RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddA
21,609 sequences; 6,263,737 total letters
Searching..................................................done
Query= gi|254780457|ref|YP_003064870.1| cytidylate kinase [Candidatus
Liberibacter asiaticus str. psy62]
(217 letters)
>gnl|CDD|30631 COG0283, Cmk, Cytidylate kinase [Nucleotide transport and
metabolism].
Length = 222
Score = 201 bits (512), Expect = 2e-52
Identities = 87/221 (39%), Positives = 138/221 (62%), Gaps = 11/221 (4%)
Query: 6 SQSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIK 65
+IIIAIDG A +GK +++ +A + GFHYLDTG +YRAVA L G+ LDDE +
Sbjct: 2 KAAIIIAIDGPAGSGKSTVAKILAEKLGFHYLDTGAMYRAVALAALKHGVDLDDEDALVA 61
Query: 66 IAQNIVLSNLDKAQ-----------LSSNAIANVASQVASIDSVRDALIDIQRSFAQNKL 114
+A+ + +S ++ + + + + N AS+VA+I VR+AL+ +QR+FA+N
Sbjct: 62 LAKELDISFVNDDRVFLNGEDVSEEIRTEEVGNAASKVAAIPEVREALVKLQRAFAKNGP 121
Query: 115 GVILDGRDIGTIIFPDARIKFYVTASLDIRARRRYNEMVSRGEKVDYVKILEDLRNRDNQ 174
G++ DGRDIGT++FPDA +K ++TAS + RA RRY ++ ++G + ++L +++ RD +
Sbjct: 122 GIVADGRDIGTVVFPDAELKIFLTASPEERAERRYKQLQAKGFSEVFEELLAEIKERDER 181
Query: 175 DRNRSYCPLVRDKDAYFFDTSEMDIGTMCKVAKGLIDTKLD 215
D NR+ PL +DA DTS + I + + LI KL
Sbjct: 182 DSNRAVAPLKPAEDALLLDTSSLSIEEVVEKILELIRQKLA 222
>gnl|CDD|73296 cd02020, CMPK, Cytidine monophosphate kinase (CMPK) catalyzes the
reversible phosphorylation of cytidine monophosphate
(CMP) to produce cytidine diphosphate (CDP), using ATP
as the preferred phosphoryl donor..
Length = 147
Score = 142 bits (359), Expect = 1e-34
Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 39/186 (20%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQN 69
IIAIDG A +GK +++ +A + G YLDTG I
Sbjct: 1 IIAIDGPAGSGKSTVAKLLAKKLGLPYLDTGGI--------------------------- 33
Query: 70 IVLSNLDKAQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFP 129
+ + +AS+VA+I VR AL + QR A+ G++L+GRDIGT++FP
Sbjct: 34 -----------RTEEVGKLASEVAAIPEVRKALDERQRELAKKP-GIVLEGRDIGTVVFP 81
Query: 130 DARIKFYVTASLDIRARRRYNEMVSRGEKVDYVKILEDLRNRDNQDRNRSYCPLVRDKDA 189
DA +K ++TAS ++RA+RR ++ ++GE VD +IL ++ RD +D R PL +DA
Sbjct: 82 DADLKIFLTASPEVRAKRRAKQLQAKGEGVDLEEILAEIIERDERDSTRYVAPLKLAEDA 141
Query: 190 YFFDTS 195
DTS
Sbjct: 142 IVIDTS 147
>gnl|CDD|111151 pfam02224, Cytidylate_kin, Cytidylate kinase. Cytidylate kinase
EC:2.7.4.14 catalyses the phosphorylation of cytidine
5'-monophosphate (dCMP) to cytidine 5'-diphosphate
(dCDP) in the presence of ATP or GTP.
Length = 158
Score = 123 bits (311), Expect = 4e-29
Identities = 49/121 (40%), Positives = 85/121 (70%), Gaps = 1/121 (0%)
Query: 79 QLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTIIFPDARIKFYVT 138
++ + +AN AS+VA+I +VR L+ +QR A+N ++++GRDIGT++FPDA +K ++T
Sbjct: 30 EIRTQEVANAASEVAAIPAVRAILVKLQRQLAKNG-NIVMEGRDIGTVVFPDAEVKIFLT 88
Query: 139 ASLDIRARRRYNEMVSRGEKVDYVKILEDLRNRDNQDRNRSYCPLVRDKDAYFFDTSEMD 198
AS + RA+RRY ++ ++G VD ++L +++ RD +D R+ PL +DA + DTS++
Sbjct: 89 ASPEERAKRRYKQLQAKGSAVDLEELLAEIKRRDKRDSERAVGPLKPAEDALYIDTSDLT 148
Query: 199 I 199
I
Sbjct: 149 I 149
>gnl|CDD|31299 COG1102, Cmk, Cytidylate kinase [Nucleotide transport and
metabolism].
