HHsearch alignment for GI: 254780456 and conserved domain: PRK08582

Probab=99.77  E-value=1.4e-18  Score=129.85  Aligned_cols=80  Identities=40%  Similarity=0.572  Sum_probs=42.2

Q ss_pred             CCCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             04896658999981596699985142000000111101113557421003784579999986215504787520345432
Q gi|254780456|r  280 YVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALINP  359 (576)
Q Consensus       280 ~~~G~~v~g~V~~v~~~G~~V~l~~~v~G~i~~sels~~~~~~~~~~~~~~G~~v~~~Vl~id~~~~~i~lS~k~~~~~p  359 (576)
T Consensus         3 ievG~iv~G~V~~I~~fGaFV~l~~g~~GLvHISeis~~-~V~~i~d~lkvGd~V~vKVi~id~-~gKI~LSiK~~~~~p   80 (139)
T PRK08582          3 IEVGSKLQGKVTGITNFGAFVELPEGKTGLVHISEVADN-YVKDINDHLSVGDEVEVKVLNVED-DGKIGLSIKKAKDRP   80 (139)
T ss_pred             CCCCCEEEEEEEEEECCEEEEEECCCCEEEEEHHHHCCC-CCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEHHHCCCCC
T ss_conf             447879999998996417899956996678873662566-568999957899999999998889-997051655545487


Q ss_pred             CC
Q ss_conf             10
Q gi|254780456|r  360 WE  361 (576)
Q Consensus       360 ~~  361 (576)
T Consensus        81 ~~   82 (139)
T PRK08582         81 RR   82 (139)
T ss_pred             CC
T ss_conf             65