>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.75  E-value=0.00056  Score=44.65  Aligned_cols=33  Identities=39%  Similarity=0.571  Sum_probs=26.9

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHH
Q ss_conf             818986668778967899999998178356202899
Q gi|254780457|r    8 SIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIY   43 (217)
Q Consensus         8 ~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~Y   43 (217)
T Consensus        26 Ge~~~ivGpSG~GKSTllr~i~---Gl~~p~~G~I~   58 (178)
T cd03229          26 GEIVALLGPSGSGKSTLLRCIA---GLEEPDSGSIL   58 (178)
T ss_pred             CCEEEEECCCCCHHHHHHHHHH---CCCCCCCEEEE
T ss_conf             9899999999983999999998---59999963999