HHsearch alignment for GI: 254780456 and conserved domain: PRK04163

Probab=98.17  E-value=4.5e-05  Score=48.05  Aligned_cols=105  Identities=20%  Similarity=0.286  Sum_probs=75.9

Q ss_pred             EECCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC--CCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCCC
Q ss_conf             33269725899998747652799852155543210000000--4896658999981596699985142000000111101
Q gi|254780456|r  240 VLSIGQQVKVKIIRINQETHRISLGMKQLEKNPWDDVQDKY--VEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISW  317 (576)
Q Consensus       240 ~~~~G~~v~~~Vl~~d~~~~~i~lslK~l~~dp~~~~~~~~--~~G~~v~g~V~~v~~~G~~V~l~~~v~G~i~~sels~  317 (576)
T Consensus        27 ty~~~~~i~As~~G~v~~~~k~-v~ViPl~g--------rY~P~~GD~VIG~V~~v~~~~W~VDI~s~~~a~L~~s~~~~   97 (232)
T PRK04163         27 TYVEGGKIYSSVVGLVEIKDDK-VRVIPLEG--------KYIPKKGDLVIGKVTDVGFSGWEVDINSPYKAILPVSEVLG   97 (232)
T ss_pred             EEEECCEEEEEEEEEEEEECCE-EEEEECCC--------CCCCCCCCEEEEEEEEECCCEEEEECCCCCEEEECHHHCCC
T ss_conf             5998999999998889997999-99998985--------10587699899999983187179986996055852444566


Q ss_pred             CC---CCCCCCCEECCCCEEEEEEEEEECCCCEEEEEEEC
Q ss_conf             11---35574210037845799999862155047875203
Q gi|254780456|r  318 TK---KNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQ  354 (576)
Q Consensus       318 ~~---~~~~~~~~~~~G~~v~~~Vl~id~~~~~i~lS~k~  354 (576)
T Consensus        98 r~~~~~~~~mr~~l~~GDlI~ArV~~v~~~~-~~~Lt~k~  136 (232)
T PRK04163         98 RPVDVESTDLRKYLDIGDYIIAKVKDVDETK-DVVLTLKG  136 (232)
T ss_pred             CCCCCCHHHHHHHCCCCCEEEEEEEEECCCC-CEEEEECC
T ss_conf             5555643567751788988999999966899-78999548