RPSBLAST alignment for GI: 254780456 and conserved domain: PRK00087

>gnl|CDD|178853 PRK00087, PRK00087, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed. Length = 647
 Score =  182 bits (464), Expect = 2e-46
 Identities = 106/368 (28%), Positives = 196/368 (53%), Gaps = 32/368 (8%)

Query: 101 WEKIEAKFRAGERIEGVIFNQVKGGMTVDLNGEV-AFLPRSQIDIRPVRDVTPLMHEPQL 159
             ++E + R G+ ++G + +  +  + VD+  +    +P  ++ +  +  +   +     
Sbjct: 293 MNELEKQIRRGDIVKGTVVSVNENEVFVDVGYKSEGVIPLRELTLDEISSLKESVKVGDE 352

Query: 160 FE--ILKMDKRRGNIVVSRRAVLEESRAEQRSEIVQKLEEGQVIEGTVKNITDYGVFVDL 217
            E  +LK++   G +V+S++    E   +   E+ +  E G+ ++G VK +   G+ VD 
Sbjct: 353 IEVKVLKLEDEDGYVVLSKKEADRE---KAWKELEEAFENGEPVKGKVKEVVKGGLLVDY 409

Query: 218 SGVDGLLHVTDIAWHRILHPSKVLS--IGQQVKVKIIRINQETHR-ISLGMKQL------ 268
            GV   L     A H  L   + LS   GQ+++VKII  N++  + + L  K +      
Sbjct: 410 GGVRAFLP----ASHVELGYVEDLSEYKGQELEVKIIEFNRKRRKKVVLSRKAILEEEKE 465

Query: 269 --EKNPWDDVQDKYVEGSKVSGVVTNLTDYGVFVELQSGIEGLAHISQISWTKKNIHPSK 326
             ++  W+ ++    EG  V G V  LTD+G FV++  G++GL H+S+ISW +    PS 
Sbjct: 466 KKKEETWNSLE----EGDVVEGEVKRLTDFGAFVDIG-GVDGLLHVSEISWGR-VEKPSD 519

Query: 327 ILSVGQQVEVVILEVNPARKRISLGLKQALINPWEEFSKSHPPGTEVEGEVKNKTDFGLF 386
           +L VG +++V IL+++   K++SL LK+ L +PWE   + +P G+ V G+V     FG F
Sbjct: 520 VLKVGDEIKVYILDIDKENKKLSLSLKKLLPDPWENVEEKYPVGSIVLGKVVRIAPFGAF 579

Query: 387 IGLDEHLDGMIHLSDLDWNR--PGEKVIAEYAKGDIVKAVVLDIDVGKERISLGVKQLSG 444
           + L+  +DG++H+S + W R    E V++E   G+ VKA +L++D  ++RI L +K++  
Sbjct: 580 VELEPGVDGLVHISQISWKRIDKPEDVLSE---GEEVKAKILEVDPEEKRIRLSIKEVEE 636

Query: 445 SAPDVVDS 452
              D+   
Sbjct: 637 EPGDIEKV 644