HHsearch alignment for GI: 254780456 and conserved domain: PRK07400
>PRK07400 30S ribosomal protein S1; Reviewed.
Probab=100.00 E-value=0 Score=463.05 Aligned_cols=298 Identities=29% Similarity=0.478 Sum_probs=275.1
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEHHHHCCC---CCCCCCCCCCEEEEEEEEEE
Q ss_conf 106889999885402146389877999999981998999947960367899750566---43556378987999999974
Q gi|254780456|r 6 PSREDFATLLEESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGK---GQYTPIKVGDEVEVYVERTE 82 (576)
Q Consensus 6 ~~~~~f~~ll~~~~~~~~~~~G~iv~G~V~~i~~~~v~vdig~k~~G~i~~~e~~~~---~~~~~~kvGd~i~v~V~~~~ 82 (576)
T Consensus 13 ~~~edF~~lLe~~~--~~~k~GdiVeG~V~~I~~~~v~VdiG~k~eG~i~~~E~s~~~~~~~~e~~~vGd~iev~V~~~~ 90 (314)
T PRK07400 13 FTHEDFAALLDKYD--YHFKPGDIVNGTVFSLEPKGALIDIGAKTAAFMPLQEMSINRVEGPSEVLQPGETREFFILSEE 90 (314)
T ss_pred CCHHHHHHHHHHHH--CCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 69999999998752--3699999899999999799899997798079999999366656894301358976999999985
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCEEEECC
Q ss_conf 79985999687875557589999985289769999999967955999744020000011234543334555553023111
Q gi|254780456|r 83 NSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEI 162 (576)
Q Consensus 83 ~~~g~i~lS~~k~~~~~~~~~i~~a~~~g~~v~g~V~~~~k~G~~V~i~gi~~FlP~s~~~~~~~~d~~~~vG~~i~~~I 162 (576)
T Consensus 91 ~~~g~i~LS~k~~~~~~~w~~l~~~~~~~~~V~gkV~~~~kgG~~V~i~gl~gFiP~Sqls~~~~~~--~~vG~~~~~kI 168 (314)
T PRK07400 91 NEDGQLTLSIRRIEYMRAWERVRQLQKEDATVRSEVFATNRGGALVRIEGLRGFIPGSHISTRKPKE--ELVGEELPLKF 168 (314)
T ss_pred CCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEECCEEEEEEHHHCCCCCCCH--HHCCCEEEEEE
T ss_conf 6889689986043212069999977325987999999996384899976865685524516355632--10697688999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCEEEEEEEECCCCCCCCCCEEEC
Q ss_conf 33543233112212111222221211100011222330246788753147177744831578864202444443311332
Q gi|254780456|r 163 LKMDKRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLS 242 (576)
Q Consensus 163 i~~d~~~~~ivvS~k~~l~~~~~~~~~~~~~~l~~G~~v~g~V~~i~~~g~~V~~~g~~g~i~~~~ls~~~~~~~~~~~~ 242 (576)
T Consensus 169 ieid~~~~rivlS~r~~l~e-------~~~~~l~vG~vv~G~V~~I~~fGaFVdigGvdGLlHiSeiSw~rv~~p~dv~k 241 (314)
T PRK07400 169 LEVDEERNRLVLSHRRALVE-------RKMNRLEVGEVVVGTVRGIKPYGAFIDIGGVSGLLHISEISHEHIETPHSVFN 241 (314)
T ss_pred EEEECCCCCEEEEEEHHHHH-------HHHHCCCCCCEEEEEEEEEECEEEEEEECCCEEEEEHHHCCCCCCCCHHHHCC
T ss_conf 99715668248998333201-------36750889988999999996408899978918999814616544489878267
Q ss_pred CCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCC
Q ss_conf 6972589999874765279985215554321000000048966589999815966999851420000001111
Q gi|254780456|r 243 IGQQVKVKIIRINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQI 315 (576)
Q Consensus 243 ~G~~v~~~Vl~~d~~~~~i~lslK~l~~dp~~~~~~~~~~G~~v~g~V~~v~~~G~~V~l~~~v~G~i~~sel 315 (576)
T Consensus 242 vGd~V~vkVi~iD~e~~rIsLSiK~l~~dPwd~i~~K~kvgd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (314)
T PRK07400 242 VNDQMKVMIIDLDAERGRISLSTKQLEPEPGDMLTDPQKVFDKAEEM-AAKYRQMLLEQAEGGEEPIEAAAEL 313 (314)
T ss_pred CCCEEEEEEEEECCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 99999999999738898899776665558477762577765899999-9999988765231441310012107