RPSBLAST alignment for GI: 254780456 and conserved domain: PRK00087
>gnl|CDD|178853 PRK00087, PRK00087, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed. Length = 647
Score = 182 bits (464), Expect = 2e-46
Identities = 106/368 (28%), Positives = 196/368 (53%), Gaps = 32/368 (8%)
Query: 101 WEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEV-AFLPRSQIDIRPVRDVTPLMHEPQL 159
++E + R G+ ++G + + + + VD+ + +P ++ + + + +
Sbjct: 293 MNELEKQIRRGDIVKGTVVSVNENEVFVDVGYKSEGVIPLRELTLDEISSLKESVKVGDE 352
Query: 160 FE--ILKMDKRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDL 217
E +LK++ G +V+S++ E + E+ + E G+ ++G VK + G+ VD
Sbjct: 353 IEVKVLKLEDEDGYVVLSKKEADRE---KAWKELEEAFENGEPVKGKVKEVVKGGLLVDY 409
Query: 218 SGVDGLLHVTDIAWHRILHPSKVLS--IGQQVKVKIIRINQETHR-ISLGMKQL------ 268
GV L A H L + LS GQ+++VKII N++ + + L K +
Sbjct: 410 GGVRAFLP----ASHVELGYVEDLSEYKGQELEVKIIEFNRKRRKKVVLSRKAILEEEKE 465
Query: 269 --EKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSK 326
++ W+ ++ EG V G V LTD+G FV++ G++GL H+S+ISW + PS
Sbjct: 466 KKKEETWNSLE----EGDVVEGEVKRLTDFGAFVDIG-GVDGLLHVSEISWGR-VEKPSD 519
Query: 327 ILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHPPGTEVEGEVKNKTDFGLF 386
+L VG +++V IL+++ K++SL LK+ L +PWE + +P G+ V G+V FG F
Sbjct: 520 VLKVGDEIKVYILDIDKENKKLSLSLKKLLPDPWENVEEKYPVGSIVLGKVVRIAPFGAF 579
Query: 387 IGLDEHLDGMIHLSDLDWNR--PGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQLSG 444
+ L+ +DG++H+S + W R E V++E G+ VKA +L++D ++RI L +K++
Sbjct: 580 VELEPGVDGLVHISQISWKRIDKPEDVLSE---GEEVKAKILEVDPEEKRIRLSIKEVEE 636
Query: 445 SAPDVVDS 452
D+
Sbjct: 637 EPGDIEKV 644