RPSBLAST alignment for GI: 254780456 and conserved domain: PRK13806

>gnl|CDD|172339 PRK13806, rpsA, 30S ribosomal protein S1; Provisional. Length = 491
 Score =  310 bits (797), Expect = 5e-85
 Identities = 160/454 (35%), Positives = 248/454 (54%), Gaps = 11/454 (2%)

Query: 5   NPSREDFATLLE--ESFTKKDLAENCVTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGK 62
               E FA LLE  E   K +L       G V+ + +D+V VD G K +G + R E +  
Sbjct: 11  LDESESFAELLEAYEGERKTELRVGDKITGTVIAITEDSVFVDTGSKVDGVVDRAELLDA 70

Query: 63  GQYTPIKVGDEVEVYVERTENSFGEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQV 122
                + VGDEVE+YV        E   S+  + + G    +E  +  G  +EG +    
Sbjct: 71  DGELTVAVGDEVELYVVSVNG--QEIRLSKALSGQGGA-AMLEEAYENGVPVEGKVTGTC 127

Query: 123 KGGMTVDLNGEVAFLPRSQIDIRPVRDVTPLMHEPQLFEILKMDKRRGNIVVSRRAVLEE 182
           KGG  V++ G  AF P SQID+R V D    + +   F I ++++   NIVVSRRA+LE 
Sbjct: 128 KGGFNVEVLGRRAFCPVSQIDLRYVEDPESYVGQTFQFLITRVEENGRNIVVSRRALLER 187

Query: 183 SRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDLS-GVDGLLHVTDIAWHRILHPSKVL 241
            + E     ++ ++EG V+EGTV  +  +G FV+L+ GV+G++H+++++W R+    + +
Sbjct: 188 EQKEALEAFMETVKEGDVVEGTVTRLAPFGAFVELAPGVEGMVHISELSWSRVQKADEAV 247

Query: 242 SIGQQVKVKIIRINQETH----RISLGMKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYG 297
           S+G  V+VK++ I +       RISL +KQ   +PWD V D+   G KV+G V  L  +G
Sbjct: 248 SVGDTVRVKVLGIERAKKGKGLRISLSIKQAGGDPWDTVGDRLKAGDKVTGKVVRLAPFG 307

Query: 298 VFVELQSGIEGLAHISQISWTKKNIHPSKILSVGQQVEVVILEVNPARKRISLGLKQALI 357
            FVE+  GIEGL H+S++SWT++   P  +++ G  V V I +++PA++RISL L+ A  
Sbjct: 308 AFVEILPGIEGLVHVSEMSWTRRVNKPEDVVAPGDAVAVKIKDIDPAKRRISLSLRDAEG 367

Query: 358 NPWEEFSKSHPPGTEVEGEVKNKTDFGLFIGLDEHLDGMIHLSDLDWNRPGEKVIAEYAK 417
           +PW + ++   PGT V G V+ +  FGLF+ L   + G++  S +           +   
Sbjct: 368 DPWADVAERFAPGTTVTGTVEKRAQFGLFVNLAPGVTGLLPASVIS-RAGKPATYEKLKP 426

Query: 418 GDIVKAVVLDIDVGKERISLGVKQLSGSAPDVVD 451
           GD V  VV +ID  K +ISL     +GS  D  D
Sbjct: 427 GDSVTLVVEEIDTAKRKISLAPAGAAGSGADDDD 460