HHsearch alignment for GI: 254780458 and conserved domain: COG0128
>COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=749.56 Aligned_cols=411 Identities=33% Similarity=0.501 Sum_probs=376.7
Q ss_pred EECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCC
Q ss_conf 70688536999818422289999999974498499977980289999999999849799998998999812688756853
Q gi|254780458|r 12 SSYSCGLQGTICIPGDRSLSHFSIILGGIAAGETQIRGVLESDDVLNTMRMMHYLGARFTKKDREWIVQGVGNGCLLSPE 91 (449)
Q Consensus 12 ~~~~~~L~G~i~vp~SKs~s~RaLl~AaLa~g~s~i~n~~~s~Dv~~~l~al~~LG~~i~~~~~~~~i~g~g~~~~~~~~ 91 (449)
T Consensus 7 ~~~~~~l~G~v~~PgSKSishRalilaaLA~g~s~i~~~L~s~D~~~tl~a~~~lG~~i~~~~~~~~v~g~g~-~~~~~~ 85 (428)
T COG0128 7 VVKPSPLRGTVRAPGSKSISHRALLLAALAEGESTITNLLDSEDTLATLEALRALGARIEKEGDTLVVRGTGG-ELKEPP 85 (428)
T ss_pred CCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCEEECCCCEEEEECCCC-CCCCCC
T ss_conf 4557765169978998238999999998728965994322568699999999970874885587799967988-757997
Q ss_pred CEEEECCCCCCCCEEEEECCC-CCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECC-CCCCCCEEECCCCCCCEEEEE
Q ss_conf 105503333322001343145-531033123333344654210101231274101013-432220120222111113430
Q gi|254780458|r 92 YPLDFKGFDMGYGLMMGVVGV-YDFQTFFKGRAEILQPTIESLLAPLYQMGVQVKLPE-DKRLPLVLHGPRTPNPIVYKS 169 (449)
Q Consensus 92 ~~i~~~~sgt~~r~l~~~l~~-~~~~~~i~G~~~l~~Rpi~~li~~L~~lGa~i~~~~-~~~~Pi~I~g~~~~~~~~~~~ 169 (449)
T Consensus 86 ~~l~~GnSGTt~R~l~glla~~~~~~~~l~Gd~sl~~RPm~~l~~aLr~~Ga~i~~~~~~~~~Pl~i~G~~~~~~i~i~~ 165 (428)
T COG0128 86 AVLDCGNSGTTLRLLTGLLALGSPGETVLTGDESLRKRPMGPLVDALRQLGAKIDGREGEGYLPLTIKGGLKGGEVEIDG 165 (428)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCEEEEEC
T ss_conf 44560562658999999996178970999878323109767889999977968994688886787997787785289845
Q ss_pred CCCCCCCCCEEHHHHHCCCCCCCC-CCCCCCCCHHHH---HHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCH
Q ss_conf 234443320000000000112223-465454424444---6654497344411333100267528651023320023211
Q gi|254780458|r 170 PMDSVQSKSVVLLAGLNTPGITEV-IEPVKTQDHMEI---ILKEFGVDLLIKSDTIEDYSVRIEGRKRISGCNLKIPGDS 245 (449)
Q Consensus 170 ~~~S~q~~s~lLlA~~~~~g~t~i-~~~~~s~~~i~~---~L~~fG~~i~~~~~~~~~~~i~i~g~~~l~~~~~~Ip~D~ 245 (449)
T Consensus 166 ~~SSq~vsslL~~a~l~~~~~~~~~~~~~~s~~yid~T~~mL~~FGv~v~~~~----~-~~~i~~g~~~~~~~~~VpgD~ 240 (428)
T COG0128 166 PVSSQQVSSLLLLAPLLAEGTTIIVGGVLESKPYIDHTLDMLKAFGVEVENEG----Y-RFYIPGGQKLTPGDYDVPGDY 240 (428)
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEC----C-EEEECCCCCCCCCEEECCCCH
T ss_conf 65079999999987625898389845756776679999999998698389604----3-899889862167547827972
Q ss_pred HHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCEEEEEEC-CCCCCCCCCCCCC
Q ss_conf 22100000112255653-222333232222222100000134323444227870343202564202-3332346443543
Q gi|254780458|r 246 SIAFFPLAAALLIPGSD-IKLLNVLTNPLRVGIIDILREMGADITLSNSRIESGENIADIRVRFSK-IKGITISDNRLRS 323 (449)
Q Consensus 246 ssAa~~la~a~l~~g~~-i~i~n~~~~~~q~~~ldiL~~mG~~i~~~~~~~~~~~~~~~i~~~~~~-l~g~~i~~~~~~~ 323 (449)
T Consensus 241 SSAafflaAaai~~~~~~i~~~~v~~~~~~~~~~~vl~~MGa~i~~~~~~~--------l~V~~~~~l~gi~vd---~~~ 309 (428)
T COG0128 241 SSAAFFLAAAAITPRSTGITLKNVQPNPTDKGILDVLEKMGADIEIGDDSV--------LRVRGSGELKGIEVD---MDD 309 (428)
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCE--------EEEEECCCCCCEEEC---CCC
T ss_conf 669999999984278750450157768660489999997599179746834--------999625875676767---543
Q ss_pred CHHHCCCCCCCCCCCCCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCC-EEECCC
Q ss_conf 011101112322223474100272001--24568999999997469789998895999767887666656872-660488
Q gi|254780458|r 324 IVDEYPILLVISAFAEGETIIKGLAEV--MTSKQFSGIIECFNINNIQYEREGDYLMIKGVPGGKGLGCSTGH-MVQSKF 400 (449)
Q Consensus 324 ~~D~~p~Lavla~~a~G~t~i~gi~~l--kesdRi~~~~~~L~~~G~~~~~~~d~l~I~G~~~~~~~~~~~~~-~v~s~~ 400 (449)
T Consensus 310 ~pD~~p~lAvlAa~A~g~t~I~n~~~lRvKEsDRi~a~a~eL~klG~~v~e~~Dgl~I~g~~~------l~g~~~v~s~~ 383 (428)
T COG0128 310 MPDLAPTLAVLAAFAEGTTRIRNAEELRVKESDRIAAMATELRKLGVEVEETEDGLIITGGTK------LKGAGTVDSYG 383 (428)
T ss_pred CCHHHHHHHHHHHHCCCCEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCC------CCCCCCCCCCC
T ss_conf 822789999999854797699765773203024799999999965867786488389978987------89985104768
Q ss_pred CHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHHHHHCCCEE
Q ss_conf 458999999999735995899445430277869888998659789
Q gi|254780458|r 401 GYRVAMSFLVMGLASEYSVVVDDYTMISTIFPDFINLMKTLGARI 445 (449)
Q Consensus 401 DHRiaMa~~i~gl~~~~~~~I~~~~~v~ksyP~F~~~l~~LGa~i 445 (449)
T Consensus 384 DHRiaMa~aia~l~~~~~v~I~~~~~v~kSfP~F~~~l~~l~~~~ 428 (428)
T COG0128 384 DHRIAMAFAVAGLLSEGGVRIDDAECVAKSFPGFFEDLASLGARI 428 (428)
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHHHHHCCC
T ss_conf 689999999999605897897274610345843999999842779