HHsearch alignment for GI: 254780457 and conserved domain: PRK04195
>PRK04195 replication factor C large subunit; Provisional.
Probab=97.64 E-value=6.5e-05 Score=50.24 Aligned_cols=30 Identities=23% Similarity=0.614 Sum_probs=25.5
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf 88189866687789678999999981783562
Q gi|254780457|r 7 QSIIIAIDGTAAAGKGVLSRFIALEYGFHYLD 38 (217)
Q Consensus 7 k~~iIaIDGpagsGKsT~ak~lA~~l~~~~ld 38 (217)
T Consensus 41 k~lLL~--GPpGvGKTT~a~~lAk~~g~~viE 70 (403)
T PRK04195 41 KALLLY--GPPGVGKTSLAHALANDYGWEVIE 70 (403)
T ss_pred CEEEEE--CCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 469988--939987999999999984998599