HHsearch alignment for GI: 254780456 and conserved domain: TIGR03591
>TIGR03591 polynuc_phos polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family).
Probab=99.38 E-value=1.5e-12 Score=93.41 Aligned_cols=73 Identities=36% Similarity=0.503 Sum_probs=64.4
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 000122222136999998501699970688413540055300122001234211123422688521565455320
Q gi|254780456|r 363 FSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDIDVGKERISL 437 (576)
Q Consensus 363 ~~~~~~~G~~v~g~V~~v~~~g~~V~l~~~i~g~i~~~dls~~~~~~~~~~~~k~G~~i~~~Vl~id~~~~~i~L 437 (576)
T Consensus 612 ~~~~~evG~~y~g~V~~i~~fGafve~~pg~~GLlHiSel~~-~rv~~v~dv~~~Gd~i~Vk~~~id~-~Gri~L 684 (684)
T TIGR03591 612 ITAEPEVGKIYEGKVVRIMDFGAFVEILPGKDGLVHISEIAN-ERVEKVEDVLKEGDEVKVKVLEIDK-QGRIKL 684 (684)
T ss_pred HCCCCCCCCEEEEEEEEEEECEEEEEECCCCCEEEEEECCCC-CCCCCHHHHCCCCCEEEEEEEEECC-CCCCCC
T ss_conf 516685897799999999844089996799814787001365-3446864521689889999997889-998285