HHsearch alignment for GI: 254780458 and conserved domain: LOAD_rna_Cyc

Probab=91.15  E-value=0.69  Score=24.63  Aligned_cols=119  Identities=14%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             HHHHHHHCCCCEEEECCCCHH-------HHHHHHHHHHHC-CCEEEEE-CCEEEEEECCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             999997449849997798028-------999999999984-9799998-9989998126887568531055033333220
Q gi|254780458|r   34 SIILGGIAAGETQIRGVLESD-------DVLNTMRMMHYL-GARFTKK-DREWIVQGVGNGCLLSPEYPLDFKGFDMGYG  104 (449)
Q Consensus        34 aLl~AaLa~g~s~i~n~~~s~-------Dv~~~l~al~~L-G~~i~~~-~~~~~i~g~g~~~~~~~~~~i~~~~sgt~~r  104 (449)
T Consensus        16 alaLS~itg~pi~I~nIRa~R~~PGL~~Qhl~~l~l~~~i~~a~~~g~~~gst~l~F~-Pg~i~~g~~~~d~gtAgsi~L   94 (329)
T LOAD_rna_Cyc     16 ALALSTLTGKPVRIENIRANRPKPGLKPQHLSAVRLLKRITNATVEGAELGSTELEFR-PGKITGGVYRFDIGTAGSITL   94 (329)
T ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEE-CCCCCCCCEEEECCCCCCHHH
T ss_conf             9999997689879997347998988679999999999997097681325386589997-986468727995698700799


Q ss_pred             EE---EEECCCCCCE--EEECCCCCC-CCCCCCCEEE----EEEECCCCEEE--CCCCCCC
Q ss_conf             01---3431455310--331233333-4465421010----12312741010--1343222
Q gi|254780458|r  105 LM---MGVVGVYDFQ--TFFKGRAEI-LQPTIESLLA----PLYQMGVQVKL--PEDKRLP  153 (449)
Q Consensus       105 ~l---~~~l~~~~~~--~~i~G~~~l-~~Rpi~~li~----~L~~lGa~i~~--~~~~~~P  153 (449)
T Consensus        95 ~LQ~lLp~~~f~~~~~~l~l~GGT~v~~sPsvDy~~~v~lP~l~~fG~~~~l~i~rRGfyP  155 (329)
T LOAD_rna_Cyc     95 FLQTLLPLLLFAKGPSKIKLKGGTDVPWAPPVDYLKNVFLPILEKFGVHGELKILKRGFYP  155 (329)
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             9999999996489974999975438999998899999999999976996699998536689