>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.20  E-value=0.0039  Score=39.66  Aligned_cols=33  Identities=39%  Similarity=0.578  Sum_probs=25.5

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHH
Q ss_conf             881898666877896789999999817835620289
Q gi|254780457|r    7 QSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLI   42 (217)
Q Consensus         7 k~~iIaIDGpagsGKsT~ak~lA~~l~~~~ldtG~~   42 (217)
T Consensus        23 ~Ge~~~ilGpSGsGKSTLl~li~---Gl~~p~sG~I   55 (211)
T cd03298          23 QGEITAIVGPSGSGKSTLLNLIA---GFETPQSGRV   55 (211)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHH---CCCCCCCEEE
T ss_conf             99899999999955999999997---6999885299