HHsearch alignment for GI: 254780457 and conserved domain: PRK13973

>PRK13973 thymidylate kinase; Provisional.
Probab=98.71  E-value=1.1e-06  Score=60.77  Aligned_cols=75  Identities=9%  Similarity=0.135  Sum_probs=44.6

Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHHH------CCCCH-HHH---HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             0388689984488889999866776521------11356-999---9999998561023675785379973999778989
Q gi|254780457|r  129 PDARIKFYVTASLDIRARRRYNEMVSRG------EKVDY-VKI---LEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMD  198 (217)
Q Consensus       129 PdA~~KifL~As~e~RA~RR~~el~~~g------~~~~~-~ev---~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~ls  198 (217)
T Consensus       127 ~~PDlti~LDv~~e~a~~R~~~R~~~~~~dr~E~~~~~f~~kVr~~Y~~la~~---~----------~~r~~vIDa~-~s  192 (216)
T PRK13973        127 VMPDLTLILDIPAEVGLERAAKRRGSETPDRFEKEDLAFHEKRREAFLQIAAQ---E----------PERCVVIDAD-AS  192 (216)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---C----------CCCEEEEECC-CC
T ss_conf             99998999818889999999983577630025564799999999999999985---9----------8878997199-99


Q ss_pred             HHHHHHHHHHHHHHHHHCC
Q ss_conf             8999999999999874069
Q gi|254780457|r  199 IGTMCKVAKGLIDTKLDNS  217 (217)
Q Consensus       199 i~ev~~~i~~~I~~kl~n~  217 (217)
T Consensus       193 ~eeV~~~I~~~v~~~L~e~  211 (216)
T PRK13973        193 PEAVAAEIWAAVDQRLLEA  211 (216)
T ss_pred             HHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999986210