HHsearch alignment for GI: 254780457 and conserved domain: PRK11784

Probab=96.29  E-value=0.046  Score=33.26  Aligned_cols=120  Identities=23%  Similarity=0.317  Sum_probs=66.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
Q ss_conf             89866687789678999999981783562028999998523210111014655333321011124444443201210011
Q gi|254780457|r   10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLDKAQLSSNAIANVA   89 (217)
Q Consensus        10 iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~YR~~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lr~~~I~~~~   89 (217)
T Consensus       139 ~~vl~G~TG~GKT~lL~~L~~-~G~~viDLE-------glA~HRGS~FG~---------------~~~~---QP------  186 (333)
T PRK11784        139 LVVLGGMTGSGKTRLLQALAN-AGAQVLDLE-------GLANHRGSSFGR---------------LGGP---QP------  186 (333)
T ss_pred             CEEEECCCCCCHHHHHHHHHH-CCCCEECHH-------HHHHCCCCCCCC---------------CCCC---CC------
T ss_conf             599867888778999999997-599743389-------886325642358---------------8999---98------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCEEEE--CCCHHHHHHCCC-------CEEEEEECCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             112205789999887888876303884620--641255663038-------86899844888899998667765211135
Q gi|254780457|r   90 SQVASIDSVRDALIDIQRSFAQNKLGVILD--GRDIGTIIFPDA-------RIKFYVTASLDIRARRRYNEMVSRGEKVD  160 (217)
Q Consensus        90 S~iA~~p~VR~~l~~~Qr~~~~~~~g~V~E--GRDigTvVfPdA-------~~KifL~As~e~RA~RR~~el~~~g~~~~  160 (217)
T Consensus       187 s----Qk~FE~~L~~~l~~~~--~~~i~vE~ESr~IG~~~iP~~l~~~M~~a~~i~i~~~~e~Rv~~l~~eY~~~----~  256 (333)
T PRK11784        187 S----QKDFENLLAEALLKLD--PAPIVVEDESRRIGRVHLPEALYEAMQAAPIVEVEAPLEERVERLLEDYVHL----Y  256 (333)
T ss_pred             C----HHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHH----H
T ss_conf             7----8999999999998089--9856996010030671389999999962988999899999999999985289----9


Q ss_pred             HHHHHHHHHHH
Q ss_conf             69999999998
Q gi|254780457|r  161 YVKILEDLRNR  171 (217)
Q Consensus       161 ~~ev~~~i~~R  171 (217)
T Consensus       257 l~~~l~~i~kr  267 (333)
T PRK11784        257 LAEALQRIRKR  267 (333)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999986