RPSBLAST alignment for GI: 254780456 and conserved domain: PRK00087

>gnl|CDD|178853 PRK00087, PRK00087, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed. Length = 647
 Score =  344 bits (884), Expect = 5e-95
 Identities = 145/344 (42%), Positives = 218/344 (63%), Gaps = 5/344 (1%)

Query: 29  VTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTP---IKVGDEVEVYVERTENSF 85
           + KG VV + ++ V VDVG K EG IP RE       +    +KVGDE+EV V + E+  
Sbjct: 305 IVKGTVVSVNENEVFVDVGYKSEGVIPLRELTLDEISSLKESVKVGDEIEVKVLKLEDED 364

Query: 86  GEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIR 145
           G  V S+ +A RE  W+++E  F  GE ++G +   VKGG+ VD  G  AFLP S +++ 
Sbjct: 365 GYVVLSKKEADREKAWKELEEAFENGEPVKGKVKEVVKGGLLVDYGGVRAFLPASHVELG 424

Query: 146 PVRDVTPLMHEPQLFEILKMD-KRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGT 204
            V D++    +    +I++ + KRR  +V+SR+A+LEE + +++ E    LEEG V+EG 
Sbjct: 425 YVEDLSEYKGQELEVKIIEFNRKRRKKVVLSRKAILEEEKEKKKEETWNSLEEGDVVEGE 484

Query: 205 VKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHRISLG 264
           VK +TD+G FVD+ GVDGLLHV++I+W R+  PS VL +G ++KV I+ I++E  ++SL 
Sbjct: 485 VKRLTDFGAFVDIGGVDGLLHVSEISWGRVEKPSDVLKVGDEIKVYILDIDKENKKLSLS 544

Query: 265 MKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHP 324
           +K+L  +PW++V++KY  GS V G V  +  +G FVEL+ G++GL HISQISW K+   P
Sbjct: 545 LKKLLPDPWENVEEKYPVGSIVLGKVVRIAPFGAFVELEPGVDGLVHISQISW-KRIDKP 603

Query: 325 SKILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHP 368
             +LS G++V+  ILEV+P  KRI L +K+    P +       
Sbjct: 604 EDVLSEGEEVKAKILEVDPEEKRIRLSIKEVEEEPGDIEKVELE 647