HHsearch alignment for GI: 254780457 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=96.45 E-value=0.002 Score=41.40 Aligned_cols=26 Identities=27% Similarity=0.341 Sum_probs=22.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 81898666877896789999999817
Q gi|254780457|r 8 SIIIAIDGTAAAGKGVLSRFIALEYG 33 (217)
Q Consensus 8 ~~iIaIDGpagsGKsT~ak~lA~~l~ 33 (217)
T Consensus 491 Ge~vaIvG~sGsGKSTL~kll~Gl~~ 516 (694)
T TIGR03375 491 GEKVAIIGRIGSGKSTLLKLLLGLYQ 516 (694)
T ss_pred CCEEEEEECCCCCHHHHHHHHCCCCC
T ss_conf 97899980589878899998556758