Length = 179
Score = 51.8 bits (124), Expect = 1e-07
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 9 IIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQ 68
++I I G +GK ++R +A G + G I+R +A+ + G+SL++
Sbjct: 1 MVITISGLPGSGKTTVARELAEHLGLKLVSAGTIFREMAR---ERGMSLEE--------- 48
Query: 69 NIVLSNLDKAQLSSNAIANVASQVASIDSVRDALID-IQRSFAQNKLGVILDGRDIGTII 127
S+ A D D ID Q+ A+ V+L+GR G I+
Sbjct: 49 --------------------FSRYAEEDPEIDKEIDRRQKELAKEG-NVVLEGRLAGWIV 87
Query: 128 FPDARIKFYVTASLDIRARRRYNEMVSRGEKVDYVKILEDLRNRDNQDRNR 178
A +K ++ A L++RA R +++ E +D + L + R+ ++ R
Sbjct: 88 REYADLKIWLKAPLEVRAER-----IAKREGIDVDEALAETVEREESEKKR 133
>gnl|CDD|30909 COG0563, Adk, Adenylate kinase and related kinases [Nucleotide
transport and metabolism].
Length = 178
Score = 39.1 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 11 IAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNI 70
I I G AGK L++ +A + G +LDTG I RA ++ +I + I
Sbjct: 3 ILILGPPGAGKSTLAKKLAKKLGLPHLDTGDILRAAIAE---------RTELGEEIKKYI 53
Query: 71 VLSNLDKAQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDG 120
DK +L D + + L+ + A K G ILDG
Sbjct: 54 -----DKGEL-------------VPDEIVNGLVKERLDEADCKAGFILDG 85
>gnl|CDD|39080 KOG3877, KOG3877, KOG3877, NADH:ubiquinone oxidoreductase,
NDUFA10/42kDa subunit [Energy production and
conversion].
Length = 393
Score = 33.1 bits (75), Expect = 0.067
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 3 RLESQSIIIAIDGTAAAGKGVLSRFIALEYGFHY---LDTGLIY 43
R S +I ++G +GK L++ +A + GF + IY
Sbjct: 66 RFHENSKVIVVEGNIGSGKTKLAKELAEQLGFVHFPEFRMDDIY 109
>gnl|CDD|30191 cd01673, dNK, Deoxyribonucleoside kinase (dNK) catalyzes the
phosphorylation of deoxyribonucleosides to yield
corresponding monophosphates (dNMPs). This family
consists of various deoxynucleoside kinases including
deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC
2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC
2.7.1.21) kinases. They are key enzymes in the salvage
of deoxyribonucleosides originating from extra- or
intracellular breakdown of DNA..
Length = 193
Score = 32.5 bits (74), Expect = 0.078
Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 27/203 (13%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQN 69
+I ++G AGK L++ +A G+ + + L+ D ++ A
Sbjct: 1 VIVVEGNIGAGKSTLAKELAEHLGYEVVPEPVEPDVEGNPFLEKFYE-DPKRWAFPFQLY 59
Query: 70 IVLSNLDKAQLSSNAIANVASQVA--SIDSVRDALIDIQRSFAQNKLGVILD------GR 121
+LS L + + + ++ + SI S D + + D
Sbjct: 60 FLLSRLKQYKDALEHLSTGQGVILERSIFS--DRVFAEANLKEGGIMKTEYDLYNELFDN 117
Query: 122 DIGTIIFPDARIKFYVTASLD-----IRARRRYNEMVSRGEKVDYVKILEDLRNRDNQDR 176
I ++ PD I Y+ AS + I+ R R E G +DY++ L + + +
Sbjct: 118 LIPELLPPDLVI--YLDASPETCLKRIKKRGRPEEQ---GIPLDYLEDLHEAYEKWFLPQ 172
Query: 177 NRSYCPLVRDKDAYFFDTSEMDI 199
P++ D +E DI
Sbjct: 173 MYEKAPVLI------IDANEADI 189
>gnl|CDD|30189 cd01428, ADK, Adenylate kinase (ADK) catalyzes the reversible
phosphoryl transfer from adenosine triphosphates (ATP)
to adenosine monophosphates (AMP) and to yield
adenosine diphosphates (ADP). This enzyme is required
for the biosynthesis of ADP and is essential for
homeostasis of adenosine phosphates..
