HHsearch alignment for GI: 254780457 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=96.07 E-value=0.0054 Score=38.81 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=26.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHH
Q ss_conf 818986668778967899999998178356202899
Q gi|254780457|r 8 SIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIY 43 (217)
Q Consensus 8 ~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~Y 43 (217)
T Consensus 27 Ge~v~i~G~sGsGKSTLl~~l~---Gl~~~~~G~i~ 59 (166)
T cd03223 27 GDRLLITGPSGTGKSSLFRALA---GLWPWGSGRIG 59 (166)
T ss_pred CCEEEEECCCCCCHHHHHHHHC---CCCCCCCCEEE
T ss_conf 9999999589998899999986---98769986799