RPSBLAST alignment for GI: 254780456 and conserved domain: PRK00087
>gnl|CDD|178853 PRK00087, PRK00087, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed. Length = 647
Score = 344 bits (884), Expect = 5e-95
Identities = 145/344 (42%), Positives = 218/344 (63%), Gaps = 5/344 (1%)
Query: 29 VTKGIVVGLEKDTVVVDVGLKFEGRIPRREFMGKGQYTP---IKVGDEVEVYVERTENSF 85
+ KG VV + ++ V VDVG K EG IP RE + +KVGDE+EV V + E+
Sbjct: 305 IVKGTVVSVNENEVFVDVGYKSEGVIPLRELTLDEISSLKESVKVGDEIEVKVLKLEDED 364
Query: 86 GEAVFSRDKALREGVWEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEVAFLPRSQIDIR 145
G V S+ +A RE W+++E F GE ++G + VKGG+ VD G AFLP S +++
Sbjct: 365 GYVVLSKKEADREKAWKELEEAFENGEPVKGKVKEVVKGGLLVDYGGVRAFLPASHVELG 424
Query: 146 PVRDVTPLMHEPQLFEILKMD-KRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGT 204
V D++ + +I++ + KRR +V+SR+A+LEE + +++ E LEEG V+EG
Sbjct: 425 YVEDLSEYKGQELEVKIIEFNRKRRKKVVLSRKAILEEEKEKKKEETWNSLEEGDVVEGE 484
Query: 205 VKNITDYGVFVDLSGVDGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQETHRISLG 264
VK +TD+G FVD+ GVDGLLHV++I+W R+ PS VL +G ++KV I+ I++E ++SL
Sbjct: 485 VKRLTDFGAFVDIGGVDGLLHVSEISWGRVEKPSDVLKVGDEIKVYILDIDKENKKLSLS 544
Query: 265 MKQLEKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHP 324
+K+L +PW++V++KY GS V G V + +G FVEL+ G++GL HISQISW K+ P
Sbjct: 545 LKKLLPDPWENVEEKYPVGSIVLGKVVRIAPFGAFVELEPGVDGLVHISQISW-KRIDKP 603
Query: 325 SKILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHP 368
+LS G++V+ ILEV+P KRI L +K+ P +
Sbjct: 604 EDVLSEGEEVKAKILEVDPEEKRIRLSIKEVEEEPGDIEKVELE 647