Length = 194
Score = 31.7 bits (72), Expect = 0.13
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRA----------VAKNILDAGISLDD 59
I + G +GKG + +A +YG ++ TG + R AK +D+G + D
Sbjct: 1 RILLLGPPGSGKGTQAERLAKKYGLPHISTGDLLREEIASGTELGKKAKEYIDSGKLVPD 60
Query: 60 E 60
E
Sbjct: 61 E 61
>gnl|CDD|30019 cd02569, PseudoU_synth_ScPus3, PseudoU_synth_ScPus3-like:
Pseudouridine synthase, Saccharomyces cerevisiae Pus3
like. This group consists of eukaryotic pseudouridine
synthases similar to S. cerevisiae Pus3p, mouse Pus3p
and, human PUS2. Pseudouridine synthases catalyze the
isomerization of specific uridines in an RNA molecule to
pseudouridines (5-ribosyluracil, psi). No cofactors are
required. S. cerevisiae Pus3p makes psi38 and psi39 in
tRNAs. Mouse Pus3p has been shown to makes psi38 and,
possibly also psi 39, in tRNAs. Psi38 and psi39 are
highly conserved in tRNAs from eubacteria, archea and
eukarya..
Length = 256
Score = 31.0 bits (70), Expect = 0.27
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 21/92 (22%)
Query: 138 TASLDIRARRR---------YNEMVSRGEKVDYVKILEDLRNRDNQDRNRSYCPLVRDKD 188
SLD+R+ + + + E++ Y KIL + D R ++ P+ D
Sbjct: 61 VISLDVRSNLKPEDGLDPSTDVKSTADEEELPYCKILNRVLPPD--IRILAWAPVPPDFS 118
Query: 189 A----------YFFDTSEMDIGTMCKVAKGLI 210
A YFF ++DI M K AK L+
Sbjct: 119 ARFSCVSRTYRYFFPKGDLDIELMRKAAKLLL 150
>gnl|CDD|144120 pfam00406, ADK, Adenylate kinase.
Length = 186
Score = 30.4 bits (69), Expect = 0.43
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 10/50 (20%)
Query: 15 GTAAAGKGVLSRFIALEYGFHYLDTGLIYRA----------VAKNILDAG 54
G AGKG + I +YG +L TG + RA AK +D G
Sbjct: 3 GPPGAGKGTQAERIVQKYGIVHLSTGDLLRAEVKSGTELGKEAKEYMDKG 52
>gnl|CDD|30203 cd02030, NDUO42, NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42)
is a family of proteins that are highly similar to
deoxyribonucleoside kinases (dNK). Members of this
family have been identified as one of the subunits of
NADH:Ubiquinone oxioreductase (complex I), a
multi-protein complex located in the inner
mitochondrial membrane. The main function of the
complex is to transport electrons from NADH to
ubiquinone, which is accompanied by the translocation
of protons from the mitochondrial matrix to the inter
membrane space..
Length = 219
Score = 29.4 bits (66), Expect = 0.72
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHY 36
+I +DG A+GKG L++ +A + G Y
Sbjct: 1 VITVDGNIASGKGKLAKELAEKLGMKY 27
>gnl|CDD|37862 KOG2651, KOG2651, KOG2651, rRNA adenine N-6-methyltransferase [RNA
processing and modification].
Length = 476
Score = 28.4 bits (63), Expect = 1.6
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 19 AGKGVLSRFIALEYGFHYL----DTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLS 73
AG+G LSRF++L YG L+ RA LD + L K + Q + S
Sbjct: 162 AGQGHLSRFLSLGYGLSVKAIEGSQRLVERA---QRLDKHLLLAMAKEGKRNPQVVQKS 217
>gnl|CDD|30194 cd02021, GntK, Gluconate kinase (GntK) catalyzes the phosphoryl
transfer from ATP to gluconate. The resulting product
gluconate-6-phoshate is an important precursor of
gluconate metabolism. GntK acts as a dimmer composed of
two identical subunits..
