HHsearch alignment for GI: 254780457 and conserved domain: cd00267
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.68 E-value=0.028 Score=34.57 Aligned_cols=29 Identities=34% Similarity=0.370 Sum_probs=23.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEECC
Q ss_conf 18986668778967899999998178356202
Q gi|254780457|r 9 IIIAIDGTAAAGKGVLSRFIALEYGFHYLDTG 40 (217)
Q Consensus 9 ~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG 40 (217)
T Consensus 26 e~~~i~G~nGaGKSTLl~~l~gl~---~~~~G 54 (157)
T cd00267 26 EIVALVGPNGSGKSTLLRAIAGLL---KPTSG 54 (157)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC---CCCCC
T ss_conf 799998788999899999995884---79962