HHsearch alignment for GI: 254780457 and conserved domain: PRK13973
>PRK13973 thymidylate kinase; Provisional.
Probab=98.71 E-value=1.1e-06 Score=60.77 Aligned_cols=75 Identities=9% Similarity=0.135 Sum_probs=44.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHHH------CCCCH-HHH---HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 0388689984488889999866776521------11356-999---9999998561023675785379973999778989
Q gi|254780457|r 129 PDARIKFYVTASLDIRARRRYNEMVSRG------EKVDY-VKI---LEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMD 198 (217)
Q Consensus 129 PdA~~KifL~As~e~RA~RR~~el~~~g------~~~~~-~ev---~~~i~~RD~~D~~R~~sPL~~a~DAi~IDTs~ls 198 (217)
T Consensus 127 ~~PDlti~LDv~~e~a~~R~~~R~~~~~~dr~E~~~~~f~~kVr~~Y~~la~~---~----------~~r~~vIDa~-~s 192 (216)
T PRK13973 127 VMPDLTLILDIPAEVGLERAAKRRGSETPDRFEKEDLAFHEKRREAFLQIAAQ---E----------PERCVVIDAD-AS 192 (216)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---C----------CCCEEEEECC-CC
T ss_conf 99998999818889999999983577630025564799999999999999985---9----------8878997199-99
Q ss_pred HHHHHHHHHHHHHHHHHCC
Q ss_conf 8999999999999874069
Q gi|254780457|r 199 IGTMCKVAKGLIDTKLDNS 217 (217)
Q Consensus 199 i~ev~~~i~~~I~~kl~n~ 217 (217)
T Consensus 193 ~eeV~~~I~~~v~~~L~e~ 211 (216)
T PRK13973 193 PEAVAAEIWAAVDQRLLEA 211 (216)
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999986210