFILAKNLSDRDVRRPENRVKVGQTVYCKVIKIDKERFSVELSCRTS 1060 (1299)
T ss_pred             HHHCCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCCHHHCCCHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHH
T ss_conf             67356756777556787156531578742787315443336734215877751147627999653328545531100148


Q ss_pred             HHH
Q ss_conf             577
Q gi|254780456|r  533 EIA  535 (576)
Q Consensus       533 ~~~  535 (576)
T Consensus      1061 dlk 1063 (1299)
T KOG1856        1061 DLK 1063 (1299)
T ss_pred             HHH
T ss_conf             765