HHsearch alignment for GI: 254780456 and conserved domain: PRK11824
>PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional.
Probab=99.57 E-value=3.8e-15 Score=109.07 Aligned_cols=79 Identities=34% Similarity=0.477 Sum_probs=70.6
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHH
Q ss_conf 00012222213699999850169997068841354005530012200123421112342268852156545532011322
Q gi|254780456|r 363 FSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQL 442 (576)
Q Consensus 363 ~~~~~~~G~~v~g~V~~v~~~g~~V~l~~~i~g~i~~~dls~~~~~~~~~~~~k~G~~i~~~Vl~id~~~~~i~LS~K~l 442 (576)
T Consensus 615 i~~~~evG~iy~g~V~~i~~fGafve~~pg~~GLlHiSel~~~-rv~~v~d~~~~Gd~i~Vk~~~id~-~Gri~Lsrk~~ 692 (694)
T PRK11824 615 ITAEPEVGEIYEGKVVRIVDFGAFVEILPGKDGLVHISEIANE-RVEKVEDVLKEGDEVKVKVLEIDK-RGRIRLSRKAV 692 (694)
T ss_pred HCCCCCCCCEEEEEEEEEEECEEEEEECCCCEEEEEHHHCCCC-CCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEHHHH
T ss_conf 4576858977999999998441899967998068880024652-346864511689889999998989-99866664775
Q ss_pred H
Q ss_conf 1
Q gi|254780456|r 443 S 443 (576)
Q Consensus 443 ~ 443 (576)
T Consensus 693 l 693 (694)
T PRK11824 693 L 693 (694)
T ss_pred H
T ss_conf 1