HHsearch alignment for GI: 254780457 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=94.75 E-value=0.027 Score=34.60 Aligned_cols=31 Identities=35% Similarity=0.421 Sum_probs=23.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCH
Q ss_conf 8189866687789678999999981783562028
Q gi|254780457|r 8 SIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGL 41 (217)
Q Consensus 8 ~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~ 41 (217)
T Consensus 26 ge~~~l~G~NGsGKTTl~~~l~G~~---~~~~G~ 56 (144)
T cd03221 26 GDRIGLVGRNGAGKSTLLKLIAGEL---EPDEGI 56 (144)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC---CCCCEE
T ss_conf 9999999899984999999984898---898509