HHsearch alignment for GI: 254780456 and conserved domain: PRK08563

>PRK08563 DNA-directed RNA polymerase subunit E'; Provisional.
Probab=98.46  E-value=7.4e-07  Score=58.84  Aligned_cols=32  Identities=44%  Similarity=0.910  Sum_probs=11.8

Q ss_pred             CCEEEEEEEEEECCCCEEEECCCEEEEEEEEC
Q ss_conf             33024678875314717774483157886420
Q gi|254780456|r  198 GQVIEGTVKNITDYGVFVDLSGVDGLLHVTDI  229 (576)
Q Consensus       198 G~~v~g~V~~i~~~g~~V~~~g~~g~i~~~~l  229 (576)
T Consensus        82 ~EVv~g~V~~~~~~G~fv~~Gp~d~~vh~sqi  113 (182)
T PRK08563         82 QEVVEGEVVEVVEFGAFVRIGPVDGLLHISQI  113 (182)
T ss_pred             CCEEEEEEEEEECCEEEEEEECCCEEEEHHHC
T ss_conf             84899999999667699998466117609994