Length = 150
Score = 28.3 bits (63), Expect = 1.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDE 60
II + G + +GK + + +A G ++D ++ + AGI L+DE
Sbjct: 1 IIVVMGVSGSGKSTVGKALAERLGAPFIDGDDLHPPANIAKMAAGIPLNDE 51
>gnl|CDD|30917 COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism].
Length = 218
Score = 28.3 bits (63), Expect = 1.8
Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 28/175 (16%)
Query: 1 MGRLESQSIIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLI-----YRAVAKNILDAGI 55
M + + III I G + +GK +++ ++ + G +I Y+ + +
Sbjct: 1 MMKKPEKVIIIGIAGGSGSGKTTVAKELSEQLGVE--KVVVISLDDYYKDQSHLPFEERN 58
Query: 56 SLD-DEKMAIKIAQNIVLSNLDKAQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKL 114
++ D A + +L L + + D N +
Sbjct: 59 KINYDHPEAFDL-------DLLIEHL-KDLKQGKPVDLPVYDYKTHTREPETIKVEPNDV 110
Query: 115 GVILDGRDIGTIIFPDARI------KFYVTASLDIRARRR-YNEMVSRGEKVDYV 162
VI++ G ++ D R+ K +V D+R RR ++ RG ++ V
Sbjct: 111 -VIVE----GILLLYDERLRDLMDLKIFVDTDADVRLIRRIKRDVQERGRDLESV 160
>gnl|CDD|30586 COG0237, CoaE, Dephospho-CoA kinase [Coenzyme metabolism].
Length = 201
Score = 28.0 bits (62), Expect = 2.3
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 9 IIIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAV 46
+II + G +GK +++ +A E GF +D + R V
Sbjct: 3 LIIGLTGGIGSGKSTVAKILA-ELGFPVIDADDVAREV 39
>gnl|CDD|36870 KOG1657, KOG1657, KOG1657, CCAAT-binding factor, subunit C (HAP5)
[Transcription].
Length = 236
Score = 27.4 bits (60), Expect = 3.0
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 9/92 (9%)
Query: 77 KAQLSSNAIANVASQVASIDSVRDALIDIQR--SFAQNKLGVILDGRDIGTIIFPDARIK 134
+ + A + S+ + Q+ SF + D I P ARIK
Sbjct: 22 APPKGAKSEPEGAVCLDPEASIITGDVSRQQLQSFWSKQAIEKEGQLDFKNHILPLARIK 81
Query: 135 FYVTASLDIRARRRYNEMVSRGEKVDYVKILE 166
+ + D+ M++ V + K E
Sbjct: 82 KIMKSDEDVS-------MITAEAPVLFAKACE 106
>gnl|CDD|38289 KOG3079, KOG3079, KOG3079, Uridylate kinase/adenylate kinase
[Nucleotide transport and metabolism].
Length = 195
Score = 27.1 bits (60), Expect = 3.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKN 49
II + G +GKG I +YGF +L G + RA +
Sbjct: 10 IIFVLGGPGSGKGTQCEKIVEKYGFTHLSAGDLLRAEIAS 49
>gnl|CDD|36238 KOG1020, KOG1020, KOG1020, Sister chromatid cohesion protein
SCC2/Nipped-B [Chromatin structure and dynamics, Cell
cycle control, cell division, chromosome partitioning,
Replication, recombination and repair].
Length = 1692
Score = 26.5 bits (58), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 24 LSRFIAL--EYGFHYLDTGLIYRAVAKNILDAGISLDDEKMAIKIAQNIVLSNLD 76
+ RF+ E F Y Y + + ILD G+S+ K IKI ++I D
Sbjct: 879 VGRFVLSIPELIFQY------YDQIIERILDTGVSV--RKRVIKILRDICEETPD 925
>gnl|CDD|38564 KOG3354, KOG3354, KOG3354, Gluconate kinase [Carbohydrate
transport and metabolism].
Length = 191
Score = 26.5 bits (58), Expect = 6.0
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHYLDTGLIYRAVAKNILDAGISLDDEKMA--IKIA 67
+I + G + +GK + + ++ E G ++D ++ + GI L+D+ +K
Sbjct: 14 VIVVMGVSGSGKSTIGKALSEELGLKFIDGDDLHPPANVEKMTQGIPLNDDDRWPWLKKI 73
Query: 68 QNIVLSNLDKAQLS 81
+ L Q
Sbjct: 74 AVELRKALASGQGV 87
>gnl|CDD|30672 COG0324, MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase
[Translation, ribosomal structure and biogenesis].
