HHsearch alignment for GI: 254780457 and conserved domain: cd02030
>cd02030 NDUO42 NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.
Probab=98.88 E-value=6.3e-08 Score=68.24 Aligned_cols=29 Identities=38% Similarity=0.752 Sum_probs=26.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf 89866687789678999999981783562
Q gi|254780457|r 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLD 38 (217)
Q Consensus 10 iIaIDGpagsGKsT~ak~lA~~l~~~~ld 38 (217)
T Consensus 1 iI~IEGnIG~GKTTl~~~La~~l~~~~~~ 29 (219)
T cd02030 1 VITVDGNIASGKGKLAKELAEKLGMKYFP 29 (219)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 98996785679999999999985982103