RPSBLAST alignment for GI: 254780456 and conserved domain: cd05686
>gnl|CDD|88441 cd05686, S1_pNO40, S1_pNO40: pNO40 , S1-like RNA-binding domain. pNO40 is a nucleolar protein of unknown function with an N-terminal S1 RNA binding domain, a CCHC type zinc finger, and clusters of basic amino acids representing a potential nucleolar targeting signal. pNO40 was identified through a yeast two-hybrid interaction screen of a human kidney cDNA library using the pinin (pnn) protein as bait. pNO40 is thought to play a role in ribosome maturation and/or biogenesis.. Length = 73
Score = 44.1 bits (104), Expect = 1e-04
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 199 QVIEGTVKNITDYGVFVDLSGV--DGLLHVTDIAWHRILHPSKVLSIGQQVKVKIIRINQ 256
Q+ +G V ++T+YG FV + G GL+H + ++ R+ PS+V+ +G++V VK+I +
Sbjct: 5 QIFKGEVASVTEYGAFVKIPGCRKQGLVHKSHMSSCRVDDPSEVVDVGEKVWVKVIGR-E 63
Query: 257 ETHRISLGMK 266
++ L +
Sbjct: 64 MKDKMKLSLS 73