HHsearch alignment for GI: 254780456 and conserved domain: TIGR03591
>TIGR03591 polynuc_phos polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family).
Probab=99.42 E-value=2.4e-13 Score=98.14 Aligned_cols=72 Identities=18% Similarity=0.372 Sum_probs=66.3
Q ss_pred HCCCCCCCEEEEEEEEEECCEEEEEECCCCCEEEEEEHHHCCHHHHCCCHHHCCCCCEEEEEEEEECCCCCEEEE
Q ss_conf 100478987999999970890899961779849999974718212104201106898799999997057686998
Q gi|254780456|r 453 VSSLRKNDVVSCEVISVSEGGIEVSLIDHKGINSFIRRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSL 527 (576)
Q Consensus 453 ~~~~~~G~iv~g~V~~v~~~G~~V~l~~~~gv~G~i~~s~is~~~~~~~~~~~~vG~~v~~~Vi~id~~~~ri~L 527 (576)
T Consensus 613 ~~~~evG~~y~g~V~~i~~fGafve~--~pg~~GLlHiSel~~~rv~~v~dv~~~Gd~i~Vk~~~id~-~Gri~L 684 (684)
T TIGR03591 613 TAEPEVGKIYEGKVVRIMDFGAFVEI--LPGKDGLVHISEIANERVEKVEDVLKEGDEVKVKVLEIDK-QGRIKL 684 (684)
T ss_pred CCCCCCCCEEEEEEEEEEECEEEEEE--CCCCCEEEEEECCCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCCCC
T ss_conf 16685897799999999844089996--7998147870013653446864521689889999997889-998285