HHsearch alignment for GI: 254780457 and conserved domain: PRK00131
>PRK00131 aroK shikimate kinase; Reviewed.
Probab=99.65 E-value=2.7e-14 Score=106.27 Aligned_cols=164 Identities=21% Similarity=0.260 Sum_probs=93.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 88189866687789678999999981783562028999998523210111014655333321011124444443201210
Q gi|254780457|r 7 QSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIA 86 (217)
Q Consensus 7 k~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~ 86 (217)
T Consensus 3 ~~~nI~liG~~GsGKTtvgk~LA~~L~~~fiD~D~~Ie~~~------g~si~~if~--~~-G------------------ 55 (175)
T PRK00131 3 KGPNIVLIGMMGAGKSTIGRLLAKRLGYEFIDTDHLIEARA------GKSIPEIFE--EE-G------------------ 55 (175)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH------CCCHHHHHH--HH-C------------------
T ss_conf 99808988899999899999999995969023988999761------699999999--85-8------------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC-----CHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH--CCC
Q ss_conf 01111220578999988788887630388462064-----12556630388689984488889999866776521--113
Q gi|254780457|r 87 NVASQVASIDSVRDALIDIQRSFAQNKLGVILDGR-----DIGTIIFPDARIKFYVTASLDIRARRRYNEMVSRG--EKV 159 (217)
Q Consensus 87 ~~~S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~EGR-----DigTvVfPdA~~KifL~As~e~RA~RR~~el~~~g--~~~ 159 (217)
T Consensus 56 --------e~~FR~~E~~~l~~l~~~~~~VIstGGG~v~~~~~~~~L~~~g~vV~L~~~~e~l~~Rl~~~-~~RPll~~~ 126 (175)
T PRK00131 56 --------EAGFRELEEEVLAELLQRHNLVISTGGGAVLREENRALLRERGTVVYLDASFEELLRRLARD-RNRPLLQTE 126 (175)
T ss_pred --------HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHCCC-CCCCCCCCC
T ss_conf --------89999999999996514798599748982268899999981693799857999999986489-999878899
Q ss_pred C-HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5-6999999999856102367578537997399977898989999999999998740
Q gi|254780457|r 160 D-YVKILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLIDTKLD 215 (217)
Q Consensus 160 ~-~~ev~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~lsi~ev~~~i~~~I~~kl~ 215 (217)
T Consensus 127 ~~~~~l~~l~~~R~---------~~Y~~~Ad~~Idt~~~s~~ei~~~Ii~~L~~~~~ 174 (175)
T PRK00131 127 DPKEKLRALYEERD---------PLYEEVADLTIETDRRSPEEVVNEILELLELLLR 174 (175)
T ss_pred CHHHHHHHHHHHHH---------HHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf 86999999999999---------9897538999989999999999999999999852