HHsearch alignment for GI: 254780457 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=96.28 E-value=0.0038 Score=39.72 Aligned_cols=26 Identities=31% Similarity=0.409 Sum_probs=22.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 88189866687789678999999981
Q gi|254780457|r 7 QSIIIAIDGTAAAGKGVLSRFIALEY 32 (217)
Q Consensus 7 k~~iIaIDGpagsGKsT~ak~lA~~l 32 (217)
T Consensus 29 ~G~~v~ivG~sGsGKSTLl~ll~gl~ 54 (220)
T cd03245 29 AGEKVAIIGRVGSGKSTLLKLLAGLY 54 (220)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999999985999999996725