HHsearch alignment for GI: 254780457 and conserved domain: COG3839

Probab=95.71  E-value=0.0095  Score=37.34  Aligned_cols=100  Identities=20%  Similarity=0.264  Sum_probs=52.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHH----HHHHHH------------HHCCCC
Q ss_conf             8986668778967899999998178356202899999852321011101465----533332------------101112
Q gi|254780457|r   10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEK----MAIKIA------------QNIVLS   73 (217)
Q Consensus        10 iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~----~~~~~~------------~~i~~~   73 (217)
T Consensus        31 f~vllGPSGcGKSTlLr~IA---GLe~p~~G~I~-------i-~g~~vt~l~P~~R~iamVFQ~yALyPhMtV~~Niaf-   98 (338)
T COG3839          31 FVVLLGPSGCGKSTLLRMIA---GLEEPTSGEIL-------I-DGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAF-   98 (338)
T ss_pred             EEEEECCCCCCHHHHHHHHH---CCCCCCCCEEE-------E-CCEECCCCCHHHCCEEEEECCCCCCCCCCHHHHHHH-
T ss_conf             99998999888899999996---88778871599-------9-999999899557888999378301578769997341-


Q ss_pred             CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf             444444320121001111220578999988788887630388462064
Q gi|254780457|r   74 NLDKAQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGR  121 (217)
Q Consensus        74 ~~~~~~lr~~~I~~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGR  121 (217)
T Consensus        99 ~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaR  146 (338)
T COG3839          99 GLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALAR  146 (338)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             664479956888999999998739866773590117725678999987