Length = 308
Score = 26.4 bits (58), Expect = 6.2
Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 27/166 (16%)
Query: 10 IIAIDGTAAAGKGVLSRFIALEYGFHY--LDTGLIYRAVAKNILDAGISLDDEKMAIKIA 67
+I I G A+GK L+ +A G LD+ +YR + +I A SL++
Sbjct: 5 LIVIAGPTASGKTALAIALAKRLGGEIISLDSMQVYRGL--DIGTAKPSLEELAGVPHHL 62
Query: 68 QNIVLSNLDKAQLSSNAIANVASQVASIDSVRDALIDIQRSFAQNKLGVILDGRDIGTII 127
+I + ++ + RDAL I A+ KL IL G GT +
Sbjct: 63 IDIR---------------DPTESYSAAEFQRDALAAIDDILARGKL-PILVG---GTGL 103
Query: 128 FPDARIK-FYVTASLDIRARRRYNEMVSRGEKVDYVKILEDLRNRD 172
+ A ++ + D RRR ++ + +L+ D
Sbjct: 104 YLKALLEGLSLLPEADPEVRRRLEA---ELAELGNDALHAELKKID 146
>gnl|CDD|147414 pfam05206, TRM13, Methyltransferase TRM13. This is a family of
eukaryotic proteins which are responsible for
2'-O-methylation of tRNA at position 4. TRM13 shows no
sequence similarity to other known methyltransferases.
Length = 256
Score = 26.1 bits (58), Expect = 6.8
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 19 AGKGVLSRFIALEYGFHYLDT---GLIYRAVAKNILDAGISLDDEKMAIK-IAQNIVLSN 74
AGKG LSR++ L LI RA + D I DE IK + +I N
Sbjct: 27 AGKGELSRYLNQCLLEDQLSNPGFVLIDRASNRLKADRKIR-KDESPPIKRLRIDIKDLN 85
Query: 75 LDKAQLSSNAIANVA 89
LDK VA
Sbjct: 86 LDKLLSLLKGKPVVA 100
>gnl|CDD|31438 COG1245, COG1245, Predicted ATPase, RNase L inhibitor (RLI) homolog
[General function prediction only].
Length = 591
Score = 25.9 bits (57), Expect = 7.7
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 183 LVRDKDAYFFD--TSEMDIGTMCKVAK 207
L+RD D YFFD +S +DI A+
Sbjct: 228 LLRDADVYFFDEPSSYLDIRQRLNAAR 254
>gnl|CDD|133360 cd04160, Arfrp1, Arfrp1 subfamily. Arfrp1 (Arf-related protein 1),
formerly known as ARP, is a membrane-associated Arf
family member that lacks the N-terminal myristoylation
motif. Arfrp1 is mainly associated with the trans-Golgi
compartment and the trans-Golgi network, where it
regulates the targeting of Arl1 and the GRIP
domain-containing proteins, golgin-97 and golgin-245,
onto Golgi membranes. It is also involved in the
anterograde transport of the vesicular stomatitis virus
G protein from the Golgi to the plasma membrane, and in
the retrograde transport of TGN38 and Shiga toxin from
endosomes to the trans-Golgi network. Arfrp1 also
inhibits Arf/Sec7-dependent activation of phospholipase
D. Deletion of Arfrp1 in mice causes embryonic
lethality at the gastrulation stage and apoptosis of
mesodermal cells, indicating its importance in
development.
Length = 167
Score = 25.7 bits (57), Expect = 9.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 120 GRDIGTIIFPDARIKFY 136
G +IGTI +AR+KF+
Sbjct: 39 GLNIGTIEVGNARLKFW 55
Database: CddA
Posted date: Feb 4, 2011 9:38 PM
Number of letters in database: 6,263,737
Number of sequences in database: 21,609
Lambda K H
0.321 0.137 0.376
Gapped
Lambda K H
0.267 0.0662 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 2,416,508
Number of extensions: 124558
Number of successful extensions: 362
Number of sequences better than 10.0: 1
Number of HSP's gapped: 358
Number of HSP's successfully gapped: 42
Length of query: 217
Length of database: 6,263,737
Length adjustment: 90
Effective length of query: 127
Effective length of database: 4,318,927
Effective search space: 548503729
Effective search space used: 548503729
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.1 bits)