>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=96.14  E-value=0.0061  Score=38.48  Aligned_cols=34  Identities=15%  Similarity=0.290  Sum_probs=25.5

Q ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECC
Q ss_conf             5558818986668778967899999998178356202
Q gi|254780457|r    4 LESQSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTG   40 (217)
Q Consensus         4 ~~~k~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG   40 (217)
T Consensus        22 ipk~GEi~gLiGpNGaGKSTLlk~i~Gll---~P~~G   55 (255)
T cd03236          22 VPREGQVLGLVGPNGIGKSTALKILAGKL---KPNLG   55 (255)
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHCCC---CCCCC
T ss_conf             89898099998999970999999996798---68875