RPSBLAST alignment for GI: 254780456 and conserved domain: TIGR00717

>gnl|CDD|162009 TIGR00717, rpsA, ribosomal protein S1. This model provides trusted hits to most long form (6 repeat) examples of RpsA. Among homologs with only four repeats are some to which other (perhaps secondary) functions have been assigned. Length = 516

 Score =  538 bits (1387), Expect = e-153
 Identities = 259/522 (49%), Positives = 364/522 (69%), Gaps = 6/522 (1%)

Query: 9   EDFATLLEESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTPI 68
           E FA LLEES   ++     + KG VV + KDTV VDVGLK EGRIP+ EF        I
Sbjct: 1   ESFAQLLEESLKTEETRPGSIVKGTVVAINKDTVFVDVGLKSEGRIPKEEF--LDAPLEI 58

Query: 69  KVGDEVEVYVERTENSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTV 128
           +VGDEVEVY++R E+ FGE V SR+KA R  +W K+E  +  G  +EG I  +VKGG  V
Sbjct: 59  QVGDEVEVYLDRVEDRFGETVLSREKAQRHELWIKLEKAYEEGSIVEGKIVGKVKGGFIV 118

Query: 129 DLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMDKRRGNIVVSRRAVLEESRAEQR 188
           DLNG  AFLP SQ+D++P++D+  L+ +   F+I+K+D++R NIVVSRRA LEE R++ R
Sbjct: 119 DLNGVEAFLPGSQVDVKPIKDLDSLIGKTLKFKIIKLDQKRNNIVVSRRAYLEEERSQAR 178

Query: 189 SEIVQKLEEGQVIEGTVKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQVK 248
            E+++ L+EG V++G VKNITD+G FVDL GVDGLLH+TD++W R+ HPS+ + +GQ+VK
Sbjct: 179 EELLENLKEGDVVKGVVKNITDFGAFVDLGGVDGLLHITDMSWKRVKHPSEYVKVGQEVK 238

Query: 249 VKIIRINQETHRISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEG 308
           VK+I+ ++E  RISL +KQL ++PW+ ++ K+  G K++G VTNLTDYGVFVE++ GIEG
Sbjct: 239 VKVIKFDKEKGRISLSLKQLGEDPWEAIEKKFPVGDKITGRVTNLTDYGVFVEIEEGIEG 298

Query: 309 LAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHP 368
           L H+S++SW KKN HPSK++  G +VEV+IL+++P R+R+SLGLKQ   NPWE+F + HP
Sbjct: 299 LVHVSEMSWVKKNSHPSKVVKKGDEVEVMILDIDPERRRLSLGLKQCKANPWEQFEEKHP 358

Query: 369 PGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAKGDIVKAVVLDI 428
            G  V G++K  TDFG F+ L+  +DG+IHLSD+ W++ G +    Y KGD ++AVVL +
Sbjct: 359 VGDRVTGKIKKITDFGAFVELEGGIDGLIHLSDISWDKDGREADHLYKKGDEIEAVVLAV 418

Query: 429 DVGKERISLGVKQLSGSAPDVVDSVSSLRKNDVVSCEVISVSEGGIEVSLIDHKGINSFI 488
           D  K+RISLGVKQL+ +  +     +  +   VV  +V  + + G  V L    G+   I
Sbjct: 419 DKEKKRISLGVKQLTENPWEKF--AAKYKVGSVVKGKVTEIKDFGAFVELPG--GVEGLI 474

Query: 489 RRSDLSRDRVDQDPGRFSKGQIVDACVVNVSKKDGKVSLSIK 530
           R S+LS +R +        G  V+A VV++ KK+ KVSLS+K
Sbjct: 475 RNSELSENRDEDKTDEIKVGDEVEAKVVDIDKKNRKVSLSVK 516