>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=95.59  E-value=0.011  Score=36.90  Aligned_cols=34  Identities=21%  Similarity=0.243  Sum_probs=25.8

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHH
Q ss_conf             5881898666877896789999999817835620289
Q gi|254780457|r    6 SQSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLI   42 (217)
Q Consensus         6 ~k~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~   42 (217)
T Consensus        23 ~~GEiv~ilGpNGaGKSTllk~i~---G~l~p~~G~i   56 (177)
T cd03222          23 KEGEVIGIVGPNGTGKTTAVKILA---GQLIPNGDND   56 (177)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHH---CCCCCCCCCE
T ss_conf             899899998999999999999996---8867889946