HHsearch alignment for GI: 254780456 and conserved domain: PRK09521

>PRK09521 exosome complex RNA-binding protein Csl4; Provisional.

Probab=97.88  E-value=0.00027  Score=43.30  Aligned_cols=70  Identities=24%  Similarity=0.308  Sum_probs=48.7

Q ss_pred             CCCCCEEEEEEEEECCCEEEEEECC-----------CCEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEEEEECCCCEE
Q ss_conf             0489665899998159669998514-----------20000001111011135574210037845799999862155047
Q gi|254780456|r  280 YVEGSKVSGVVTNLTDYGVFVELQS-----------GIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRI  348 (576)
Q Consensus       280 ~~~G~~v~g~V~~v~~~G~~V~l~~-----------~v~G~i~~sels~~~~~~~~~~~~~~G~~v~~~Vl~id~~~~~i  348 (576)
T Consensus        62 p~vGdiVig~V~~v~~~~a~v~I~~v~g~~~~~l~~~~~g~i~i~~v~-~~~~~~~~d~fr~gDIVrAkVis~~~---~~  137 (187)
T PRK09521         62 LKKGDIVYGRVVDVKEQRALVRIVSIEGRGNRELATSKLGGIHISQVS-DGYVEDLTDAFKIGDIVRAKVISTTD---PI  137 (187)
T ss_pred             CCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCC-HHHHHHHHHHCCCCCEEEEEEEECCC---CE
T ss_conf             898999999999954767999999986868862565448888854378-66745267524878689999973598---46


Q ss_pred             EEEEE
Q ss_conf             87520
Q gi|254780456|r  349 SLGLK  353 (576)
Q Consensus       349 ~lS~k  353 (576)
T Consensus       138 ~Lst~  142 (187)
T PRK09521        138 QLSTK  142 (187)
T ss_pred             EEEEC
T ss_conf             99953